Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <-----------GT1                                                         <---------ICU4                                                        --------->AHL20(2)                                                        --------->AHL20(1)                                                        <---------AHL20(2)                                ------>ZmHOX2a(1)      --------->AHL20(2)                          --   <----------DOF2  <---------KAN4(2)             <------ZmHOX2a(1)                        >>>>>>>>>TBF1 ---------->ID1    --------->YAB1  --------->YAB1----------->GT1                <----------DOF2   --- -------DOF2<---------ETT(1)   <---------MYB59  <---------TOE2(3)            <-----------GT1---------   tttgtctttttcttccgacaagaataacctagtcctaacataacaaacttgaggaaaaaaaattacagaacaagaagattaactttgtaagaagaagaaa  15985800                                                                                             ------>MYB83                                                                                 ====================                                                                                 ------>ZmHOX2a(2)                                                                                =====================                                                                                <------ZmHOX2a(2)                                                                                --------->GLK1(1)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                               <-----------ARR10                                                                               <---------ARR14(2)    <--------P             >>>>>>>>>GT-1                          <---------KAN4(2)       --------->MYB46(3)  ----------->GT1       ----------->GT1                        ----------->GT1 --------->ARR14(2) ------->DAG2         <-----------RAV1(2)                  --------->TOE2(3)   <---------AGP1------>MYB46(1) ------->DOF2       ------->TEIL                     --------->TOE2(3) --------->TOE2(3)--------->ANAC46 -->GT1          <---------MYB52(2)           ----------->GT1<-----------RAV1(2)<---------GLK1(1)   aaaagggtaagtatagaaaacgaaccaggtaaatcccaaggctcgaagttgtaaatctcaacctcaggtataatctcaacagatctctccaaaccatcca  15985900                                                                                         <---------MYB46(3)                                                                                        <---------AtMYB61                                                                              <---------ZAT2                                                                              <------NtERF2                                                                             ------>NtERF2                                                                             <---------DEAR3(2)                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                            --------->RAP2.3(3)                                                                            --------->RAP2.6(2)                                                                            --------->RAP2.3(2)                                                                            --------->ATERF1(2)                                                                            --------->DEAR3(1)                                                                            <---------ATERF1(2)                                                                           --------->ATERF1(1)                                                                           --------->DEAR4(2)                                             --------->GLK1(2)             --------->RAP2.3(1)     --                                       <------NtERF2                       <---------LBD16        ---                                      <---------HSFB2a(2)                 ------>NtERF2 --------->ALFIN1                   --------->CCA1(2)  <---------LBD16                     <---------ATERF1(1)    ----                  --------->ARR11(3) <---------DEAR3(1)                   --------->ABI4(1)    ------                  <---------ARR11(3) <---------MYB46(3)                 --------->DEAR3(2)     <-----         --------->ANAC55(2)       <-----------HVH21                   <---------At5g28300     ------         --------->ANAC58          <-------GAMYB                    <-----------TGA1    <---------DEAR3(1)         --------->ANAC58         <---------DEAR3(2)                <-----------HVH21<---------DEAR3(1)         --------->ANAC46         <---------SPL7                  <------NtERF2      <---------MYB46(3)   ------>ZmHOX2a(1)              <---------MYB46(3)            <---------DEAR3(1)   ------>ZmHOX2a(2)  <---------------AGL15          <---------At1g77200    --------->ANAC58--------->ATERF1(1)    <-----  --------------->AGL15          <---------DREB2C(2)    --------->ANAC58--------->MYB46(3)   <------- =========HOX2a_HOX2a           --------->DDF1         --------->LBD16 <---------ATERF1(1) <---------REM1(1) =========HOX2a_HOX2a          <-----------HVH21      <-----------RAV1(2)--------->DEAR3(1)--------->ALFIN1   tcttcctcttcaagtaataagatataagttcgatgtcggtcggggagaatttgaagccagggaacgtcgtcgtcaccgccggctcgatcggtggtgcagc  15986000                                                 <---------YAB1                                               <---------At4g35610 --------------->AGL1                        <---------ANAC58 --->NtERF2                             <----------DOF2                      <---------AHL20(2) ----->RAP2.6(2)                        ------>ZmHOX2a(1)                   --------->YAB1      <---- --->ZAT2                            ================================HOX2a_HOX2a            --------- ----At4g35610                       <------ZmHOX2a(2)                     --------->AHL20(2)   ----- --->At4g35610                      <---------ARR14(2)                 --------->AHL20(2)  <---------ANAC46 ----ZAT2                     <----------DOF2<---------ANAC58  ----------->GT1             <---------LBD16 ----RAV1(2)        ---------->DOF2 --------->ARR14(2)        <------ZmHOX2a(1)           <---------LBD16   tgccataagggtagagatgatgcaaagagagtctttccgatcctttggcttctgataaacttgaggagtcaaaaaaaataaaaatgttctgtctcgggaa  15986100                                                                               <---------------------                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                          --------->ZAT2                                                                          ----------->RAV1(2)                                                 --------->ICU4         <---------ALFIN1        <---- -----ARR14(2)                        ---------->DOF2       <----------DOF2--------->TOE2(2)<-------- >HSFB2a(2)                     ----------->GT1  <---------YAB1  <---------ZAT18          ---------->ID1 ---->GLK1(2)                  <---------------AtSPL8------>ZmHOX2a(2)*TSS<---------ZAT2 <-----------GT1   tcggaacaagactcgtgaagaagacaatacaatatagtacaaaagaaggcgatgatcgagtgctttgctcactcacacctgcgtttcagtttttcttttt  15986200                                             --------->ANAC46                                <---------ANAC55(1)                                <---------ANAC55(2)                                --------->ANAC55(2)                      --------->AHL20(1)                                <---------ANAC46                         <---------AHL20(1)       --------->ALFIN1         <---------ANAC58                         --------->AHL20(2)       <---------REM1(1)        <---------ANAC58                         <---------AHL20(2)   ================RAV         <---------TOE2(3)       ----------->RAV1(2)          <---------ZAT18   <-----------RAV1(2)        <-----------GT1--------->ANAC58        <---------AHL20(2) <---------ALFIN1          <---------ICU4    --------->ANAC58       <---------AHL20(2) ---ANAC81                --------->AHL20(2) --------->bZIP60(2)    --------->AHL20(2)      <------ZmHOX2a(1) -------GT1        <------------CBF          --------->O2------>ZmHOX2a(1)  <---------YAB1<---------TOE2(3) --DOF2<-----------RAV1(1)--------->ICU4   <---------ALFIN1 --------->TOE2(3)       --------->ZAT18 <   tctccacaggtgttgctctgctattgaaatatttacgtatgacttccacgttactactcctgcctcaaattttaatttattaataggtcactaaggacga  15986300                                                                                  <---------At5g28300                                                                                 <-----------GT1                                                                            <---------AHL20(2)                                                                           <---------AHL20(1)                                                                           --------->AHL20(1)                                                                      --------->AHL20(2)           <-                                                                      <---------AHL20(2)      <------                                    <---------ANAC58                <---------AHL20(2)        <------                              <---------REM1(1)                     --------->AHL20(2)   --------->YAB1                           <---------MYB46(3)                     --------->AHL20(2)    <---------YAB1                          <---------WOX13(1)                      <---------AHL20(2)    <---------AHL20(2)    --------->KAN4(1)  <---------YAB1                      ----------->GT1<---------AHL20(2)---------  <---------GLK1(2)<---------ANAC58 <---------ANAC58 <---------HSFB2a(2)--------->AHL20(2)  <-------- ---------TOE2(3)  <---------ANAC58 <---------ANAC46 --------->HSFB2a(2)<---------AHL20(2) --------->ICU4   tttagattattcaaagaattagcgtctgattgttgtaggcttgtagctctagtctctagaattgttatatatatatatatattttactgtataattatgt  15986400                                                --------->AHL20(2)                                           <---------YAB1                                         <---------AHL20(2)                                         --------->ATHB51                                         --------->AHL20(2)     <---------YAB1                      <---------ICU4 --------ANAC46                         --------->ICU4                                              < -----RAV1(1)                           <---------YAB1                                              - ---YAB1                         <---------ANAC46             <---------AHL20(2)              <------ >YAB1                           <---------ANAC58            --------->AHL20(2)          <---------ANAC46 -ICU4--------->YAB1             <---------ANAC58   --------->AHL20(2)         <-----------GT1-------   tggctgtattataagtttttgttttgtaagttttttcgtgtaattatttttaaaataaaaacataaaattgaaatttgtattatcagccttgtgggaaat  15986500                                                                                    --------->HSFB2a(1)                                                                                   --------->SPL7                                                                                   <---------TOE2(2)                                                                                   <---------TOE1(2)      --------->At5g28300                                                          <-------TEIL     ----------->GT1                                                               ------->TEIL   --------->At4g35610                                                           <---------SPL7     <   <---------At4g35610                   <-------TEIL                            --------->TOE1(2)  - <---------DEAR3(1)           <---------YAB1                                   <---------------AtSPL3 ---------LBD16            <---------YAB1------->TEIL         <---------ANAC58 --------------->AtSPL3 ----->ZmHOX2a(1)        <---------CCA1(2)       <---------MYB52(1)        <---------------AtSPL3   < ---HSFB2a(1)           ------->TEIL <---------------AtSPL3   <---------ANAC46 <-------TEIL         - -->HSFB2a(1)       ------->TEIL     <---------------AtSPL8   <---------ANAC58 ------->TEIL   <------   tcctcggctgtaaaaatagacgaatgtatatcattgtagtatgtacgttctgttttttttttttgtgtgtgtcaaaatatgtacgtacgttctgttttac  15986600                                                                                               <-----                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                          --------->YAB1                                                                 <---------ARR11(3)      --------->AHL20(2)        <---------AHL20(2)                                       --------->GLK1(2)       <---------AHL20(2)       --------->AHL20(2)                                        --------->ARR11(3)     --------->AHL20(2) <---------AHL20(2)                 --------->YAB1    ----------->GT1                   <---------AHL20(2) ---------AHL20(2)               <---------ICU4     ------>ZmHOX2a(2)                  <xxxxxxxxxxxxx -------->AHL20(2)          --------->TOE2(3)<-----------GT1    --------->RVE1(1)      <xxxxxxxxxxxxx ---------AHL20(1)       <-----------GT1  <---------ICU4      --------->AHL20(2)     <xxxxxxxxxxxxxxx -------->YAB1       <---------ICU4<---------YAB1 <---------ARR14(2)   --------->YAB1--------->AHL20(2) -----GT1         --------->YAB1--------->ICU4    --------->ARR11(3)   ----------->GT1xxxxxxxxxxxxxxx   aataaaattttaaattgtattcataatttacctcattatcagaaaaattactgatctggctaaaaaaaatctatagtaaaaactctataaattaataatg  15986700  Previous    Next  AGI:  At3g44290.1    Description:  ANAC060 (Arabidopsis NAC domain containing protein 60); transcription factor. similar to ANAC089 (Arabidopsis NAC domain containing protein 89), transcription factor [Arabidopsis thaliana] (TAIR:AT5G22290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48692.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 15983896    to: 15986170    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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