Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------AHL20(2)           --------->ARR11(3)                   --------->AHL20(2)           <---------ARR11(3)               <---------RVE1(1)                --------->ARR14(2)              <---------ARR11(3)                <---------ARR14(2)              --------->ARR11(3)             <---------TOE2(3)    <---------ALFIN1              <---------ARR14(2)             <---------TOE1(3)   --------->ZAT14              --------->ARR14(2)     <---------ATHB51          --------->ANAC46            --------->LBD16 --------->AHL20(2) <------ZmHOX2a(1) <---------ZAT18           <---------HSFB2a(2)       <---------ATHB12      --------->YAB1           --------->HSFB2a(2)   --------->AHL20(2) ----------->GT1            <----------DOF2-------   tgggtctgaacttccagatattaaaaaaaaaaaaatcaaataatgctaaggatattgaaaatcataccacactctccttgtcttttgactcttggaacaa  15786200                             <---------ANAC55(2)                       <---------At4g35610                             ----------->GT1         <---------ZAT6  --------->REM1(1)                           <-----------RAV1(2)--------------------->WRI1 ----------->HVH21                 <---------ATHB12             <----------DOF2    <---------At4g35610                --------->ANAC46     --------->ARR11(3)          --------->LBD16    ------>ZmHOX2a(1) <---------------AGL15------>ZmHOX2a(1)     --------->At4g35610  <----------DOF2 -->MYB46(3)   --------->WOX13(1)    <---------ARR11(3)         --------->ANAC46 <----------DOF2   <-   ctgctcctctctccctccaatcaacttcatcaggtaaaacatctccttctttgtactgatacctctccgctacatctgataggcttttcttttccatctt  15786300                                        --------->LBD16                                      ------>ZmHOX2a(2)                                     --------->CCA1(2)                                     <------ZmHOX2a(2)                                    --------->ARR14(2)                                    --------->AGP1                                    <---------ARR14(2)                          --------->MYB46(3)                                    ------>ZmHOX2a(2)              <---------ANAC46    ----------->ARR10                            --------->At4g35610              <---------ANAC58  <---------MYB52(1)            --------->YAB1   <---------At4g35610              <---------ANAC58 <---------RAP2.6(3)           <-------TEIL     <---------ARR14(2)             <---------STY1(2) <-----------HVH21         --------->LBD16      <---------AGP1             --------->STY1(2)<---------MYB46(3)       <---------LBD16        --------->ARR14(2)        <-----------GT1  --------->At4g35610           ------->GAMYB   --------->LBD16 --------ALFIN1          <---------At4g35610         -------->P      <---------LBD16          <------   cccacctaagtaactagcttgaaactcatcagccgttagatccgaaaacttgttcaacccgcgttcataactccggtttggatctgaattgtgttcttcg  15786400                       =======================HOX2a_HOX2a                       ------>ZmHOX2a(2)                      ========================HOX2a_HOX2a                      <------ZmHOX2a(2)                     --------->ARR11(3)                     --------->ARR14(2)                                               <---------ANAC58                     <---------ARR14(3)                                               <---------ANAC58                     <---------ARR14(2)                                               <---------ANAC46                     <---------ARR11(3)                                       --------->ANAC58              <----------DOF2--------->DEAR3(2)       <---------MYB52(1)      --------->ANAC46     --   <----------DOF2   --------->ARR14(3)              <-------GAMYB         <---------REM1(2) -------- ---------------WRI1 <---------AGP1    ------>ZmHOX2a(1)    --------->ARR11(3)--------->ANAC58     --   atgcgcttcaagttgtctttgaagatcttgaaccgtctctccttctctccaagaccgttatagttcttcccattctctacaagccattgctcgtacattg  15786500                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                                   <---------ARR14(2)                                              ------>NtERF2                                            <------NtERF2                                           ------>NtERF2      ------>MYB83                       --------->ATERF1(1)      ------>MYB46(1)                   <---------ATERF1(1)    --------->AtMYB61                  <---------bZIP60(1)    --------->DEAR3(1)                 <---------bZIP60(2)    <---------MYB111(1)                --------->bZIP60(1)    <---------ALFIN1                ----------->HVH21  ----------->GT1   --------->At4g35610       <-------GAMYB<---------DEAR3(1)  ----------->GT1  ------->TEIL              <-----------RAV1(1)    --------->ARR14(2) ------->ANAC58   <---------At4g35610  <---------O2--------->ARR11(1)                --------->ARR11(3) ------------->WRI1      --------->GLK1(2)--------->DEAR3(1)--------->ICU4       ---------->DOF2<---- ------->ANAC58   ------>ZmHOX2a(1) ----------->TGA1--------->CCA1(2)       ----------->GT1     -----   taagcacctccccttcattcctctgcgactctgttgctgtgacgacgccgagagatatggaaattagtaacaccgagagggtcaaaagagctagagttct  15786600                                                                                                  <--                                                                       <---------HSFB2a(2)<---------DEAR3(1)              <-----------GT1                 --------->HSFB2a(2)      --------->HSFB2a(2)<---------MYB46(3)      <-----------GT1            <-----------GT1                   <-----------TBP    <---------AtMYB61 -----HSFB2a(2)        <---------MYB52(1)   *TSS               <XXXXXXXXXXXXXXXXXXXXMIR2934       <-- ---->HSFB2a(2)   ------>ZmHOX2a(1)    <---------ARR11(3)    ---------->DOF2----------->GT1 <------NtERF2   aaaacttattgccatttctccttctgttttttttttaacttgatatttctgcaactcttaagtcaaagtatttgtagaaagaaaaattttggtcgtcgag  15786700                                                     <-------GAMYB                                                    --------->MYB111(2)                                                    --------->MYB55(2)                                                    --------->MYB52(2)                                                    <---------MYB46(3)                                                    --------->MYB111(1)          ----------->GT1                           --------->MYB46(2)                      <--------         --------->ALFIN1                         <--------P                   --------->ZAT18       <---------O2                              <-------GAMYB          <---------ANAC58  <---------ICU4     <---------ZAT14                            ----------->GT1         <---------ANAC46  --------->YAB1 -------ANAC58                             <------ZmHOX2a(1)            <---------ANAC58 <---------YAB1 -------ANAC58           ---------->DOF2<------ZmHOX2a(1)         ------->TEIL <---------ZAT18   gcttgagagaagtgggaaaacaaaaaacaaagtagaaatggaggaggagagggttagttggatagatgtatttttcgtatgggcactaactattatgaca  15786800                            --------->ATHB51                            --------->AHL20(2)                           <---------YAB1                           --------->ICU4                --------->YAB1                                         --------->AHL20(2)                <---------ICU4    --------->ANAC55(2)             --------->AHL20(2)               --------->ICU4   <-----------GT1                   --------->ATHB51           --------->ICU4<--------HAHB4                      --------->ANAC55(2)           <---------YAB1-------->ATHB1                      --------->ANAC46         -------->HAHB4  <---------ICU4                      --------->ANAC58         --------->YAB1  --------->YAB1                      --------->ANAC58                   <----         <---------ICU4 <---------ATHB12                     --------->ANAC55(1)    <---------ANAC46        --------->ICU4--------->WOX13(1)                     <---------ANAC55(2)    <---------ANAC58        <---------ATHB51--------->ICU4                  ----------->HVH21           <---------ANAC58    <---------MYB59--------->YAB1<---------TOE2(3)<---------AHL20(2)  --------->AHL20(2)   <--------- -YAB1  <---------ATHB12<---------YAB1           <---------AHL20(2)   <---------AHL20(2)   <---------MYB52(2)   agttggcctaataatgaataatgacaatcattatttacgttttttagtttttttatttgtgacacgcattatttaaaatagttttggcttgaaactaact  15786900                                                               ----------->GT1                                                              --------->ANAC58                                                              --------->ANAC58      ---------->ID1                                                       --------->ANAC58  ----------->GT1 <---------TOE2(3)                    ------>ZmHOX2a(1)--------->ANAC46  <---------ANAC55(2) <---------TOE1(3)         --------->ANAC58     --------->ARR14(2)       <---------ANAC58 ------DOF2---------->DOF2 --------->ANAC58     <---------ARR14(2)       <---------ANAC46           - ---MYB.PH3(2)      ------->TEIL      <----------DOF2  --------->ANAC58  <---------ANAC58  --------->ANAC46   tttatggtttggcaaaagaatgaatttgaacgaaaatgtcctttgtttcgaatttggacgaaacaaggaaaaaatgcgtaaaatttgtagttttcgccat  15787000                       <-------TEIL                       ------->TEIL                                    <-------TEIL<-------TEIL<-----                <---------PCF2                              --------->ATHB51     --------->TOE2(3)             --------->ALFIN1                               <---------ICU4     <---------TOE1(3)           <---------ANAC58                  <---------AHL20(2)       <-----------GT1          ------           <---------ANAC46    <---------ANAC46            --------->ICU4      <---------TOE2(3)  <--           <---------ANAC58<-------MYC3     --------->AHL20(2)       <---------ARR14(2)        <-----          <---------MYB46(3)<-----------RAV1(1)            <---------MYB52(1)<-----------GT1  -------       --------->CCA1(2)   ------->MYC3     <---------AHL20(2)       --------->ARR14(2)     --------- --------->DOF2----------->HVH21  <-----------HVH21------->TEIL<-----------GT1<-----------GT1 <------   aagaaagagagatgggtgggacatgtacatgtgttgtgtcagacaaataaatgaatatgccattatttcaatatacgttttaacgttcatcttctcataa  15787100  Previous    Next  AGI:  At3g43960.1    Description:  cysteine proteinase, putative. Identical to Probable cysteine proteinase At3g43960 precursor [Arabidopsis Thaliana] (GB:Q9LXW3); similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT3G19400.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60578.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201) Range:  from: 15785042    to: 15786644    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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