Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                           <---------GLK1(2)                                   <---------CCA1(1)                           <---------AHL20(2)                                   <---------RVE1(1)                           --------->AHL20(2)                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   <---------AHL20(1)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <----------DOF2                --------->AHL20(2)      --------->At4g35610         --------->ARR11(3)                   <-----------GT1 ----ARR14(2)      <-----------GT1<---------ARR11(3)          <-------GAMYB   <---------AHL20(2) --->ARR14(2)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   tttcaagcagatggatagtttttactggtgttttgggatattttagatacttttcagtagtttgggttgtattttaccaatttttttagttaatccaaaa  16017300                                  -------->P                                 ------>MYB83                                 ------>MYB46(1)                                ----------->HVH21                               --------->AtMYB61                               <---------MYB111(1)                               <---------MYB59                               <---------MYB46(2)                              xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             ------>MYB83                             ------>MYB46(1)                           <---------MYB59                        --------->ARR14(2)                                              ------>MYB83                        <---------ARR14(2) --------->LBD16                              ------>MYB46(1)                     --------->ANAC46  <---------ARR14(2)                             <---------MYB59                     --------->ANAC55(2)  --------->TOE1(2)                        ------>MYB83                     <---------HSFB2a(2)  --------->DEAR3(1)                       ------>MYB46(1)                     --------->HSFB2a(2) --------->MYB46(3)                      <---------MYB111(1)                     <---------ANAC55(2) --------->DEAR3(2)                      <---------MYB46(2)                    <---------LBD16<-----------------AGL1                        --------->AtMYB61            <---------ANAC46--------->ORA47(1)                                   --------->MYB46(3)        <---------YAB1--------->LBD16  --------->ARR14(2)                       --------->ANAC58       --------->AHL20(1)  --------->DEAR3(1)                                 --------->ANAC46       <---------ARR11(3) --------->MYB46(3)                  <---------AHL20(1)--------->ANAC58       <---------AHL20(1) --------->DEAR3(2)  <---------SPL7  --------->AHL20(1)--------->ANAC46   acttttcaatatttttgtgtaatccggaaccgacctaacccgaaccggcgaaccgaaattgatatatattagagtaatccacaccaaaccaaactaaact  16017400               --------->TOE2(3)               --------->TOE1(3)              ----------->RAV1(2)             -------->P             ------>MYB83             ------>MYB46(1)        ------->TEIL                                             ---------->DOF2        --------->GLK1(2)                                    --------->LBD16        --------->ARR14(2)                             <-----------GT1                             <-        <---------ARR14(2)                <---------ANAC58 --------->ANAC46                        <-   --------->MYB52(1)                     <---------ANAC58--------->DEAR3(1)           --------->YAB1   aaaaaaaacgaatccaacctgaaatttagaaaaacccaaatgaggcttatgagcttatcaccccccataaaccagaataaaaccgagactcatagttcag  16017500                                    --------->ARR11(3)                              <-------TEIL                            ------->PIF5                            <-------MYC2                            <-------PIF5                            ------->MYC4                            ------->MYC2                             <---------ANAC58                            <-------MYC3                             <---------ANAC58          ------                    <---------AHL20(2)                            <<<<<<<<<<GT-3b            --------                    --------->AHL20(2)                        <---------AHL20(2)           ----------                   --------->AHL20(2)<------ZmHOX2a(2)       <---------AHL20(1)          ------->GAMYB   ------->TEIL  --------->YAB1     <---------ARR11(3)       --------->ARR11(3)       --------->MYB52(1) --------------AtSPL8       ------->MYC3                ----------->GT1 ----------->GT1--------->MYB52(1) --------------AtSPL3     ------->TEIL    <----------DOF2    <---------ARR11(3)      --------->MYB46(3)   aaatgtaccgattcagcactaataaatgaacgtgcatagatcatctttcatctaaaaattgtatatatttttcttggtaaaaaaaaaacaaccgaaagtg  16017600                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                       <---------GLK1(1)                                                                                       --------->GLK1(1)                                                                                      --------->AGP1                                                                                      <---------ARR11(3)                                         <---------ZAT6                               <-----------ARR10                               --------->TOE1(3)                           <------ZmHOX2a(2)       ----------->GT1         --------->TOE2(3)               --------->YAB1         <---------ARR14(2)   ---------->DOF2            <----------ID1                  *TSS    <---------LBD16 <---------AGP1< ----->GT1                   <---------TOE2(3)                <---------AHL20(2)      --------->ARR14(2) --->GT1                    --------->MYB52(1)                <---------YAB1          --------->ARR11(3) >DOF2 <----------ID1     <---------MYB52(2)                 --------->AHL20(2)      <---------CCA1(2)   aaaaaaaaagagaaaaacccagaagtcaaataacgataaactagtggtgactactaaaactcatataatagcttcggatcaaatcccagatctcttctct  16017700                                           <------NtERF2                                         <---------ANAC58                                         <---------ANAC46                                        <---------LBD16                                 ----------->RAV1(1)                            <------ZmHOX2a(2)                            --------->CCA1(2)                           <---------ARR14(2)                                                  ------                           <---------ARR11(3)                                                 <------                           --------->AGP1<---------ANAC58                              --------->ARR14(2)                           --------->ARR14(2)               --------->At4g35610        <---------ARR14(2) <<<<<<<<TBF1  --------->ANAC46 --------->ANAC46            <---------At4g35610<---------ARR11(3)   tcttcttccacatttacacaaaaaccctagatccacaacaatggcggaagagaagaaatcgaagcagagacatcgagtcatggtcttcgaatccatgtat  16017800                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                                               <-----                            <---------ANAC58               <---------REM1(1)              <---------ARR11(3)                            <---------ANAC46       <---------At4g35610                    --------->ARR11(3)          ----------------------->TaNAC69(2)       <---------ZAT2                        <---------GLK1(1)    ------>ZmHOX2a(1)   <-----------HVH21          --------->At4g35610                   --------->GLK1(1) ->TEIL <----------DOF2--------->ANAC46 <----------DOF2 <-----------RAV1(1)      <---------------AtSPL3 ---CCA1(2)  <---------YAB1 <---------ANAC58      ------->TEIL  <---------ARR11(3)   --------->SPL7   cccatcctcgctcttatgcttatactcgtcgcttgcgtcgagctttgcgatgcagctactgttgtagatgtttatcgtctaatccagtacgatatctctg  16017900                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                  <------NtERF2                                                                 ------>NtERF2                                                                <---------PCF2                                                             --------->ALFIN1                                         <---------At4g35610<-------MYC3                                   <---------ICU4           ------->MYC3                                --------->YAB1             --------->O2              ------->TEIL                                <---------ICU4             <---------O2          --------------->AtSPL8    <----------DOF2            <---------ATHB12    --------->At4g35610<------ZmHOX2a(2)          ---- ------RAV1(1)  <---------CCA1(2) <---------YAB1   <---------At4g35610===============================   gtgttccttttggttctcgtttctcttctcttaatcatcatgctgcttctcttagcttccaacgtggtgccgatctatctcgttctgtacttatacttcc  16018000                                                                                                <----                                                                                      --------->ARR11(3)                                                                                      <---------GLK1(2)                                                                                    ----------->ARR10                                                                                 <---------ANAC46                                                                                 <---------ANAC58                           <---------TOE2(3)                                <XXXXXXXXXXXXXXXXXXXXXMIR855                  <----------DOF2                               --------->ATHB12 <---------ANAC58      --------->At4g35610  <---------TOE1(3)     --------->TOE1(3)      <---------GLK1(1)       <---- -->ZmHOX2a(1)   <---------ANAC58               --------->At4g35610     --------->GLK1(1)     <------ ===HOX2a_HOX2a  <---------ANAC58      <---------ANAC46      <----------DOF2<----------DOF2  <-------   tcttcgtgagcttgacattgcttttgttcaaggtttggattttgtggattagcttaaatcggactttgatttggatttcttttgcttagattttgttact  16018100                               <---------ANAC46                               <------MYB83                                       <---------MYB46(3)                               <------MYB46(1)                                   --------->ALFIN1                             <----------DOF2                                     <---------AtMYB61    <---------At4g35610     <---------ANAC46                                   <---------MYB46(3)    --------->At4g35610     <---------ANAC58          ------>ZmHOX2a(1)        <------MYB46(1) -----ZAT6                  <---------ANAC58         --------->TOE2(3)         <------MYB83 -------RAV1(1)   ---------->DOF2     <---------MYB46(3)                      <---------AtMYB61 ---At5g28300 --------->ANAC58<---------MYB46(3) <---------ANAC58          <-----------RAV1(1) ----GT1      --------->ANAC58--------->MYB55(2) <---------ANAC58          <---------HSFB2a(1)   gttggcagattacatctcgcaaaagcagtcgcttggtggattgttgattttgcttcctcagacgtttaggcctgggaatgttggtggtggaagtttaagc  16018200  Previous    Next  AGI:  At3g44330.1    Description:  similar to hypothetical protein OsJ_024705 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41222.1); similar to Os08g0102100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060766.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48702.1); contains InterPro domain Nicastrin; (InterPro:IPR008710); contains InterPro domain Nicalin (InterPro:IPR016574) Range:  from: 16017662    to: 16021952    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version