Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ZAT18                                            --------->ZAT18                                        <------ZmHOX2a(1)                                 <-----------ARR10                                 --------->ARR11(3)                                 <---------ARR14(2)                                 <---------ARR11(3)                                                <-               <---------ARR14(2)--------->GLK1(2)             <---------AtLEC2                <-----               --------->ARR14(2)--------->ARR14(2)<---------AHL20(2)                         -------            --------->YAB1      <---------GLK1(1)--------->ANAC55(2)                  --------->YAB1      <---------YAB1            --------->RVE1(1)--------->TOE2(3)        <---------ARR11(3)  <------   taaacattttgatatcatattcggttttaagagaatatctgaggagtgcatacttaatttcatttgcattgttgaatgtcttatgcaatgctaatagatc  15925900                                                                            --------->ATERF1(1)                                                                            <------NtERF2                                                                         ---------->ID1            <-                                            <---------WRKY38(1)      ------>ZmHOX2a(2)          -----                                            <---------WRKY12        <------ZmHOX2a(2)           -----                                     ===============================HOX2a_HOX2a                 <----                                     ------>ZmHOX2a(1)             <---------ARR11(3)       <-------- ----------RAV1(2)             <---------At4g35610                 --------->ARR14(2)      --------->ATERF1(1) -ZmHOX2a(2)                   <---------ZAT2                      <---------ARR14(2)    <---------ANAC58 -->ARR11(3)                   --------->ZAT2   <-----------HVH21  --------->ARR11(3)    <---------ANAC58 ---ARR11(3)                   --------->At4g35610           <------ZmHOX2a(2)<---------SPL7---------   atcaggttgaactccatcagtgaatggtctctcagcttcctcttggtcatcgtcggataatggatcagggatcttgtcgtcgtcccaaatgtcgtctccg  15926000                                          --------------->AGL15                                          <---------------AGL15                                          ===========================================================    --------->YAB1                       <-----------------AGL2 --------->bZIP60(1)                     ----------------->AGL1 <---------bZIP60(1)            --------->ANAC55(2) --------->YAB1                 --------->ANAC58 ----------HVH21                --------->ANAC58 ---->At4g35610                 --------->ANAC46 ---->LBD16      <-----------RAV1(1)     ----------------->AGL2       --------->GLK1(1) -----At4g35610----------->RAV1(2)       <-----------------AGL1      <---------ARR14(2)    --------->REM1(1) -ARR14(2)     <---------At4g35610   <---------ICU4          <-----------RAV1(1)        --------->TOE2(3) >ARR14(2)   <-----------GT1    --------->ANAC55(1)          <---------MYB46(3)         --------->TOE1(3)   ctgtcatcacaattttcacctgttgtttcttcacacgcatcatgcccaaaatggtcttctaagttgttgcagatttcaacatcgatgaaaccttcatctt  15926100                                                                                                    -                                                                                                    -                                                                                                    -                    --------->YAB1     <---------ARR11(3)                                          --               <-----------------AGL3  <---------ARR14(2)                                    <-------             --------->ANAC46          --------->ARR11(3)--------->ANAC58                 --------->YAB1        --------->GLK1(1)              --------->ARR14(2)--------->ANAC46           --------->ZAT6 <-        <---------GLK1(1)             <---------GLK1(1)  --------->ANAC58          <---------YAB1  --      --------->ATHB12      <---------ALFIN1   <---------MYB52(1)                <---------ICU4    <-  ------>ZmHOX2a(1)<---------ATHB12   <---------CCA1(2) --------->LBD16          --------->YAB1  ---- ================================MADS_MADS ------>ZmHOX2a(1)              --------->At4g35610--------   cttcctcttgatttccagccaaacatggttccacctctgtatatcctctgttatcttccacgataactggacagtcatcttcatcatcactagaatcatg  15926200      ------>NtERF2    <---------At4g35610 <-------TEIL -------->CCA1(2) -------->ARR14(1) -------->GLK1(2) ------->ARR14(2)                                                                              <----- --ICU4                                                                                    <--------- --------ARR14(2)                                                                        ------>ZmHOX2a(1) ------->ARR11(1)                                                  <-------TEIL    --------->HSFB2a(1) --------GLK1(2)         ---------->ID1                 --------->HSFB2a(2)        <---------HSFC1(2) ------->ARR10           <---------CCA1(2)              <---------HSFB2a(2)        --------->HSFC1(2) ->YAB1  ------>ZmHOX2a(1)        <----------DOF2      <---------LBD16             <---------At4g35610   agattcggctccttcgccttcaacttcgtctctctcctttgtgacttcgagttcgattcgggaatcacgttcaaattgattttgaagcttcctctttctt  15926300                                                                  <---------ANAC58                <------ZmHOX2a(1)                                 <---------ANAC46              >>>>>>>GRF7                                         <---------ANAC58        <---------LBD16           <-----------HVH21                                  <------------CBF       --------------->AGL15    <---------YAB1                      <---------AHL20(2)   <---------GLK1(2)       <---------------AGL15 -----DOF2<---------ZAT6       --------->ZAT14  <-------TEIL <---------ICU4         ----------------- -DOF2  *TSS <-----------RAV1(2)   ------------>CBF------------>CBF                ------------>CBF   tttgtcatggtagtgtcaggaatcactcttaactgaactcaatttatgggttcgtcaatttcagaattgcttaaaaaccctagatttcaatttgggggaa  15926400                  <---------YAB1                 <---------AHL20(2)               --------->ICU4       <------------CBF      --------->ATHB12      <---------ICU4                 <---------AHL20(2)      <--------ATHB1             <---------RVE1(1)                              <---------AHL20(2)     <---------YAB1             <---------ARR11(3) <---------TOE2(3)   <---------TOE2(3)     --------->ICU4  <---------TOE2(3)        <----------DOF2        <---------AHL20(2) >AGL1--------->ATHB51          --------->ARR11(3) >>>>>>>>>MYB98    --------->AHL20(2)   gaagagaataattgggaatttttatggataatgagatttttaatcgggcttttaacatagatgttaactaattaatgttgatttttttttggtccaaaaa  15926500                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                 <---                        <---------AHL20(2)           ---------->DOF2                   <-----------GT1                  <---------TOE2(3)    --------->AHL20(2)                          <---------AHL20(2)     <---------WRKY12  --------->AHL20(2)       <------ZmHOX2a(1)                 --------->AHL20(2)     <---------WRKY38(1)--------->AHL20(2)    <---------TOE2(3)                   <---------AHL20(2)   <-----------HVH21<------ZmHOX2a(1)  <---------AHL20(2)--------->ALFIN1--------->ALFIN1       <----   aacccagtcaactacacattgaggatttaatttgttcacatataaattgaggaataaaagtgtcgatttcaaatagtgggggaattaaatgaccattttc  15926600                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  ------>NtERF2                                                 --------->DEAR3(1)                                                 --------->RAP2.3(3)                     --------->TOE1(2)                                               <---------At4g35610          --------->At4g35610          <---------ANAC55(1)                  --------->LBD16              <---------At4g35610     ----------->GT1                          --------->ANAC46          --------->ANAC46 --------->TOE1(3) --------TOE1(2)                             <---------HSFB2a(2)        --------->ANAC58 --------->TOE2(3) ------->LBD16        <---------AHL20(2)     --------->HSFB2a(2)        --------->ANAC58 --------->TOE2(2) -------LBD16       <---------AHL20(2)       <---------LBD16       --------->At4g35610 ============== ------>LBD16       --------->AHL20(2)  <---------At4g35610       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ------LBD16 <-------MYC3               --------->At4g35610       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -----LBD16  ------->MYC3           <-----------TGA1             <---------ICU4        -------->P   ccgggttttgttacatgtgtatatatatatgtttatatcgtcatcttcccgcagccttctcatgtcatcatctccagcaactgattactaacctaagaat  15926700                                                                                             <-------                            <---------YAB1                                                   <-------                 --------->ANAC58                                                            <-------                 --------->ANAC58                                                  <-------TEIL------                 --------->bZIP60(2)                       <---------SPL7       <---------ANAC55(2)                 --------->TGA1a            ------>ZmHOX2a(2)       <---------ANAC58       <---------ZAT14                 --------->ANAC46  <---------ANAC46       <---------ANAC58      --------->ANAC58                 --------->O2   ----------->HVH21         <---------ANAC58      --------->ANAC55(2)             ------>ZmHOX2a(2)  --------->WRKY12  <---------MYB46(3)<---------ANAC46      --------->ALFIN1   <---------ATHB12    --------->AtMYB61   <------ZmHOX2a(2)        <---------ANAC58    --------->ALFIN1 ==========================MYC_MYB<---------TOE2(3)       <---------ANAC46      --------->ANAC58 ----   atcaaatcaacttgatcccaagtcaccatcaccattgacgttgagatcggagttgttggagcgtatggtttcgtttttgatcacgtacaagtgtggagtg  15926800  Previous    Next  AGI:  At3g44205.1    Description:  transposable element gene. Mutator-like transposase family, has a 1.5e-40 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays) Range:  from: 15924008    to: 15926308    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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