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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ANAC55(2)
--------->
LBD16
--------->
ANAC55(2)
--------->
ARR14(2)
--------->
ANAC55(2)
--------->
GLK1(2)
------>
ZmHOX2a(1)
<---------
ANAC55(2)
---------
ALFIN1
<-----------
GT1
<---------
ANAC55(2)
<-----------
GT1
<---------
AHL20(2)
-
REM1(1)
<---------
ARR14(2)
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
ttccacttgagaatatgttttttttttcctgatatatgcttcgcaaattacatatatatcattttttaaaaatgttacatatcacttattaattttttta
16004000
<-------
--------
<--------
-------->
HAHB4
--------->
ATHB12
<---------
YAB1
--------->
ICU4
--------->
YAB1
--------->
YAB1
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<--
<---------
AHL20(2)
<---------
AHL20(2)
---
--------->
AHL20(2)
--------->
AHL20(1)
<---
<---------
AHL20(2)
<---------
AHL20(1)
----
--------->
AHL20(2)
--------->
AHL20(2)
<---
<---------
TOE2(3)
--------->
AHL20(2)
----
<---------
DOF5.7(2)
<---------
AHL20(2)
<------
--------->
MYB52(1)
<---------
YAB1
<---------
ICU4
<-----------
GT1
<----------
DOF2
<---------
AHL20(2)
-----------
<---------
MYB52(2)
<-----------
GT1
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
aaaacaattaacgatttattaatttatcgatttatgtcattttttacattgtttcaatttgaaatcgatttttttttattaaattataaaaatgattaat
16004100
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--
AHL20(2)
->
AHL20(2)
-
WOX13(1)
--------->
ALFIN1
-------
AHL20(2)
----------->
GT1
<---------
ANAC46
------>
ATHB12
--------->
ALFIN1
<------
MYB83
------
AHL20(1)
<------
MYB46(1)
<------
MYB46(1)
<---
----->
AHL20(2)
<---------
AHL20(2)
<------
MYB83
--------->
YAB1
--------->
MYB59
----
------
AHL20(2)
<---------
ARR11(3)
<---------
ANAC46
<---------
AHL20(2)
--------->
MYB46(2)
----->
AHL20(1)
--------->
ARR11(3)
--------->
MYB46(2)
--------->
TOE2(3)
----
---
AHL20(2)
<---------
AHL20(2)
--------->
MYB111(1)
--------->
TOE1(3)
<------
ZmHOX2a(1)
>
GT1
<---------
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
--------->
MYB111(1)
ttattgagtattaatttatagagattttattctatataacattaggtggagaattacatttatattcttcttaccttcatattaggtggaggattacatt
16004200
--------->
ANAC55(2)
<---------
ANAC55(2)
<-------
MYC2
------->
MYC3
------->
MYC2
<-------
MYC3
<-------
MYC3
------->
MYC3
<---------
TGA1a
--------->
DEAR3(1)
------->
MYC2
--------->
TGA1a
--------->
AtMYB61
<-------
MYC2
--------->
O2
<---------
MYB55(2)
--------->
ANAC55(2)
>>>>>>>>
CAMTA3
<---------
TGA1a
<---------
O2
------>
ZmHOX2a(2)
--------->
ANAC46
<---------
ANAC55(2)
--------->
MYB52(2)
<---------
ANAC55(2)
<---------
DOF5.7(2)
<-------
TEIL
--------->
O2
--------->
ANAC46
--------->
MYB46(3)
<---------
O2
--------->
ANAC55(2)
<---------
MYB52(1)
--------->
TGA1a
<-----------------------
TaNAC69(2)
---------->
DOF2
--------->
ZAT14
--------->
MYB46(3)
------------>
CBF
------
AHL20(2)
==================================
bZIP_DOF
<---------
ALFIN1
----->
AHL20(2)
==================
bZIP_DOF
----------->
HVH21
--------->
MYB52(1)
----->
YAB1
--------->
CCA1(2)
--------->
ZAT18
--------->
DOF5.7(2)
<---------
MYB52(1)
------
tatattcttcttacataagataagaaaaagaacacgtgaactactgaacacgtgaacgcgtgatccaccaccggttcgttctgcaataccgtctcaagta
16004300
---------->
DOF2
<---------
ZAT14
----------->
GT1
------>
ZmHOX2a(2)
<---------
AHL20(2)
--------->
ZAT14
--------->
DAG2
<------------
CBF
---------->
DOF2
------>
NtERF2
*
TSS
---------->
DOF2
------
--->
YAB1
<---------
WOX13(1)
----------->
TBP
--------->
O2
<---------
YAB1
---------->
DOF2
taaaactaaaaattgatcgacaaaaaaaaaaagactatatataatgcctcccaagtctcttcagt
gtcatcaaagtataaagtaaaaacaaagactcgag
16004400
<---------
ALFIN1
------------------>
SPL14
<---------
WRKY18(1)
--------->
WRKY45
----------->
HVH21
--------->
WRKY38(1)
--------->
WRKY12
--------->
DOF5.7(2)
<---------
YAB1
<-------
GAMYB
--------->
MYB46(3)
<---------
ANAC58
--------->
SPL7
<-----------
RAV1(2)
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
ANAC46
<---------
SPL7
--------->
WOX13(1)
<---------
ANAC58
--------->
ANAC46
--------->
At4g35610
<---------
TOE2(3)
--------->
ANAC46
<---------
At5g28300
----->
GT1
<---------
At4g35610
<---------
TOE2(2)
--------->
MYB46(3)
<-----------
GT1
<
ttaat
atgtctagtactgaagaaatgtcatcagtcaaaaacacaactcaggttattggcgttgacccatcctccaccgtacgagttaccatcgttcaatc
16004500
--------->
ANAC55(2)
<---------
TOE2(3)
--------------->
AGL15
<---------
ALFIN1
<-----------------
AGL1
<-----------------
AGL2
----------------->
AGL1
<-----------------
AG
<---------
AHL20(2)
------>
NtERF2
<---------
AHL20(2)
<---------
ATERF1(1)
-------->
HAHB4
<---------
AHL20(1)
------>
NtERF2
<---------
ICU4
--------->
AHL20(1)
--------->
ANAC46
--------->
ICU4
<---------
AHL20(2)
--------->
LBD16
<---------
ATHB51
--------->
AHL20(2)
-------->
HAHB4
--------->
MYB59
<---------
YAB1
<---------
AHL20(2)
--------->
YAB1
<----------
DOF2
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
<---------
DAG2
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ANAC55(2)
--------->
YAB1
<---------------
AGL15
<---------
MYB52(1)
--------->
AHL20(2)
-----------
--------->
DEAR3(1)
--------->
LBD16
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ANAC55(2)
---------
ALFIN1
<---------
LBD16
<---------
AHL20(2)
--------->
LBD16
<---------
AHL20(2)
-----
ttccaccgtctataatgataccccggccactttag
gtaactaattaatccattaattattccgctatatatatatatatttttttttttgatatgtaaca
16004600
---------->
DOF2
--------->
ANAC58
--------->
ANAC58
<---------
ANAC46
--------->
DEAR3(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
ERF1
------>
NtERF2
<---------
RAP2.3(1)
<---------
ORA47(2)
<---------
DEAR4(2)
<---------
ATERF1(1)
<---------
RAP2.3(3)
<---------
RAP2.3(2)
<---------
RAP2.6(2)
<
<---------
DEAR3(1)
<-
--------->
ATERF1(2)
<----
----------->
GT1
<---------
ANAC46
<-------
<------
NtERF2
--------->
ATERF1(1)
<-------
<---------
ETT(2)
<---------
ABI4(1)
--------->
LBD16
<---------
HSFB2a(1)
--------->
LBD16
<------
NtERF2
--------->
HSFB2a(2)
--------->
YAB1
<----------
ARF1
<---------
RAP2.3(1)
<---------
HSFB2a(2)
>
GT1
--------->
HSFB2a(1)
<---------
ANAC46
<---------
ATERF1(1)
<------
MYB46(1)
<-------
---->
TOE2(3)
--------->
ETT(2)
<---------
DEAR3(1)
<------
MYB83
--------->
LBD16
tttatcaaaacgttccatctcaaattgtag
acaaggcggagaagtttattgtggaggcggcgagcaaaggagcgaagttggtgttgtttcccgaggcgtt
16004700
--------->
GLK1(1)
<---------
ARR14(2)
<---------
MYB52(1)
--------->
ARR14(2)
<---------
MYB52(2)
<-------
GAMYB
--------->
MYB46(3)
<---------
DEAR3(2)
<---------
ANAC46
<---------
MYB46(3)
<---------
ANAC55(2)
<---------
DEAR3(1)
--------->
ALFIN1
<---------
ANAC58
------------>
AtMYB77
<------
MYB83
--------->
ANAC55(2)
---------
DEAR3(1)
<------
MYB46(1)
--------->
MYB52(1)
<---------
ANAC58
--------
At4g35610
--------->
MYB59
--------->
GLK1(1)
----------->
GT1
<---------
At4g35610
---
TEIL
<---------
AtMYB61
<-------
TEIL
----------->
HVH21
-------->
P
<-----
--
ANAC58
<---------
TOE1(3)
--------->
MYB55(2)
<---------
ANAC46
<---------
MYB111(1)
--
ANAC58
<---------
TOE2(3)
<---------
MYB46(3)
<---------
ANAC58
<---------
MYB46(2)
--
ANAC46
------>
ZmHOX2a(1)
<---------
MYB46(3)
<---------
ANAC58
<---------
MYB111(2)
----
catcggcggttatcctcgaggttttaggtttggtttagcggtgggagttcataacgaagaagggcgtgatgagtttcgtaactaccatgcttctgctatt
16004800
--------->
AHL20(2)
--------------->
AGL15
<---------
AHL20(2)
--------->
ARR11(3)
--------->
WRKY38(1)
<---------
ARR11(3)
--------->
WRKY45
--------->
AHL20(2)
----------->
GT1
--------->
WRKY12
--------->
AHL20(1)
--
--------->
LBD16
--------->
DOF5.7(2)
<---------
AHL20(1)
---
----
YAB1
<---------
MYB52(1)
------->
TEIL
<---------
AHL20(2)
<-----
------>
DOF2
--------->
At4g35610
<---------
CCA1(2)
<-------
TEIL
<---------------
AGL15
<--------
aaagtccctg
gtaaaatcatccgttgactctattttttttttgtatctcagtttgtagtttcattttattatcttgtttaagtaaattgatattttgata
16004900
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AGI:
At3g44320.1
Description:
NIT3 (NITRILASE 3). Identical to Nitrilase 3 (NIT3) [Arabidopsis Thaliana] (GB:P46010;GB:O04909); similar to ATNIT1/NIT1/NITI (NITRILASE 1) [Arabidopsis thaliana] (TAIR:AT3G44310.3); similar to ATNIT1/NIT1/NITI (NITRILASE 1), nitrilase [Arabidopsis thaliana] (TAIR:AT3G44310.1); similar to nitrilase 2 [Brassica rapa] (GB:ABM55734.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010); contains InterPro domain Nitrilase/cyanide hydratase, conserved site; (InterPro:IPR000132)
Range:
from: 16004366
to: 16006798
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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