Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------At4g35610                                                   <-----------RAV1(2)                                                  <---------ZAT2                                                  --------->ZAT2                                                  --------->ZAT14                   <---------HSFB2a(1)                                        <---------MYB46(3)                         --------->ARR11(3)                                        --------->MYB55(2) --------->ALFIN1        <---------ARR11(3)                                       <---------AtMYB61 <---------ANAC46         --------->GLK1(1)                                       --------->ALFIN1 <------ZmHOX2a(1)     --------->At5g28300                                   --------->ZAT14<---------At4g35610        --------------------->WRI1                          ----------->GT1         --------->At4g35610    ----------->HVH21  --------->At4g35610     <---------ANAC46 --------->WRKY12<---------ZAT6--------->ZAT18  <---------At4g35610  <---------bZIP60(1) ----------->HVH21           --------->At4g35610 ------>ARR14(2)       --------->bZIP60(1)<---------WOX13(1)           <---------At4g35610  <-------- ------AtMYB77   ------>ZmHOX2a(1) <---------ZAT14<---------ZAT14     <---------ARR11(3)    <--------   tctctgctgttcccaagtccttctgatgtcgtaatattgcagtggttgacgctgcagaggagtgtaagacaagagctcacagtgaaatcttcgacttttt  15528100                                                 ------>ZmHOX2a(1)                           --------                                              ------>ZmHOX2a(1)                       --------->TOE2(3)                                          --------->ARR14(2)                          <--------------                                       <---------ALFIN1                               ---------------                                       --------->AtMYB61                              --------->TOE1(3)                                   --------->MYB46(3)                                 --------->YAB1                                  --------->ANAC58                                   ----------------                                  --------->ANAC58                                   ----------------         ------>ZmHOX2a(2)        --------->ANAC46                   --------->AHL20(2)  ---------->DOF2 -DAG2<------ZmHOX2a(1)     ===============================RAV --------->YAB1  ---------->DOF2 --DOF2--------->ARR14(2)   ----------->RAV1(1)----------->RAV1(2)   --------->YAB1  ----------------   gtaagacaggatcgaacttggagagaagaacaacacaagcaccacatcctcctgaaccaaaacaaacacaataatatcagacaaagaaccataaagagta  15528200                                     --------->At4g35610                                     --------->ZAT2                                     <---------ZAT2                                     ----------->RAV1(2)                                     <---------At4g35610                                 --------->ANAC46                                 --------->DEAR3(1)      <------ZmHOX2a(1)         --------->ANAC46      ----------->GT1         <---------ALFIN1     ----------->GT1        <-----------HVH21 --->GT1               --------->MYB46(3) -AGL15                <---------ATHB12 >AGL15              --------->WOX13(1) ->AGL2           --------->ANAC58 <-----------RAV1(2)               --------->MYB52(1)    <---------MYB46(3) ->AGL1           --------->ANAC58--------->LBD16                <---------YAB1       ---------->DOF2 ->AGL3         ---------->DOF2<---------At5g28300      ---------->DOF2            ----------->RAV1(1)   agaagaaaggataaaaaacaaagcaatcaccttcaccgcagctgagcttgacactcttgaaagaagtctgataacgaagaaactccaacaaagttgttga  15528300              <---------At4g35610              --------->At4g35610  --------------->AGL15          <------ZmHOX2a(1)        <---------------AGL15      ------->GAMYB               <-----------------AGL1    --------->At4g35610           <-----------------AGL2     <---------ARR11(3)    <---------At4g35610          ---------->ID1       <---------ZAT2   ----------->RAV1(1)      --------->TOE2(3)        ------>MYB83  <---------WRKY38(1)      <---------HSFB2a(1)       ------>MYB46(1)    ---------->ID1  <---------WRKY12         --------->HSFB2a(1)   >>>>>>>>>MYB2      <----------DOF2 --------->WRKY18(1)      ------->TEIL      <---------ANAC46<---------ICU4  <----------DOF2   agggtcaacagaggagagctcaagctcgaacctttgtccattaatggcgaaaaccaagctcattatctctctttttctctttctctctatctgtgtctgt  15528400                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   --------->ARR14(2)              --------->LBD16                      --------->AGP1             --------->ANAC46                      <---------ARR14(2)          <---------ARR14(2)                       <---------ARR14(3)          ------->TEIL                             --------->ARR14(3)          --------->ARR14(2)        ---------->DOF2<---------ARR11(3)       <---------ANAC55(2)  <---------ZAT18        --------->ARR11(3)       <---------ANAC58<---------ANAC58 --------->ARR11(3)                            ---------->DOF2       --------->ANAC55(2)  --------->ETT(2)     ----------->ARR10                --------->ZAT6<----       <---------ANAC58<---------ANAC58 <---------ARR11(3)                  <----------DOF2   *TSS   aagagtgtaacgtatccgaaatattccttgtccacatagaaagacctcgatgagatcttgaagccagagtgaatatcgctttcaccactaaatcgggact  15528500                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                         --------->CCA1(2)                                                        --------->ARR14(3)                                                        <-----------ARR10                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                      <-----------------AGL2                                      <-----------------AGL3                                    ------>NtERF2       <---------ARR11(3)     --------->YAB1                               <---------ZAT14          --------->AGP1        <---------YAB1                               --------->ZAT14          <---------AGP1        <---------AHL20(2)                          <---------ZAT18               --------->ARR11(3)   <---------AHL20(1)                          <---------ZAT14               <---------ARR14(3)   <---------AHL20(2)                          --------->ZAT18              --------->RVE1(1)     --------->AHL20(1)                          --------->ZAT14             ----------->ARR10      --------->AHL20(2)                        <---------ZAT18<---------------AGL15            <---------AHL20(1)                        --------->ZAT14--------------->AGL15            --------->AHL20(1)  <---------ANAC58    --------------->AtSPL8        ---------->DOF2     --------->AHL20(2)  <---------ANAC58    <---------------AtSPL8  ----------->GT1        --------->AHL20(2) ------DOF2          <---------ANAC46 <-----------------AGL1   ----------->RAV1(1)<-----------GT1  --   tttgacttgttaactaatacattttgtgtacacttctctgcctctaaatggtaaaaaagatctgcccacaaaaatataatataataacatgtctagttgc  15528600                                                           -------->ATHB1                                                           <--------HAHB4               <---------AHL20(1)                                                           --------->ATHB51             <---------AHL20(2)                                                           --------->ATHB12             --------->ARR11(3)                                                           <---------AHL20(2)        --------->AHL20(2)                                                    --------->At4g35610              --------->YAB1                                             ---------->DOF2                        <---------ATHB12                                             --------->YAB1--------->AHL20(2)   --------->LBD16                                             <---------ICU4<---------ICU4    ------->TEIL--------->CCA1(2)                        <---------ZAT6      <---------ATHB12     <---------ANAC46   <---------ATHB51             <---------YAB1             <------ZmHOX2a(2) <---------ATHB12   --------->SPL7            --------->AHL20(2)        <------ZmHOX2a(1)   --------->ICU4   <---------ZAT14            <---------AHL20(2)    ---------->DOF2   <---------At4g35610  <---------------AtSPL3           --------->YAB1       <------ZmHOX2a(1)   <---------ZAT2       --------------->AtSPL8 -------->DOF2--------->YAB1    ===============HOX2a_HOX2a<---------ATHB51 --------->ZAT14   aaaaagaagactattttaataagagagtgatagaggaaaaggatcaataaagacagctcaattatttgtgtgaaaactgtaccgcaataatatatggaag  15528700                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              <------                              --------->ANAC46                                                -------                     --------->ANAC46                        <------ZmHOX2a(1)              <------ZmHOX2a(1)                   <-----------GT1                         <---------TOE2(3)              <---------TOE2(3)               --------->AHL20(2)               --------->YAB1             <---------ARR11(3)--------         --------->ZAT6  ------->GAMYB         <---------AHL20(2)          --------->ARR11(3)<-------   tgaaacatataacacaaaaatatacaacacacacataagagtatatcatataatgacttctaaggaataagagagaagatgttagagtcatgaaggatat  15528800                                                                          ----------->HVH21                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                        --------->ANAC55(2)                                                                        --------->TGA1a                                                                        <---------ZAT2                                                                        =============================                                                                        <---------At4g35610        <---------TOE2(3)                                               =============================      ---------->DOF2                                                   --------->At4g35610   --------->YAB1                                                       --------->ZAT2 --->ARR14(2)                                                           <---------TGA1a ----ARR14(2)                                                         <-----------RAV1(2)      <----- --->ARR11(3)                  ---------->DOF2                      ------>ZmHOX2a(2)       <-------- ----ARR11(3)                --------->HSFB2a(2)                  --------->ARR11(3)   --------->ZAT2 ---GLK1(1)                  <-----------RAV1(2)             <---------AtMYB61         <---------ZAT2 -->GLK1(1)                  <---------HSFB2a(2)       <---------TOE2(2)<---------O2   --------->At4g35610 ->ARR11(3)         <---------TOE1(3)                  <---------TOE1(2)--------->O2   <---------At4g35610 --ARR11(3)         <---------TOE2(3)              <-----------GT1<---------ARR11(3)  ------->TEIL  <   ctgaataataaaggttgaagttgaggtagtcccagaagcgagagagcccatatttcccatgttttggtgatctcaggtgacacttatgcagctcctttaa  15528900                                                                                  --------->O2  <----                                                                                  --------->ANAC58                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC55(1)                                                                   --------->MYB52(1)       <--------                                                                  ------->GAMYB   --------->ANAC46                                                                 <---------MYB52(2)         ---------                                                       --------->At4g35610        --------->ANAC58                        <---------ICU4        <---------YAB1     --------->MYB46(3)        <------ZmHOX2a(1) ==bZIP_DOF             --------->YAB1      --------->YAB1     ----------->RAV1(1)----------->GT1   < ==bZIP_DOF   --------->At4g35610          --------->ICU4   --------->ANAC46    <---------ALFIN1----- ------GT1    <---------At4g35610          <---------YAB1   --------->ANAC58   --------->DEAR3(1)  -- --DOF2   --------->GLK1(2)  ----------->RAV1(2)       <---------At4g35610    --------->ANAC58  <---- ----------DOF2   --------->REM1(1)   --------->ANAC55(2)   --------->ANAC58  --------->ANAC58 ------   ctctttgtcaaaattctgcttcaccatcatcacctgttttatgtgattataaaacttagctctcgcaacaaactgaaaacacccacgtaaaaaggatttg  15529000  Previous    Next  AGI:  At3g43600.1    Description:  AAO2 (ALDEHYDE OXIDASE 2). Identical to Aldehyde oxidase 2 (AAO2) [Arabidopsis Thaliana] (GB:Q7G192;GB:O49156;GB:O64418); similar to AAO3 (ABSCISIC ALDEHYDE OXIDASE 3) [Arabidopsis thaliana] (TAIR:AT2G27150.2); similar to AAO1 (ALDEHYDE OXIDASE 1) [Arabidopsis thaliana] (TAIR:AT5G20960.1); similar to AAO1 (ALDEHYDE OXIDASE 1) [Arabidopsis thaliana] (TAIR:AT5G20960.2); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93768.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93767.1); similar to aldehyde oxidase 3 [Pisum sativum] (GB:ABS32110.1); contains InterPro domain 2Fe-2S ferredoxin, iron-sulphur Range:  from: 15523595    to: 15528494    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g43610.1    Description:  tubulin binding. similar to SPC98 (SPINDLE POLE BODY COMPONENT 98) [Arabidopsis thaliana] (TAIR:AT5G06680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71645.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) Range:  from: 15528668    to: 15535075    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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