Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->YAB1             <---------ARR11(1)                                             <---------ICU4             --------->ARR11(3)                                            <---------YAB1              <---------ARR11(3)          <                                          --------->YAB1               <---------CCA1(2)    ------->TEIL                     --------->WOX13(1)--------->YAB1                --------->YAB1 --------->YAB1 -- -----ICU4  <---------YAB1       --------->YAB1                    ------->TEIL >>>>>>>>>EIN3      <-   atgcctaaaacattctaattcatcaattaccacaaacataaacatcatcataactatacaaatgaaatgaatcatatcttatacattgaaaatgaatgta  15902600                                                                                      <---------ZAT2                                                                             ----------------->AGL2                                                                        --------------->AtSPL3                                                                       --------->GLK1(2)<---------ZAT14                                                                      <---------GLK1(2)<---------ALFIN1                                             ----------->GT1        --------->LBD16 <---------HSFB2a(2)                          ---------->DOF2   <---------TOE2(3)      <---------HSFB2a(2)--------->ZAT2                       --------->ANAC58     <---------TOE1(3)      --------->HSFB2a(2)<---------At4g35610 ---------YAB1 ----------->GT1     --------->ATHB12         --------->YAB1<---------SPL7--------->ZAT14 ------->ARR11(3)      --------->ANAC58<---------MYB46(3)   --------->AHL20(2)      --------->HSFB2a(2) --------ARR11(3)    ---------->DOF2 <---------MYB52(1)    <<<<<<<<<ARR2--------------->AtSPL8 <-----   agataatagaagaaaaatggaaacaaagcaaagccctccattggttaaggttaaatccacaatcaaattccagaatcgtaccatttccagcacagtatca  15902700                                                                                          <---------ZAT2                   ----------->RAV1(1)                                                    --------->ZAT2                ----------->RAV1(1)                                                       --------->GLK1(1)             --------->ANAC58                                                             --------->At4g35610             --------->ANAC46                                                        <---------At4g35610             --------->ANAC58                      --------->CCA1(2)                 ----------->RAV1(2)     ------>MYB46(1)                             --------->YAB1                      --------->At4g35610     ------>MYB83 --------->REM1(1)        --------->GLK1(2)                  --------->ARR14(2)    --------->MYB55(1)                     <-----------ARR10                ----------->ARR10   <---------MYB59--------->MYB46(3)      <---------GLK1(2)              <---------ANAC46 <---------At4g35610 ------GT1 ------>ZmHOX2a(2)  ----------->GT1   <---------TOE2(3)   -------->P<---------ARR14(2)   cattacctactgatccagcaacaacacaaaattcgaaaaatcgagaatctaagataagagtgatgacctctaccagcgtggatactcttctgagctccca  15902800                                     <---------------AGL15                                    <---------------AGL15                                    <-----------------AG                                    ----------------->AGL3                                    --------------->AGL15                   --------->DAG2       <---                                    ==================================================MADS_MADS------                                   ----------------->AGL2                  ---------->DOF2   <-------                                   --------->ANAC58                   --------------->AGL15  <-------                        --------->YAB1                       --------->ANAC58            <---------AHL20(2)                       <---------ATHB12      <------ZmHOX2a(1)    <---------ATHB12      <---------YAB1                      -------->P   --------->ANAC58          --------->ANAC58        --------->ICU4                     --------->WOX13(1)    <---------TOE2(3) --------->ANAC46     <------ZmHOX2a(1)   tggcgatggaatgagagaagaatcaaccatgaagagaacccaatttaggaattggcattagacaagcaatgaccagaaaaaggaggaatttttatttact  15902900                                                  --------->ARR14(2)      <----------DOF2                             <---------ARR14(2)             --------->ANAC58 ------ICU4          <------ZmHOX2a(1)           <------ZmHOX2a(1)               --------->ANAC58 --->ANAC55(2)    <-----------RAV1(2)          <---------TOE1(3) <---------RVE1(1) ----GT1      <<<<<<<<<TBF1                    <---------TOE2(3) <---------CCA1(1) --AHL20(2)<<<<<<<<<TBF1           --------->At4g35610     <----------DOF2 *TSS---------->DOF2   tatttcttctttcttcttcttcaggagtgaatgaattagcagagaggttaaggatttgatgctttggatatttttagagaagaaagcaagtttgggttta  15903000                                              <---------PCF2                                          <-------MYC2                                          ------->MYC3                                          ------->MYC2                                          <-------PIF5                                          ------->MYC4                                          <-------MYC4                                          ------->PIF5                                          <-------MYC3                                         <---------TGA1a                                         <---------O2                                         --------->ANAC46                                         ===========================MYC_MYB                       <----------DOF2   --------->O2------>ZmHOX2a(2)                       <---------DAG2    --------->TGA1a--------->REM1(1)                      --------------->AGL15--------->ALFIN1                     ----------------->AG--------->PIF3(3)               <----------DOF2           <---------PIF3(3)               ====================================bZIP_DOF             ---------->ID1          <----------------PIF3(2)           <---------ANAC58     <----------DOF2    <---------ARR11(3)                           <----           <---------ANAC58     ===================bZIP_DOF    <<<<<<<<<WRKY18               <-------        <----------DOF2============================bZIP_DOF  <-----------HVH21              ---------        ===========================================bZIP_DOF ------->GAMYB                   <--------   <-----------GT1 <-----------GT1  <-----------GT1--------->AGP1                     <---------YAB1-   tgttttatctctttcgtctttattcctttttgggcttttatccacgtgggcctgatctacaactgtcaaaaacacattaccatgagttatgaaaaatatt  15903100         --------->ATHB12         <---------ICU4      <---------ICU4      --------->YAB1     <---------YAB1   --------->YAB1   <---------ICU4  <---------ATHB12                                                       <---------CCA1(2)  --------->ICU4                                                 --------->ATHB12 -------GT1                                                     --------->ICU4 --ICU4 <---------YAB1                                 --------->At4g35610 >AHL20(1)                                       <---------TOE2(3) --------->ARR14(1) -AHL20(1)                                 <---------TOE2(3)    <---------YAB1            <---------AHL20(2) -------->YAB1                     <---------At4g35610 <---------At4g35610   <----------DOF2  -------   actaatcatcatcatttgttttttaaaacttgagtttagctgtttgagattgaggtctgatgagttatgattcgcttatctttttgagttatatttttgt  15903200                                 --------->AtLEC2                    <---------ATHB12                                 --------->ANAC58             ---------->ID1                                 --------->ANAC46         <----------DOF2                                 --------->ANAC58      <---------AHL20(2)                                ------->MYC2        --------->AHL20(1)                                <-------MYC3        <---------AHL20(1)       ----------->GT1          <-------MYC2        --------->ARR11(3) ---->GT1      --------->TOE2(3)------->MYC3        <---------ARR11(3)   aaaattgttaagttaaaacttaaccaaaaaaacacatgcaacttctaagaagaatattttctttgtcttaaatcaatttgaataatgggagaaaaattgt  15903300                 -------->HAHB4                 <---------ICU4                 --------->YAB1                --------->ICU4                <---------ATHB51                <---------YAB1                                    --------->YAB1              --------->YAB1                      <---------AHL20(2)                          <------            --------->AHL20(2)            --------->At4g35610    <---------YAB1              <-------            --------->AHL20(1)         <---------YAB1      --------->AHL20(2)                --------           --------->YAB1           <---------YAB1--------->AHL20(2)                    <---------ANAC46         --------->AHL20(2)       ----------->GT1--------->AHL20(2)         ----------->GT1 <--------   tgacgaaaaaaaaaaataataatgggagaaaaaatgttgttattatctgaattttattcaataacatatcataaaaaatagtttataatgtcttatatat  15903400                                      ----------->GT1                                     <---------TOE2(3)                                --------------->AGL15        --------->ETT(2)                                ======================================MADS_MADS <-----------GT1                <---------------AGL15 ------>ZmHOX2a(1) ---AHL20(2)                  <-----------------AGL1  <---------------AGL15 --AHL20(1)                   ========================================MADS_MADS                    <- ->AHL20(1)                   <-----------------AG--------->ARR14(2)                <---------AHL20(2) -CCA1(2)               <---------TOE2(3)         <---------ARR14(2)           <---------YAB1      --   ttgtaacatttttgaatttttgaatttatgttttctattttggttaaaatcaaatcctatttgtagacatatatgaaaatgctgattttttttttgttta  15903500  Previous    Next  AGI:  At3g44160.1    Description:  chloroplast outer membrane protein-related. similar to chloroplast outer membrane protein-related [Arabidopsis thaliana] (TAIR:AT3G48620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70670.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184) Range:  from: 15899889    to: 15902975    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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