Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                          --------->YAB1                                        -----                                       --------->WOX13(1)                                      <-----                           <---------------AGL15                                        <---------WOX13(1)                           ------>ZmHOX2a(1)<---------YAB1                           <---------YAB1                          --------->TOE2(3) --------->ICU4                           --------->ICU4                       ------>ZmHOX2a(1) <---------ATHB12                            ------>ZmHOX2a(1)                --------->ARR14(2)<---------TOE2(3)                                 <---------MYB59--          --------->TOE2(3)--------------->AGL15                            <-----------HVH21  ------   ttgcccaaataatctcaaaatactccttcctaaattgagattaatcaagattaagacacatctaaactgatcaaactatgtcatgtcctaattgaaatta  15914200        <----------ID1    --------->CCA1(2)                                         <---------LBD16   <---------ARR11(3)                                        --------->MYB52(1)----------->ARR10 -------ATHB12                                     ------->TEIL      --------->WOX13(1) ---->WOX13(1)       --------->ANAC46          <---------TOE2(3)   <------ZmHOX2a(2) ----AHL20(2)        --------->ANAC58        <---------AHL20(2)<---------ANAC55(2) ------>ZmHOX2a(2) ------->YAB1        --------->ANAC58        --------->AHL20(2)--------->ANAC55(2)<------ZmHOX2a(2) --->AHL20(2)  --------->AHL20(2)----------->RAV1(1)   ---------->DOF2 <---------ATHB12   atcaagatttaagacaaataaacacacaatgtctccaacatttgaaattaatgaaccaaaagcttacggatcaatgagggtgagatcggaatcgaattga  15914300                                <---------ATERF1(1)                                ------>NtERF2                                --------->LBD16                                --------->ABI4(1)                               --------->RAP2.6(2)                               --------->RRTF1(3)                               --------->RRTF1(2)                               --------->ATERF1(2)                               <---------ATERF1(2)                               --------->DEAR3(1)                               <---------DEAR3(1)                               --------->RAP2.3(2)                               --------->RAP2.3(3)                              --------->RAP2.6(1)                              --------->ATERF1(1)                              --------->RRTF1(1)                              --------->ORA47(2)                              --------->RAP2.3(1)                              --------->ERF1                              --------->DEAR4(2)                             <---------ATERF1(1)                             --------->LBD16                             <---------At4g35610                             --------->At4g35610                             <---------RAP2.3(1)                             ------>NtERF2                            --------->ANAC46                         --------->ARR14(2)                         <---------ARR14(2)                         --------->GLK1(2)                     <------NtERF2                    ------>NtERF2--------->RAP2.3(1)                    <---------DEAR4(2)                   <---------ATERF1(2)                   --------->ATERF1(2)                  --------->DEAR3(2)                                   --------->GLK1(2)                  <---------LBD16<------NtERF2                        --------->ARR14(2)                  --------->ATERF1(1)                                 <---------ARR14(2) --------->HSFC1(2)<---------DEAR3(1)                    <----------DOF2    <---------MYB52(1) --------->HSFB2a(1)--------->LBD16        <---------ATHB12   ------>ZmHOX2a(1)    <---------AtLEC2 <---------HSFB2a(1)<---------ATERF1(1)  --------->WOX13(1) ----------->RAV1(2) <-----------GT1 <---------HSFC1(2)--------->DEAR3(1) --------->YAB1    <---------DAG2<---------GLK1(2)   agaaatttcgaagcgagagagccggcgattccgccgccgataacaatcactctcttcccctttcctgatacagattctgttttttccatgtcttcgtgat  15914400                     --------->KAN4(2)                    <---------KAN4(1)                    <---------HSFC1(2)                    --------->HSFC1(2)                    --------->HSFB2a(1)                    <---------HSFB2a(1)                    --------->KAN4(1)                   <---------TOE1(2)                   <---------KAN4(2)                                                   <---------ANAC46               <---------HSFB2a(2)                                                    <---------LBD16               --------->HSFB2a(2)                                                   --------->MYB52(1)               --------->HSFC1(1)                            <---------AHL20(2)     ----------->HVH21           <---------GLK1(2)                                 --------->AHL20(2)     --------->WRKY12          --------->HSFC1(2)                           --------->YAB1        <----------DOF2          <---------HSFC1(2)                          <---------ATHB12  --------->MYB52(1)          <       ---------->DOF2                              --------->WOX13(1)--------->MYB46(3)           --   tcaaaaatccaaagcttctcgaatgttctccaatttgagtttcgatttctatatcaatcagatttatatacaaacaccggtttaagttgacggagagaga  15914500                                                           <---------RAP2.3(1)                                                           ------>NtERF2                                                          --------->ATERF1(2)                                                  <-----------HVH21                                                 <---------O2                                                 --------->TGA1a                                                 <---------TGA1a                                                 --------->DEAR3(1)                                                 --------->bZIP60(2)                                                 --------->O2     <---------HSFB2a(1)                                                 <---------bZIP60(1)                                       --------->TGA2(2)  <---------RAP2.3(3)                                      <-----------HVH21   <---------DEAR3(1)                                      <-----------TGA1    <---------ATERF1(2)                                     <---------ANAC55(2) --------->ATERF1(1)                                     <---------ANAC58  --------->At1g77200         <---------ANAC58                                     <---------O2<---------bZIP60(2)--------->ARR11(3)                                     --------->O2--------->bZIP60(1)--------->ARR14(2)                                     --------->bZIP60(1) --------->SPL7            <---------ANAC58                                     <---------TGA2(1) --------->DEAR3(1)          <---------ANAC46                                     <---------bZIP60(1) <------NtERF2             <---------ANAC55(2)                                     --------->bZIP60(2)<---------ATERF1(1)        --------->ANAC55(2)                                     <---------TGA1a  --------->ATERF1(1)          <---------ANAC55(1)                                     --------->TGA1a  <------NtERF2 <---------ARR11(3)         *TSS                                     <---------bZIP60(2)------>NtERF2           --------->ARR14(2)                                     --------->TGA2(1)--------->RAP2.3(1)       <---------ARR14(2)                                     ======================bZIP_bZIP<---------ARR14(2)         ------                                     <---------ANAC46 --------->DEAR3(2)     <------NtERF2   --------                                     <---------ANAC58<---------RAP2.3(1)   <---------bZIP60(2)<------                                    ----------->STF1 ------>NtERF2--------->HSFC1(2)         <-------                                  ----------->TGA1<---------ATERF1(1)<------ZmHOX2a(2)       --------                           --------->REM1(2)  ----------->HVH21   <---------HSFC1(2)         <-------                          xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------NtERF2  <---------ANAC58  --------                        --------->ANAC55(2)=================================HOX2a_HOX2a--------->ARR11(3)                        <---------ANAC46  <---------At4g35610     --------->HSFB2a(1)<---------MYB52(1)                        <---------ANAC58  --------->At4g35610  <------NtERF2 --------->ALFIN1--------                        <---------ANAC55(1)==================================HOX2a_HOX2a     --------                        <---------ANAC58<-----------RAV1(2)<---------ATERF1(1)<---------MYB46(3)                    =======================================bZIP_DOF=============================HOX2a_HOX2a                    ===========================bZIP_DOF----------->HVH21   <---------ANAC58  <-------               <---------ANAC58 --------->At4g35610  <---------ATERF1(1)========================HOX2a_HOX2a               <---------ANAC46 <---------At4g35610 <---------DEAR3(1)  ------>ZmHOX2a(1)    --------       --------->TOE2(3)<---------ANAC55(2)<------ZmHOX2a(1)<---------LBD16<---------ANAC46 <--------  <---------KAN4(2) <----------DOF2<---------TGA2(2)--------->DEAR3(1)------>ZmHOX2a(2)<---------ARR11(3) ------ZmHOX2a(1)<---------AtMYB61----------->HVH21--------->ATERF1(1)----------->RAV1(2)------>ZmHOX2a(2) --------->GT1 <---------ANAC58<---------TOE2(3) <---------DEAR3(1)<------ZmHOX2a(1)--------->LBD16   gaggaataaacttaattgtgtggtttacgtgttgaggtgacgtcaggagcgacgtcgccgacggcggaaggatcctggcgtggttccgtgatcttacgtc  15914600       <--------P   <-----------RAV1(2) --->TGA2(2) ->ANAC46 -----TGA1                                           <---------TOE1(3) --bZIP60(1)                                         <---------TOE2(3) ->ANAC58                                           ---------->DOF2 --ANAC55(2)          <---------YAB1    <---------YAB1 ->ANAC55(2)        <---------ICU4   <---------AHL20(1)                                ---------->DOF2 ->bZIP60(1)        <--------HAHB4   <---------ARR11(3)                            <---------AHL20(2) ->TGA2(1)         <---------YAB1    --------->AHL20(2)                      ----------->GT1 --TGA2(1)         --------->ICU4    --------->AHL20(1)               <---------------AGL15  ------>NtERF2 ->ANAC58--------->ANAC58   <----------DOF2      <----------DOF2      =============================== ---STF1 --------->ANAC58<---------YAB1--------->AHL20(1)    ---------->DOF2<---------ZAT6  ---------   attactcaggtaagccaactcattattattctttttcaaaatattatgggcctttaaagttgggaaagaggcccattagtggtataaatttaagcgggcc  15914700                       <---------TOE2(3)             <---------ICU4             --------->ATHB12             --------->ATHB51             -------->ATHB1            --------->ICU4                        <---------MYB59            <---------ATHB51                    --------->SPL7            <---------YAB1                ------->TEIL         ------------>ATHB5  <---------LBD16--------------->AtSPL3                            -------         <-----------------AGL2           <---------ARR14(2)                           --------->ATHB12         ----------------->AGL3       --------->ZAT6                                  <---------YAB1 <---------ANAC58      <---------TOE1(3)  --------->ARR14(2) ------>MYB83      --------->ANAC58 <---------ANAC58      <---------------AtSPL8 <---------SPL1(2)            ----------->GT1    <------ ==========================MADS_MADS<-----------GT1     <-----------GT1  ---------->DOF2 <---------WOX13(1) >ZAT18  <-----------------AGL3--------->LBD16<---------SPL7 ------>MYB46(1)   --------->ANAC58   attgtttgctacccattattgggttaaggtacccggtttaactgtatccgtaccgaataaaccaaatcgaaacgagaaagtaagaaatgtgattggattt  15914800                                                      --------->ATHB51                                                      --------->ATHB12                                                      <---------ICU4         --------->AHL20(1)                                             ------>MYB46(1)                 <---------ARR11(3)                                             ------>MYB83                    <---------AHL20(1)                               --------->GLK1(2)     --------->ICU4    <-----------GT1                               <---------ARR11(3)    <---------YAB1  <---------YAB1                               --------->ARR11(3)  --------->YAB1  -------->ATHB1                              --------->RVE1(1)   <---------ATHB12 <---------ICU4                            --------->AHL20(2)--------->MYB46(3)   <--------HAHB4 -->GLK1(1)            --------->AHL20(2)   ----------->RAV1(1)    --------->ATHB51 ---GLK1(1)           --------->AHL20(2)  --------->MYB46(3)      --------->ICU4   cagtttttttaggggacaatcccattaaaaaaaaatctaacaaaaccaacaaatcataattgcaacgaattattaacaaaatattctaactaattcatac  15914900                                                                                         <---------SPL7                                                                                    <xxxxxxxxxxxxxxxx                                                                                   <-----------HVH21                                                                                   <-----------TGA1                                                                                  <---------ANAC58                                                                             --------->MYB52(2)                                                                           <---------MYB52(1) -------                                                    <---------YAB1         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                              --------->AHL20(1)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    ------->TEIL              <---------AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          --------------->AtSPL3              <---------AHL20(1)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------------->AtSPL8--------->YAB1--------->AHL20(2) --------->YAB1   <---------bZIP60(1)        <-----------GT1 ----------->GT1      <---------ATHB12 --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------AHL20(2)      <---------YAB1--------->AHL20(2) <---------YAB1    <---------ANAC58---       --------->AHL20(2)     --------->AHL20(2)  <-----------GT1<--------HAHB4   --------->bZIP60(1)   atttctcatttaaacgtactcgtacctagtaatattatagtaaaccaataaattaccattgcaactataattagtctgtttgtttcgtcaccgtatgcga  15915000                                                                                        <---------At4g35610                                                                                       <---------ANAC58                                                                                       <---------MYB46(3)                                                                                       <---------ANAC58                                                                                     ------>NtERF2                                            <<<<<<<<<<ABI5                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                            <---------ANAC58                   ------>NtERF2                                            <---------ANAC58                  --------->RAP2.3(3)                                            <---------ANAC46                  --------->DEAR3(1)                                          <---------TGA2(2)                  --------->ATERF1(1)                                         ----------->TGA1                    <------NtERF2    <------                                         ----------->HVH21                   --------->ORA47(2)                                       <---------At4g35610                   --------->RAP2.3(1) <---                                       --------->ZAT2                       ------>NtERF2     -------                                       <---------ZAT2<---------AHL20(2)     <---------RAP2.3(1)<-----          <-----------GT1       <---------ANAC58    --------->AHL20(2)      <---------ATERF1(1)<-----  --------->At5g28300           <---------ANAC58    <---------AHL20(1)   <---------ATERF1(1)  ------>NtERF2 ------->GAMYB               <---------MYB52(1)     <---------AHL20(2)   <---------TGA2(2)  <-------- ----------->GT1           --------->MYB52(2)       --------->AHL20(1)  ----------->HVH21   <-------- xxxxxxxsmallRNA(si3) <---------YAB1   --------->At4g35610            <---------At4g35610<---------MYB52(1) ---->HVH21        <---------YAB1   <---------At4g35610<---------YAB1 --------->At4g35610--------->ATERF1(1) ------>MYB52(1)  <---------GLK1(2)<---------DEAR3(1)--------->AHL20(2) ----------->TGA1<-------GAMYB   caacggtaaattttaccacagattattgttcgtttcgtcgctgctgacgtataatttatttttgtttgatgatgctgacgccgactctgccgttgccgca  15915100  Previous    Next  AGI:  At3g44190.1    Description:  pyridine nucleotide-disulphide oxidoreductase family protein. similar to pyridine nucleotide-disulphide oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT5G22140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62380.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103) Range:  from: 15912784    to: 15914595    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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