Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                           --------->GLK1(1)                                                                                           --------->CCA1(2)                                                                                          <---------ARR14(2)                                                                                          <---------ARR11(3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 --------->DAG2                                            <---------GLK1(2)     <---       --------->WOX13(1)                                                 --------->YAB1  --------->ARR14(2)     <---------ATHB12  <------ZmHOX2a(1)              <----------DOF2     <--------ATHB1  --------->ARR11(3) ------>GT1     --------->MYB52(1)              <---------MYB52(1)       <---------ATHB12 --------->ARR11(1) -->DOF2        ---------->DOF2        --------->GLK1(2)                 --------->ICU4 ----------->ARR10   gaaacaaatcattcaacataaaggaggagaacgttgtagagtttctatccgtttggctttaataggggagcgtcaatgattctggctgaagagatatgca  15411300     <---------TOE1(3)     <---------TOE2(3) <----------DOF2 ----->ZmHOX2a(2)             --------->TOE2(3) --------RVE1(1)           --------->ARR11(3) -----ZmHOX2a(2)           <---------ARR11(3)          <---------AHL20(2) -------ARR11(3)          --------->GLK1(1)           --------->AHL20(2)     <---------At4g35610 ------>ARR11(3)          <---------GLK1(1)     ------>ZmHOX2a(2)            --------->At4g35610 -------ARR14(3)          --------->RVE1(1)    <------ZmHOX2a(2)          <------MYB46(1) -------ARR14(2)         --------->ARR11(3)   --------->ARR11(3)          <------MYB83 ------>ARR14(2)         <---------ARR11(3)   <---------ARR14(2)         <---------MYB46(3) ------>AGP1         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               <---------AtMYB61 ------>ARR14(3)  ------>NtERF2               --------->GLK1(2)       --------->ATHB12             -- -------AGP1     --------->ANAC58             --------->ARR14(2) --------->GLK1(2)            <------ ------CCA1(2)   --------->ANAC58            <------ZmHOX2a(1)  <---------GLK1(2) ---------->DOF2 <--   gatctttaaggcttaatggacgcctaagatatccttgaatagatggaggatccagattaaatagaagaatctcgattggtgctgaaaaggaagtagcttt  15411400                                <---------ALFIN1                <---------At4g35610                         <---------DEAR3(2)           <---------ANAC58                         <---------MYB46(3)           <---------ANAC58                         <------MYB83                 <---------ANAC46     --------->DAG2      <------MYB46(1)             ---------->ID1   ---------->DOF2   <---------MYB46(3)          <---------ANAC46                  <---------ZAT6 ------->ETT(1)   <----------DOF2                <---------ANAC58           <---------ANAC46 -------- ----DOF2   <----------DOF2xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---------------AGL1 <-----------RAV1(1)         <---------ANAC58    ------>ZmHOX2a(1)   <---------YAB1   gtcggaaaaggcaactttctcttttgttggttccacacataaaaacagcttgtgtgtcgttttggcaactcctaaacagcttgtagtcttcatgagagtg  15411500                                     --------->MYB52(2)                                    <-------TEIL                        <---------LBD16                                 <------MYB83                           <------NtERF2              <---------ARR14(2) <------MYB46(1)                      <-----------RAV1(2)              --------->ARR14(2) <---------MYB46(3)                   <---------WRKY12              --------->ARR11(3) --------->MYB55(2)                   ---------->CDC5              <---------ARR11(3)<---------AtMYB61           --------->At4g35610             --------->GLK1(1)  --------->ALFIN1            <---------ZAT2             <---------GLK1(1) <---------MYB52(1)           <---------At4g35610           <------ZmHOX2a(1)  <---------ANAC46          <-----------HVH21       <----------DOF2------          --------->ANAC58    <-------GAMYB xxxxxxxxxxxxxxxx>smallRNA(s)<---------At4g35610    <-----       --------->At4g35610   --------->MYB55(2)      --------->At4g35610--------->At4g35610 ------>ZmHOX2a(1) --->GT1  --------->ANAC58   <---------MYB46(3)<------ZmHOX2a(1)    <-----------HVH21---------->DOF2   aatataaacagcaggaaatcttcaaaatagtcgggtggttcgtcgagtaggaatgggctgtcagctagttcgtcagcgggttctttagaaagtccttcaa  15411600             <---------ARR11(3)             --------->ARR11(3)                                                 --------->ZAT2           --------->HSFC1(2)                                                   <---------At4g35610           <---------HSFC1(2)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           --------->HSFB2a(1)                --------->ALFIN1      <---------ZAT2           <---------HSFB2a(1)                <---------AtMYB61     --------->ZAT2         ---------->DOF2                  <-----------RAV1(2)       --------->At4g35610    --------->LBD16               xxxxxxxxxxxxxxxx>smallRNA(s)      <---------At4g35610   <---------ANAC58              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          --------->At4g35610   <---------ANAC58       <-------TEIL  <-----------HVH21       <-----------HVH21   <---------ANAC55(2) <---------DEAR3(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------ZAT2 --->HSFB2a(2)       xxxxxxxxxxxxxxxx>smallRNA(i)   <-----------HVH21       <-----------HVH21 ----HSFB2a(2)      <---------At4g35610--------->WOX13(1)      --------->WOX13(1)   gaagtccgtgagaaagttcttcagccggttcatcagcaagtctatcaggtggtctgtcagtgagtccatcagctgcaatgtcagctctcattcttatatc  15411700                                ---------->DOF2     <---------WOX13(1)   <------MYB46(1)                                 --------->ICU4   --------->ATHB12       <------MYB83                                    <---------YAB1   <---------ICU4        <---------MYB46(3)                             <---------bZIP60(1)  <---------YAB1        --------->ALFIN1                     <------------CBF             <---------YAB1  --------->ICU4   ----------->RAV1(1)                --------->ALFIN1  --------->bZIP60(1)      <--- xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              --------->ARR11(3)----------->HVH21 --------->ICU4   agacatgattgctattaagtacaacagtgggtctaaaagagttgtatgtttaagatgtggagacattggtcatgacatgattttgtgcaagtatgagtag  15411800              ----------->GT1             <---------TOE2(3)        --------->CCA1(2)       --------->ARR14(2)       <---------ARR14(2)       --------->ARR11(3)       <---------ARR11(3)                            --------->ATHB12                --------->WRKY45      <---------HSFB2a(1)                       <---------ANAC58                   <----------DOF2     ----------->ARR10               <---------At5g28300   <----------DOF2      <---------AHL20(2)   <------ZmHOX2a(1)           ------>ZmHOX2a(1)<---------ANAC58                <-----------GT1  ---- <---------TOE2(3)  <----------DOF2 <-----------GT1 <---------YAB1         <---------MYB52(1)   <---- ------ZAT6  <---------TOE1(3)--------->TOE2(3) <---------ANAC46   <-----------GT1 --------------->AGL15   tctaaggaagatttgaaggtaacttttgttttcctaaattacagtattttgcttatgatttctttcttataacttctgttatttactttgactagaatat  15411900                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                     --------->ARR11(3)                                                                     ------->TEIL       <---------ARR11(3)                                       <---------ANAC46       --------->ARR14(2)                       <---------ATHB12<---------ANAC58      <---------CCA1(2)                         <---------YAB1  <---------ANAC58        <---------WRKY12 -------->CBF      <----------DOF2  --------->ALFIN1------------>CBF<---------CCA1(2)   <---------WRKY38(1) -------GT1   ---------->DOF2     <---------bZIP60(2)    <-----------HVH21              <---------WRKY45   acaatgctatatctgtaaaagctttggccatctatgatgtgtcgaacccgatgattcaatgtcatgggttgtatcttgctacaaatgtggtcaactaggt  15412000               <---------REM1(1)            --------->MYB52(2)                                                                   ----        --------->ANAC58                            <---------WOX13(1)                          <----        --------->ANAC58                          --------->ATHB12                              <----   <---------ZAT18                               <---------YAB1                                 -----   --------->ZAT14                         <---------ALFIN1                      <---------DAG2xxxxxx   <---------ZAT14                    <-----------GT1                            <----------DOF2-----   catactggactcgtaagttgtagagagtttagtttcgaattatccacactgttgattgagttgtccctaaacagagttgatcactttctctctaggcatg  15412100                              <---------CCA1(1)                              <---------RVE1(1)                   ----------->RAV1(1)                  <----------ID1                --------->ANAC58                --------->ANAC46            <---------ICU4 ----->ALFIN1   --------->ANAC58            --------->YAB1                                          - ---MYC2      ---------->DOF2--------->ARR11(3)                                       --------->ZAT18 ---MYC3    <---------YAB1   <---------ARR11(3)                                       <---------ZAT18 -->MYC3  --------->YAB1    --------->YAB1 <---------ATHB12                         <xxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxx>smallRNA(si3)  <-----------GT1         --------->MYB52(1)   --------->ANAC46     - -->MYC2 <---------YAB1  --------->YAB1  --------->WOX13(1)                ---------->DOF2        <--   tggtagacactatgatgaaagcaacaaaaatgatattttcagtccatcatggtttaagtctaagggagaagggcattttaagcgcgactgccctaattct  15412200  Previous    Next  AGI:  At3g43500.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G42080.1) Range:  from: 15411245    to: 15411706    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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