Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ----------->GT1                                                        ----------->GT1   <---------------AtSPL8                                                      ---------->DOF2     --------------->AtSPL8                     --------->ARR14(2)      --------->ANAC46 --------->ARR11(3)          --------->ZAT14                  <---------HSFB2a(2)      <---------HSFB2a(2)<---------ARR11(3)          <---------ZAT14                  --------->HSFB2a(2)      --------->HSFB2a(2)--------->GLK1(2)    --------->YAB1 <----------DOF2 <---------LBD16 ---------->DOF2--------->MYB52(1) <---------TOE2(3)  <-----------GT1   ttccttttgtttattgtcttctggatacaatagcacaaagtctttctacaaaacagaaaagaaaaatctaatgtaaatggtactaaaataactacacaga  15795800                                                                                  --------->TOE2(3)                                                                                  --------->TOE1(3)                                                                                --------->ARR11(3)                                                                                --------->GLK1(2)                 --------->ANAC58                 <---------REM1(1)   --------->YAB1                 --------->ANAC46                 ----------->GT1    <---------AHL20(2)                 --------->ANAC58              --------->MYB52(2)   --------->AHL20(2)        -------        <---------YAB1 <----------DOF2       <---------MYB52(1)     <---------AHL20(2)       <-------   <----------DOF2     <---------DAG2      --------->YAB1 <---------YAB1        <---------ARR11(3)   tagaacttttattcttatcacacaactttttttttttttgtctaatcgtaagttgtaactcttattgttttttaataaacaaaatcttaaaacaaatcaa  15795900                                                    <---------ANAC58     <---------ZAT14                          ------->TEIL              <---------ANAC58     --------->ZAT14                       --------->AtLEC2   <---------ICU4             --------->ZAT6 -->YAB1        <---------ANAC58       --------->ANAC55(2)         -------->P --ATHB12       <---------ANAC58       <---------ANAC55(2)   ---------->ID1 --------->TOE2(3)   aactcaccagtctatattgtttgccatgaaactcgaatgtctcgtaatgacatttcttgttttgtcccttaccagtaaacttaatcggtttaccaattga  15796000                                 <----------DOF2                                <---------ANAC58                                <---------ANAC58                            <----------DOF2                       <---------ALFIN1              <----                      <---------HSFB2a(2)                       ------>ZmHOX2a(1)            <-------                      --------->HSFB2a(2)                      --------->ANAC46          <---------MYB52(1)                    <---------ZAT2                     ------>ZmHOX2a(1)              <------NtERF2 <                    --------->At4g35610           <---------GLK1(1)                ---------->ID1   <                    --------->ZAT2    <<<<<<<<<TBF1   --------->TOE2(3)        <----------DOF2  <----   cttcgcacaatcgctcggtctctgctcgaactttgctttcttcttcacttgcatttccttactctcctccacccttctcttctttgtcgtcgtttctttg  15796100        --------->ETT(2)   --------->MYB52(1) <----------DOF2                     --------->bZIP60(2)                                          --- -----ANAC58                       <---------ALFIN1                                               --- ---DOF2<---------ETT(2)          --------->MYB46(3)                                     --------->ANAC46 ---------ANAC58             --------->YAB1                                   <----------DOF2-------- ---------ANAC58            <---------ATHB12      <---------ANAC58      XXXXXXXXXXXXXXXXXXXX>MIR396A -----ANAC58              --------->WOX13(1)      <---------ANAC58      XXXXXXXXXXXXXXXXXXXX>MIR396B   gtgcttaacgtcgacaatggaacattgtcaatcacaaccacttcattcgattgctggatggacatgtctatcgtccacaactttcttatacgagtcacaa  15796200                                                                           <--------ATHB1                                                                           <---------ICU4                                                                           <---------AHL20(1)                                                                           --------->AHL20(2)                                                                           --------->YAB1                                                                          --------->ICU4                                                                      ------------>CBF               --------->ARR14(2)                                     --------->MYB46(3)               <---------ARR14(2)                                   <<<<<<<<<GT-1   --------->YAB1          --------->ANAC46                  <---------ICU4--------->ATHB51  --------->ICU4       <-----------GT1                       <-----------GT1                        - ------>YAB1  <---------GLK1(1)     <---------MYB46(3) --------->TOE2(3)  <---------ATHB12      ----- ------>AHL20(2)    <---------MYB52(1)         ---------->DOF2      <-----------GT1             ----- ---->CBF <-----------GT1<-----------GT1    --------->YAB1--------->YAB1  <---------ATHB51     ------   tgaaattataagttacaaatccgtttttcaccctacagttgttgaatcaaaaagaaacattaataactattaaccaataattttcaaatagattagtcac  15796300                  --------->ARR14(2)         <---------MYB59        ----------->RAV1(2)                          --------->KAN4(1)       ------->TEIL                                  <---------KAN4(1)     --------->ZAT18                                <---------KAN4(2)     <---------ZAT18                     --------->CCA1(2)   <---------------AtSPL8--------->MYB46(3)   <---------ANAC58   --------------->AtSPL8--------->AtMYB61    <---------ANAC58 --------->DOF2   <---------ARR14(2)   <<<<<<<<<RAP2.2 ---->ANAC58     <---------CCA1(2)    ----------->ARR10   <----------DOF2                        ---- ---->ANAC58   --------->YAB1    <---------ATHB12   ---------->TaMYB80                          <---- --->WOX13(1) <-------TEIL   ------------>CBF <---------ANAC46         <----------DOF2          -----   tcaaaagtgtacctgattcatatcccaccagaccaatgtttagatatgtcttggaatatgcttttctcagcctctttcttataaactggattatatcaac  15796400         --------->ZAT6        --------->ZAT14                         <---------AHL20(2)        <---------ZAT14                     --------->AHL20(2)        <---------ZAT18                  <----------DOF2                                ----------->GT1        --------->ZAT18                  <---------DAG2                          ----------->GT1 --->GAMYB --------->ANAC46           <---------ALFIN1                      ---------->DOF2 -----MYB52(2)                     <-----------GT1                      <------ZmHOX2a(1) ---->MYB46(3) ---------->DOF2    <-----------GT1           --------->YAB1 <------ZmHOX2a(1)  -------   aaacaaatactacactacaaagaatttagttcatattttcccacttttaaataaacgcttaataagaaatataaggaggaaagagggaaaatgaaaaaaa  15796500                                                                          --------->YAB1                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                         <---------YAB1                                                                       <---------ICU4                                                                       --------->YAB1                                                                      <---------AHL20(2)                             <---------TOE2(3)                        --------->ICU4                           <---------AHL20(2)                         --------->AHL20(2)          <--               <---------GLK1(2)                                      <---------ATHB51     ------->GAMYB               <---------ARR11(3)           --------->ANAC55(2)     --------->YAB1      --------->MYB52(1)               --------->ARR11(3)         <-----------GT1     ----------->GT1           <---------DOF5.7(2)      <---------GLK1(1)   --------->AHL20(2)<---------ANAC55(2)   --------->AHL20(2)   <---------WRKY45 --------->CCA1(2)   ---------->ID1   <---------YAB1          --------->ANAC58         <---------WRKY38(1) --->DOF2    ----------->ARR10        <---------AHL20(2)      --------->ANAC58         <---------WRKY12   gagatttgaaatcagtagattttgtccatataatgttttttttattacctgttaacagaaaaacaagaaaaaataattatataagggagtcaacgaaaaa  15796600                                        --------->ANAC58                          <-----------------AGL2                                        --------->AtLEC2                    <-----------GT1        --   <---------------AGL15         <----------DOF2                            --------->MYB52(1)     --   --------------->AGL15      --------->GLK1(2)                       ----------->GT1       <--------   ---------->ID1<---------AHL20(2)     --------->ANAC58            <---------ZAT14--------->HSFB2a(2)  <-----------------AGL2     <---------ARR11(3)                     --------->ZAT14<---------HSFB2a(2)  ==================================================================================================MADS_MADS  <-----------------AGL1     <---------GLK1(2)                 <---------bZIP60(2)<-----------------AGL3  <-----------------AG       --------->ARR11(3) ------->TEIL   <---------ANAC46   =================== --------DOF2    --------->AHL20(2)<-----------GT1          ----------->HVH21<---------TOE2(3)     --   cttttctcgttttggtcatttaaattacaaagattctttaccatgcaatgtattttgttaatgtgacctgtacagaaataacgttctaaaactggattat  15796700  Previous    Next  AGI:  At3g43990.1    Description:  bromo-adjacent homology (BAH) domain-containing protein. similar to bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G23120.1); similar to hypothetical protein OsI_002208 [Oryza sativa (indica cultivar-group)] (GB:EAY74361.1); similar to Os01g0527400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043228.1); contains InterPro domain Bromo adjacent region; (InterPro:IPR001025) Range:  from: 15793525    to: 15796165    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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