Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------AHL20(2)                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                      --------->AHL20(2)              <-------TEIL         <---------ZAT6      <---------ZAT6                     <---------ARR11(3)      <---------AtMYB61   <-----------GT1            <-------TEIL--------->AHL20(2)                 < ----AHL20(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->AHL20(1)                  < --->AHL20(2)          <---------MYB46(3)    ------->TEIL       <---------AHL20(1)       <------NtERF2   aatgtgttttggtgttatcgaatagttgttactgtaagaaaaaaatgaatttagattcacttgcaatatatatacatttatatataatggcgcaacgatg  15938700                       --------->AtMYB61                     ------>MYB46(1)                     ------>MYB83                    <---------ALFIN1                    --------->MYB55(1)                   <---------MYB55(2)           --------->GLK1(2)          --------->ARR14(2)          --------->ARR11(3)          <---------ARR14(2)          <---------GLK1(2)          <---------ARR11(3)         <---------HSFB2a(1)         --------->HSFB2a(1)         --------->HSFC1(2)         <---------HSFC1(2)       <----------DOF2        ----------->ARR10  ---------->DOF2   ---------->DOF2 --------->MYB46(3)                              <---------YAB1  <------ZmHOX2a(1)<---------MYB111(2)                    <-----------GT1            <----------DOF2 ---------TOE1(3)  --------->DEAR3(1)                 <----------DOF2           <-----------GT1 ---------TOE2(3) --------->ANAC46------>ZmHOX2a(1)--------->GLK1(2)     --------->ANAC55(2) --------   ctaaggaaagaagattcttcacccacctccaaagtcctttacagtgagtagagaagctttttacaaactatgtttatgtaataaactctttagaatggtt  15938800                                      <---------MYB52(1)                                     --------->TOE2(3)                               --------->AHL20(2)                               --------->ARR11(3)                               <---------AHL20(1)                          <---------AHL20(2)                          --------->ZAT18                          --------->AHL20(2)   --------->ZAT6    ---------->DOF2                     <------ZmHOX2a(1)------>ZmHOX2a(1)    ----------->GT1           <---------AHL20(2)  --------->AHL20(1)         --------->DAG2       ---------->DOF2           --------->AHL20(2)  <---------ARR11(3)        ---------->DOF2   --------->ANAC58 <---------ICU4<---------YAB1  <---------AHL20(2)      --------->ARR11(3)  --------->ANAC58      <<<< --->GT1   --------->AHL20(1) --------->AHL20(2)   ---------->DOF2--------->DAG2    --------->ZAT18   aaaacattgcaaattttttgataggaatataaatatattccttagtttttcactaaagataaagttaaaaagtgaacaagctaaagttcacgaatattgg  15938900                      <---------------AGL15                      ===============================================================================                   --------->WRKY38(1)            --------->YAB1                      --------->ARR14(2)       <---------ICU4         --------->YAB1                      <---------ANAC58           <---------YAB1             <-        <---------AHL20(2)                   --------->ANAC55(2)        --------->ICU4       --------        --------->AHL20(2)     --------->AHL20(2)                     --------->YAB1       <-------TEIL       --------->AHL20(2)    ----------->GT1 <---------ANAC58        --------->ICU4 --------->AHL20(2) <---------AtLEC2  --------->WRKY12         <---------TOE2(3)        <---------YAB1 <---------AHL20(2) <<<<<MYB2  -------->HAHB4 ---------->DOF2--------->TOE2(2)          <---------ATHB12<-----------GT1   ttttcatgaattaataatacgttgacaaaaaaagaaaatataaacttacgttttcgcatttgcaaattgcaatgataattgttttttttaatatacatta  15939000                      <-------GAMYB                     <---------MYB46(3)                                                      <-------                     --------->MYB52(2)                                                      <-------         ---------->DOF2                                                             ---------->DOF2   --------->YAB1  <---------MYB52(1)                                              --------->AHL20(2)  <---------YAB1 <---------ANAC46                     --------->YAB1               --------->YAB1 ==============MADS_MADS       <---------YAB1 <-----------GT1                     ----------->TBP --------------AGL15 --------->MYB55(2)       ------->TEIL                    ------------>CBF ->TOE2(3)      <------NtERF2--------->YAB1--------->ANAC55(2)              ----------->HVH21--------   acttatcatagcaaaggctccgtttgttgtatgatgactctatatatgtaactccatagtaactcactgtctcttgatgtgacaataaaaagaagagagt  15939100                                                                                      --------->ANAC58                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                             ------>MYB83                                                                             --------->MYB52(1)                                                                             ------>MYB46(1)                                                                            --------->MYB55(1)                                                                           <---------MYB111(2)                                                                           <---------MYB46(2)                                                                           <---------MYB52(2)                                                                           --------->MYB46(3)                                                                           <---------MYB111(1)                                                      <---------ZAT18      --------->AtMYB61                                                      ------->GAMYB        <---------MYB55(2)    ----                                                 ------->GAMYB            --------->ANAC46  ------->GAMYB                                                --------->ANAC58        <---------ALFIN1   --------->MYB46(3)        <----------DOF2                         --------->ANAC58        --------->AtMYB61--------->MYB52(1) --------AtSPL8                                 --------->ANAC46 <----------DOF2      --------->ANAC46 --------AtSPL3                    <----------DOF2   --------->ANAC58  --------->MYB46(3)----------->RAV1(1) ------->AtSPL8           --------->TOE2(3)    *TSS  --------->ANAC58--------->ANAC46 --------->ANAC58   acctctctgtctttgttatataagaaaacatcaacttctttgctctctcaacgcaacgcactaatctctttccaccaccaaacgctaaacgcaacagcca  15939200                                                                                      <---------ZAT2                                                                                      --------->At4g35610                                                                                      --------->ZAT2                                                                                  --------->ANAC46                                                                                 <---------HSFB2a(2)                                                                                 --------->HSFB2a(2)                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                       <---------ANAC58                                                                       <---------ANAC46          <---                                                            <------ZmHOX2a(1)<---------GLK1(1)   <---                                                  <---------ARR14(2)   <---------ANAC58          <---                                                  --------->ARR14(2)  <---------MYB46(3)     <------- ----->ICU4                 --------->ANAC46     <------ZmHOX2a(1)<---------AtMYB61   <---------At4g35610   agatgactgagaaggaatgtgaacatcaccacgacgaagatgagaagatgaggaaacgtataggagcattggtgcttgggtttctcgcagctgttctttt  15939300           <-----------RAV1(1)           <-------MYC3           <---------ANAC58              ------->MYC3                --------->ANAC55(2)           <---------ANAC46           <---------ALFIN1            --------->ARR14(2)           --------->ALFIN1      --------->ANAC46             --------->MYB46(3)      <---------ANAC58           --------->ANAC58             <---------ATHB12      <---------ANAC58           --------->ANAC55(1)     --------->ANAC55(1) ------ANAC58                    --------->ANAC58        --------->ANAC58 ------ANAC46                  <---------ALFIN1          <---------ANAC55(2)             <---------MYB59 ------ANAC58--------->ALFIN1<---------ALFIN1            --------->ANAC46  <---------WRKY12 ---DOF2   <---------ANAC58 --------->MYB46(3)           --------->ANAC58  <---------WRKY38(1)<------   cgtggttttcttggtgtgggcgatacttcacccacacggaccacgttttgttcttcaagacgcaaccatttacgcgttcaacgtttctcagcctaattat  15939400                                                                                                  ---                                                                                                  ---                                                       <---------HSFB2a(1)                        ---                                                       --------->HSFC1(2)                        ----                                                       <---------HSFC1(2)                      ------                                                      <---------ARR14(2)                       <-----                                                      --------->ARR14(2)                      -------                                          --------->YAB1      ----------->HVH21               -------                              --------->ANAC58  --------->ARR14(2)                         --------->LBD16                              --------->ANAC58  <---------ARR11(3)                        --------->ANAC46                              --------->ANAC46  <---------ARR14(2)                  --------->At4g35610                      <----------DOF2  <---------ICU4 --------->GLK1(2)             <---------At4g35610                    <---------DAG2    ==================HOX2a_HOX2a                ------->TEIL<-----                <---------ZAT18       ------>ZmHOX2a(1)--------->HSFB2a(1)         <-----------ARR10               <-----------HVH21      ===================HOX2a_HOX2a            --------->ANAC58 ----              --------->ANAC46--------->ANAC55(2)<------ZmHOX2a(2)              --------->ANAC58-----              <---------At4g35610--------->GLK1(1)   <---------GLK1(2)          --------->ANAC46----- ---ICU4      --------->At4g35610<---------GLK1(1)------>ZmHOX2a(2)    ----------->HVH21<---------At5g28300   ctcacttctaatcttcaggtcactctttcttcacgaaatcctaatgacaagatcggaatcttctatgaccgccttgacatctacgcatcttaccgcaacc  15939500      ----------->GT1 --->MYB46(1) ----->P --->MYB83 ----->MYB52(1) --->MYB46(3) ----MYB52(2)                                      <----------DOF2 -->ANAC58                                         --------->TOE2(3)      ---------->DOF2 -->ANAC58                                     <---------GLK1(1)     --------->ANAC46           ----- ----MYB55(2)           --------->ANAC55(2)    --------->GLK1(1)     --------->ANAC58           ----- ------->RAV1(1)      <-----------GT1         <---------ARR14(2)     --------->ANAC58---------->DOF2 ---->AtMYB61    <---------ANAC58            <------ZmHOX2a(1)<---------ICU4  ----------->GT1  ------ -->GAMYB        <---------ANAC58          <---------TOE2(3) --------->ICU4--------->DAG2     -------   aacaggtattgtagaattagcgtttcacgtttttaaactcattttgaggatttctttaatgcaattcttacaagaaaaaagtgtttataaagaatggacc  15939600  Previous    Next  AGI:  At3g44220.1    Description:  harpin-induced family protein / HIN1 family protein / harpin-responsive family protein. similar to harpin-induced family protein / HIN1 family protein / harpin-responsive family protein [Arabidopsis thaliana] (TAIR:AT5G22200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79940.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 15939147    to: 15940745    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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