Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <------MYB46(1)                                                                                  <------MYB83                                                                                <---------ANAC46                                                                               <-------GAMYB                                                                              --------->MYB111(2)                                                                              --------->MYB55(2)                                                                              --------->MYB111(1)                                                                              <---------MYB46(3)                                                                             <--------P                                      --------->TOE2(3)                   <---------TOE1(3)                                      --------->ANAC46                    <---------YAB1                             --------->YAB1                               <---------TOE2(3)               ------>ZmHOX2a(1) --------->ZAT14                  <---------HSFB2a(2)          ------    <---------ALFIN1     <---------AHL20(2) --------->YAB1        --------->HSFB2a(2)  ----------->GT1   acgctctcacctctctcctcttctcattttatcagaacaccctcaatcttcaattcaatctagggtttctagatttatggttgttggtaagggaaaatca  15491500                                 <---------ANAC58                                 <---------ANAC58                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                             ----------->HVH21                                                   <---                            <---------MYB52(1)                                                 <-----                         <---------LBD16                   --------->CCA1(2)                   <-----                    ----------------------->TaNAC69(2)    <---------ARR14(2)                   ------                  --------->HSFB2a(1)                     --------->ARR11(3)              <---------MYB46(3)                 <-----------ARR10--------->LBD16         <---------ARR11(3)              <------MYB83                 <---------ARR14(2)                       --------->ARR14(2)              <------MYB46(1)                 --------->ARR14(2)                     --------->LBD16                  <---------AtMYB61      <---------WRKY12 <---------SPL7                 ----------------->AGL3          <-----------RAV1(1)     --------->WRKY18(1)------>ZmHOX2a(1)     --------->At5g28300       --------->ZAT18 <---------MYB52(1) --->AHL20(2)<------NtERF2 --------->LBD16   ----------->GT1      <-------TEIL        <---------MYB46(3)   aatagaggtcaaggtcgcgaatcgtcctccggtgtccgtgtcttccatggtaaaaatccagatataggttcgagtggattatcaagagctgttggtttcg  15491600                                                                                           ----------                            <---------ALFIN1                              --------->HSFB2a(1)                       <---------At4g35610                                --------->HSFC1(2)                       --------->At4g35610                                <---------HSFB2a(1)          <---------HSFB2a(2)                                             <---------HSFC1(2)<-------- ------MYB52(1)        --------->ZAT2                      ------>ZmHOX2a(2)   <---------CCA1(2) ----ANAC58     <---------HSFB2a(2)             --------->ARR14(2)   --------->HSFB2a(2) ---------->ID1 ----ANAC58     --------->HSFB2a(2)             <---------ARR14(2)   <---------HSFB2a(2)<-----------GT1 ----->GT1--------->HSFB2a(2)                  <---------CCA1(2)    <---------LBD16<----------DOF2   ttactagcccttccaggtcgagaacagcttccacttctgtttgaaaaccatatccatgggatcgagactctctggaaatttctatctttttctcctttta  15491700                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                        --------->At4g35610                                                        <-                        <---------At4g35610                                                        --                    <---------WOX13(1)             <---------WRKY18(1)                             <-                  <---------MYB46(3)               <-----------GT1                                <-- ----->AGL15      --------->ATHB12      <---------ANAC46                                       <----- --DOF2          <---------YAB1         <---------YAB1                                       <-------   tagatttcattttgcattggtgattgagctcagaaaccagttgtgtttgtgtttgaccatttgttttgagagtgtttttagttaagttgctaattctttg  15491800       --------->ARR14(2)       <---------ARR14(2)    <---------ANAC46 ---------ANAC46 ---------ANAC58 ---------ANAC58 -------GAMYB ------->MYB52(2) -----MYB83                                                       --------->GLK1(1) --------MYB46(3)                                                 <---------bZIP60(1) ------->MYB55(2)                                              <---------YAB1 -----MYB46(1)                                               --------->YAB1 -------AtMYB61                                    <---------AtLEC2                         <-------- ------RAV1(1)     <----------DOF2           <---------YAB1<------------CBF               xxxxxxxxxxx ---DOF2     ---------->DOF2       --------->TOE1(2)<------------CBF                  <----------DOF2   ttggttgcatatactaaaagtctttgtagtttgtatacttacgagttatttttgcattgtctattgtgatatcaacttaatagtttgtcttttgttacag  15491900                                    --------->HSFB2a(2)                                    <---------HSFB2a(2)     --------->LBD16               <---------ANAC58    ------->GAMYB <---------At4g35610    <---------HSFB2a(1)    --------->ANAC46               <---------ANAC46   <---------LBD16<---------ZAT2   <---------ANAC58                                      --------->AtMYB61 <-----------GT1  --------->At4g35610    --------->HSFB2a(1)                          --------->REM1(1) ---GT1 *TSS   <--------P     --------->ATHB12           <---------YAB1             xxxxxxxxxxxxxxxxx xxxxx>smallRNA(i)--------->ZAT2<---------WOX13(1) <------ZmHOX2a(1)             ----------->GT1   gtttaaccggcacaagggtaagctgtctagagtgattgctggaacatttcggaggaagtttgataggccttacttcagttagaaggttacaccaatacac  15492000                                                                                        <---------MYB46(2)                           --------->At5g28300                             <----------DOF2                 <------ZmHOX2a(1)                                       <---------YAB1 <---------MYB111(1)                --------->LBD16 --------->ARR11(3)                      --------->GLK1(2)              <-----------RAV1(2)<---------YAB1                         <---------ARR11(3)-------->P              <---------LBD16   <---------ARR11(3)                      --------->ARR11(3)------>MYB46(1)        <---------ARR11(3)--------->LBD16             <---------MYB52(1)<-----------ARR10 ------>MYB83        --------->ARR11(3)----------->GT1   <----------DOF2        ---------->DOF2      <---------MYB59 xxxxxx>smallRNA(si3)   <---------LBD16 <-----------GT1           <---------AHL20(2)  -------->P   attcaagagagatacttcaggaaatttgcggtaatatcatatatacctttcattctgttattgtatatataaagtatctttgctaacttacctacttgtt  15492100                     <------MYB46(1)                    --------->ALFIN1              --------->ARR14(2)                    <---------AtMYB61             <---------ARR14(2)            --------->ATHB51              ---------->DOF2                                         ---            --------->ATHB12              <---------DOF5.7(2)                                  ------           <---------YAB1          <---------At4g35610                                         <-----         --------->YAB1            --------->ZAT2 <---------GLK1(2)                         <--------  --------->At4g35610<---------MYB46(3) --------->DOF5.7(2)                   ---------->DOF2  ------  <---------At4g35610<------MYB83  <---------ZAT2<------ZmHOX2a(1)  ---------->DOF2       --------->WOX13(1)   ttgtagcagaagtataattgggatggtgggattactgagctcgttaaagaaggattcttggttatagccaagaagcggatgaaagggattgtcaatcaag  15492200                              <---------HSFB2a(2)                          --------->ARR14(2) ------->DOF2             <---------ARR14(2) --->ANAC58       --------->AtMYB61 ----TOE2(3)      ------->GAMYB                         <---------PCF2 -ATHB12         <---------MYB55(2)                  --------->ALFIN1 --->ANAC58      --------->MYB46(3)                --------->ALFIN1   gaaagaagagtggtatacaaccaccatggattcgagataaactttgggctcggatgtgggagcattggaacactgaagatgctattgacaagagtgagaa  15492300                                       <---------ZAT14                                       --------->ZAT14                                       --------->ZAT18        <---------GLK1(1)                                       <---------ZAT18        --------->GLK1(1)                                    <---------ANAC46      --------->ETT(1)                                    <---------ANAC58 <---------ANAC58                                    <---------ANAC58 <---------ANAC58                             --------->ARR11(3)     <---------At4g35610                             <---------ARR11(3)     <---------ZAT2                         --------->At5g28300   --------------->AGL15     <---------ARR14(3)    ------->TEIL                        --------->CCA1(2)   <---------------AGL15   <---------AtMYB61    <---------REM1(1)             <-------TEIL-----------   tgcttcacaatttagaaactctactcgtggaggtcttggagtgcacaaacatgtagctggtcggaaatcgtttatgcaagttcattaagagatggtaaaa  15492400  Previous    Next  AGI:  At3g43571.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 2.5e-57 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 15491908    to: 15493326    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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