Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                               ------                                                                                             <-------                                                                                             --------   --------->TOE2(3)             <------ZmHOX2a(1)                                          <-------- ------>NtERF2               --------->LBD16                                           <----------DOF2 -------At4g35610          <---------LBD16            --------->WRKY45              <----------DOF2 ------>At4g35610     --------->YAB1                  --------->WRKY38(1)          <---------ANAC58 < --->YAB1             <---------ICU4                  --------->WRKY12             <---------ANAC58-- ---YAB1            --------->GLK1(2)          ------>ZmHOX2a(1)              <---------AtLEC2<------ZmHOX2a(2)   tgctgccttagagtcggaagagaatcatcaccggaggaagaagagtctccttctcgttgactcatcgctaaaacactcttgaatggcttctttgagatcc  15714700                            <---------GLK1(2)                            <---------ARR14(2)                           <---------HSFC1(2)                --------->ARR14(2)                           <---------HSFB2a(1)      <---------GLK1(2)                           --------->HSFC1(2)       --------->ARR11(3)               --------->ICU4                 --------->WRKY38(1)                <---------ARR11(3)         <---------ATERF1(2)               --------->At4g35610        ------>NtERF2      <---------ARR14(2)--------->DEAR3(1) ----->ANAC46  --------->LBD16         ------>NtERF2<---------ARR14(2)         --------->ATERF1(2) >ZmHOX2a(2) <---------LBD16--------->KAN4(2)   --------->YAB1   <-----------HVH21 ---------->DOF2 --ARR11(3)<---------ARR14(2)         --------->DEAR3(1)   --------->LBD16     --------->DREB2C(2) ->ARR11(3)--------->ARR14(2)    ------>ZmHOX2a(1)  --------->ARR14(2)        <---------LBD16       - -GLK1(1) <---------GLK1(1)--------->HSFB2a(1)  ---------->DOF2 <---------ANAC46--------->LBD16    <- ---------ALFIN1<---------MYB52(1)    ----------->HVH21  <---------LBD16  <-----------HVH21 --------- ------->MYB46(3)----------->HVH21  ------>ZmHOX2a(1)--------->GLK1(2)    ------>ZmHOX2a(1) <--------   caccacgactacatatccggtgactgagaagattcctcctccgacgactataaagattctccggtttcgtcaagtccttcaccggcaaagatgaagtttc  15714800                                                                                               <-----                                                                                              <------                                                                                             <-------MYC2                                                                                             ------->MYC3                                                                                             ------->MYC2                                                                                             <-------MYC3                                                                                          <---------ALFIN1 --------->DOF2                                                                      --------->ALFIN1 --------MYB52(1)                                                                   ------->MYC3 >HSFC1(2)                 <----------DOF2                                          <-------MYC3 -HSFC1(2)      <----------DOF2                      ------>ZmHOX2a(1)         <---------AHL20(2)   cgataagctcatgaacgactttgacttccctttgtaaaactttgatatagctctcctaaaatgaagtcaatattcagacattaaaacgtgttccacgttc  15714900                                                    --------->ANAC58                   --------->YAB1        --------->ANAC55(2)                --------->WOX13(1)       <---------ANAC58      --------->ZAT6                     <---------ANAC58 --TEIL--------->TOE1(3)         --------->YAB1     --------->ANAC58      --------->YAB1 -----HVH21  ------------------------>ANAC81--------->ATHB12        --------->GLK1(2)<------ZmHOX2a(1)   agacattaaccctagaaacaatcagacaaaaacaatgacacttacttgatgggcaaggcttcttcaagagattccatcatatcaagaggaccattgtaag  15715000                                                                               --------->ANAC58                                                                   --------->DEAR3(1)                                                                <---------ETT(2)                                                                --------->DEAR3(1)                ---                                                                <---------DEAR3(1)                ---                                            --------->LBD16  --------->O2      --------->ANAC58<-----                                     <---------ZAT14         <---------O2  --------->ANAC58   <------                               <-----------HVH21        --------->At4g35610--------->ANAC58  --------                               <-----------TGA1 <------ZmHOX2a(2)<---------ATERF1(1)         ------>ZmHOX2a(2)                  <---------ALFIN1   --------->ZAT14  --------->YAB1------>NtERF2   <---------GLK1(2)   aagactcaatctcattctctccaccttcatcgtcgtcactgttctccccgatcgaatcagaagacgtcgacgacgataagcaagcaaattcttgatccac  15715100          <------ZmHOX2a(2)                                 --------->ARR11(3)                     -- ---------->DOF2                                      ----------->GT1                             <-- ------>LBD16                                       ----------->GT1                              <--- ------>At5g28300                                  --------->DAG2    --------->WOX13(1)          ---- ----At5g28300                       <---------AHL20(2)     --------->GLK1(2)                    ---- ---ALFIN1<---------ATHB12  --------->At5g28300  ---------->DOF2   ------------>CBF      <---------ARR11(3) ->MYB46(3) --------->WOX13(1)       --------->AHL20(2)     <---------ARR11(3)           --------->ARR11(3)   cgtgaaagtccgatcaatcttgtcaatggcagtaaacatttttttagagagaaaaggtgaaaaatctttgtcaatccatagagaaatagaagataatgag  15715200                                                                                         <---------YAB1                                                                                    --------->YAB1                                                                                    <---------ICU4                                                                                   <---------YAB1                                                                                <---------YAB1                                                                    <---------ARR11(3) --------->YAB1                                                                    --------->ARR11(3) <---------ICU4                                                                ---------->DOF2<----------DOF2                                                         ----------->GT1    --------->ARR11(3)       --------->CCA1(2)                                <---------TOE2(3)   --------->GLK1(2) ---->ZmHOX2a(2)                  --------->ZAT18      --------->DAG2       <---------ARR11(3) ----ZmHOX2a(2)          <---------MYB52(1)           ---------->DOF2--------->CCA1(2)<---------YAB1 ------ARR11(3)        <---------ANAC58          <---------------AGL15     --------->RVE1(1) ----->AGP1   --------->GLK1(2)   <---------ZAT18--------------->AGL15   <---------AHL20(2)   ------- ----->ARR11(3)        <---------ANAC58          <-----------------AGL1----------->TBP--------->ICU4   atcttatagatttgagtttctgtttccgtttctatgtgctcttcttgttttctccataaaggaaaataaagatataaaaatctttattattattacaaaa  15715300                       <---------ARR11(3)                       --------->AHL20(2)                       --------->AHL20(1)                       <---------AHL20(1)                       <---------AHL20(2)       ------->GAMYB         ------->TEIL                       --------->ARR11(3)--------->ANAC58         ------->TEIL                      --------->AHL20(2) --------->ANAC46 <---------ANAC58                ----------->GT1          --------->ANAC58 --------->TOE2(3)              <---------ARR11(3)              <------------CBF         ------>ZmHOX2a(1)  <---------ANAC58               --------->ARR11(3) --->DOF2--------->CCA1(2)            --------->TOE2(3)------>ZmHOX2a(1)              --------->AHL20(2)   gagagaacaagataagaattgaaaatatattagctcttatcctaagccaactcactccttccttgatgtatgcatttttgttttgccataaaatcttata  15715400                                                                 ---------->DOF2                                                             >>>>>>>>>>E2Fc                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       >>>>>>>>>>E2Fe                ------>ZmHOX2a(2)                            >>>>>>>>>>E2Fd               <------ZmHOX2a(2)                  --------->AHL20(1)    ----------->GT1              <---------ARR11(3)            --------->YAB1   >>>>>>>>>>E2Fa                        --              --------->ARR11(3)            ----------->GT1 --------->LBD16                      xxxx      --------->LBD16                   --------->AHL20(2) <---------LBD16                     <-----     <---------ANAC58             ----------->GT1 <---------AHL20(1)  <---------------------WRI1<xxxx     <---------ANAC46           --------->At4g35610        <---------ANAC46                  xxxxxxxx     <---------ANAC58           <---------At4g35610  <---------AHL20(2)----------->GT1--------->YAB1     <---------LBD16          <-----------RAV1(2)--------->ICU4 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------LBD16    ------>NtERF2    <---------AHL20(2)<---------LBD16           --------->AHL20(2)   cccatttgcgggatgggatctatgaggcccattcaggtgtaaaaaattgtaatattttttagcgggaaaaagaacgataaatacaaaataatagatagcg  15715500                                       --------->AHL20(2)                                       <---------ICU4 <----------ID1                        --------->ATHB51 -------->DOF2         <-----------GT1 <---------AHL20(2)                               --------->ARR11(3) xxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------->AHL20(2)        <---------WOX13(1)    <-------TEIL -----ID1       <---------YAB1        <---------AHL20(2)      <---------ICU4         <-----------GT1 xxxxxxxxxxxxxxxxxxsmallRNA(l2)       <---------AHL20(1)      --------->ATHB12----------->GT1 xxxxxxxxxxxxxxx>smallRNA(i2)  <-----------GT1               <---------YAB1 ---------->DOF2         <   ataaagacaaatggtggtatcattttttctgtattactaaattatttcggtgtttttttgtttatgattgctaaacatgaaagttatatacatcttgtag  15715600  Previous    Next  AGI:  At3g43850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G21940.1); similar to unknown [Populus trichocarpa] (GB:ABK93792.1) Range:  from: 15713072    to: 15715139    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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