Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ATHB12                                                                                        -------->HAHB4                                                                                       --------->ICU4 -------->ARR11(3)                                                                     <---------YAB1 ---------GLK1(2)    ------>MYB46(1)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ---------ARR11(3)   ------>MYB83                        <----------DOF2          --------->YAB1 ---DOF2  --------->TOE2(3)                      <---------ANAC58          ------>ZmHOX2a(1) --DAG2   --------->TOE1(3)                      <---------ANAC58         --------->TOE2(3) -GT1     <----------DOF2             <----------DOF2 <-----------GT1  --------->ARR14(2)   tagattttcaaactttaaaaaccaaatcgtttctctatttcttttttttttgcttatttctttctaatttttggttcctcaatatcaaaatgattcaatg  15378200                                                                              <---------YAB1                                                                            --------->AHL20(2)                                                                            <---------AHL20(2)                                                                           <---------AHL20(2)                                                                           --------->AHL20(1)                                      --------->YAB1                       <---------AHL20(1)                                      --------->AHL20(2)                   --------->AHL20(2)                                      <---------AHL20(2)               --------->AHL20(2)                                     <---------YAB1            <---------ARR11(3)                                   <--------HAHB4              --------->ARR11(3)                   <                                   <---------ICU4             <---------CCA1(2)                     <                                  --------->ICU4             <---------AHL20(2)                    <-                                <---------ICU4               --------->AHL20(1)                   <--                               <---------YAB1                <---------AHL20(1)                 -----                             --------->YAB1                  --------->ARR11(3)              --------                    <---------YAB1<---------YAB1             <---------ARR11(3)              <-------             --------->ANAC55(2)--------->YAB1        <---------ZAT6   <---------AHL20(2)  --------->DOF5.7(2)           <-----------GT1 <-----------GT1        <----------DOF2     --------->AHL20(2) <---------YAB1   ttcttcgactaatttacatattttgattttttcatcataattatatagttagctttgtgttaatatatcttatttaatttattttagcaatacgataacg  15378300                          ---------->DOF2      ------->TEIL     --------->ANAC55(2)      --------------->AtSPL8     <---------AtLEC2  <---------ANAC55(2) ---------SPL7         <---------ANAC58                                    --------->AHL20(2) ------NtERF2          <---------ANAC58                                    <---------AHL20(2) --------DEAR3(2)      <---------ANAC46                               --------->AHL20(2) -------DEAR3(1)      <-----------------------TaNAC69(2)              <---------AHL20(2) -->GAMYB             <-------TEIL                                    <---------AHL20(1) ->MYB52(1)        <------ZmHOX2a(1) <---------TOE2(3)        <---------ZAT18  --------->AHL20(2) --DOF5.7(2)   ---------->DOF2----------->GT1                 --------->ZAT18  <---------AHL20(2)   gcggtatgcatgtactaaaaaggatgcgtaaagagtattaagtttttcacatcgaacaaaattgtccactattttatttttttaaatagttgtctatatt  15378400                                                                   <---------ICU4                                                                  --------->ICU4                                                               <-----------GT1                                                              <---------YAB1                                                            --------->ATHB51                         <--------HAHB4                     <--------HAHB4                        --------->ICU4                      <---------ICU4                    <---------ANAC55(2)                    <---------YAB1                       -----                    --------->ANAC55(2)                    --------->ICU4                  --------->AHL20(2)               <---------AHL20(2)                     --------->ANAC58             --------->MYB59              <---------AHL20(2)                      --------->ANAC58         --------->MYB111(1) --              --------->AHL20(2)           --------------->AGL15 --------->ANAC55(2)  --------->CCA1(2)         --------->YAB1 <---------YAB1     <---------------AGL15 <---------ANAC55(2) --------->ARR11(3)   acaagaacaaatgaaaataaataggtattattagataagtagtttttttttttggtaaggcattattacttattagataagtagttagatatataaaata  15378500                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                                      --------->HSFB2a(1)                                                                   <---------ICU4     <---------HSFB2a(1)                                                                  --------->ICU4     ------->TEIL                                                                  <---------YAB1    *TSS   <---------ANAC58                                                                --------->YAB1      --------->MYB52(1)                                                                <---------ICU4     ------->GAMYB         <---------TOE2(3)                                     --------->ICU4     --------->MYB46(3)         <---------TOE1(3)                                <---------WOX13(1)      <---------MYB52(2) ---->YAB1                                               <------------CBF       --------->MYB52(1) ------->AHL20(2)                        ---------->DOF2--------->ATHB12  --------->ANAC46<----------   atcaaatagttgaggtttttttggaatatttctgagaaaaacaaaaagaaaacaaaattgattgaataatgaatacaccgaataacgaacgttgcgtaga  15378600                                                                                                    -                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ===                                                                                                  ---                                                                                                 <---                                                                                                -----                                    <---------AHL20(2)                                         ------                                    <---------YAB1                           <-----------GT1   ------                   --------->MYB52(1)                                     <---------GLK1(1)    ------                 --------->YAB1   <---------CCA1(1)                       --------->GLK1(1)   -------                <---------ATHB12  <---------RVE1(1)               --------->MYB52(1)   <---------TOE1(2)              --------->WOX13(1) --------->ARR11(3)          <---------TOE2(3)        ------>ZmHOX2a(1) -------------TaNAC69(2)         <---------ARR11(3) <-------TEIL <---------WRKY12--------------------   gaagagaaccaattcccaatcaaacggagaagacagatattattcacagagaggctcatggctgaggtaaacggagatttccccgttcctagtttcgccg  15378700       <---------ARR14(2) <---------PCF5 ---------->HVH21           <---------ANAC58 -------TGA1a       --------->LBD16 ------>TGA1a      --------->DEAR3(1) -------O2         --------->RAP2.6(2) ==========================================MYC_MYB ------>O2        <---------LBD16                           <------MYB46(1) ---NtERF2       --------->LBD16                            <------MYB83 ->NtERF2        ------>NtERF2                             --------->MYB59 --->DEAR3(1)   --------->ANAC46                        --------->ZAT2 ----->HVH21 --------->ARR14(2)    <-------GAMYB        <---------ZAT2                           ---- --->At1g77200 <---------LBD16  <---------ANAC58       ------->TEIL                              <--- -->DEAR3(2) <---------ARR14(2) <---------ANAC58    --------->ANAC46 --------->ZAT6             ----- ->WRI1--------->ARR14(2)   <---------ANAC58<------ZmHOX2a(2)      ------->TEIL                ------   acgggaccggttctgtttccgccggacttgacttgctcgttgagagatcgattcacgaagctaggtatgtatcactagtaactggaatcaatttgaatcg  15378800                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                          <---------ANAC58                                                                              <---------ZAT14       <---------CCA1(2)                                                      <---------ZAT18    <---------YAB1                                                            --------->ZAT14 ----->DOF5.7(2)                                                              --------->ZAT18 ------MYB52(1)                                                     --------->MYB52(2) <------ZmHOX2a(1) ---->TOE2(3)          <----------DOF2                            <---------MYB52(1)   ============== ----->GT1   <----------DOF2                             <---------ANAC46 --------------->AtSPL8   ttaattctcatttctctttatctgtctttgtgtttgaagttttttcttagcctatagttctgtgatttgttagttcttagtacactataggagcgtgagc  15378900                                                                                                    <                                                                                                    -                         ----------->GT1                                                          <--               ------>ZmHOX2a(2)        <------ZmHOX2a(2)                                   ---------             <---------AGP1  <---------AHL20(2)                                          --------->ZAT18            <---------CCA1(2)--------->AHL20(2)                 <---------AHL20(2)       <-------TEIL =====================HOX2a_HOX2a     --------->At4g35610   ----------->GT1              --------->ETT(2)   aattgacgagacttggatctatatgaattgttaaattagcagatcaatttgggaaactcaagaggtttaatttcaaactcttgtttcaaggtccacagag  15379000                                                                            <------MYB83                                                                            <------MYB46(1)                             <---------AtMYB61                             <---------AtMYB61       --------->REM1(1) <---------YAB1                                    --------->MYB59 <---------GLK1(2)      --------->ARR11(3)                            --------->DAG2 ---------At4g35610     <---------ARR11(3)                          ---------->DOF2 -------->At4g35610    --------->YAB1  <---------REM1(1)       --------->ZAT14                     <- ---------RAV1(2)  <---------YAB1    <-------GAMYB             <---------ZAT14                 <----- >ANAC46  --------->ANAC46 <----------DOF2                    --------->AtLEC2          <----------DOF2   ccagatgcttcaactcaacttactattatctttggtgggagttgtagagtcttcaatggtgtccctgcacaaaaggtttggtccatctagctttgagtac  15379100  Previous    Next  AGI:  At3g43440.1    Description:  JAZ11/TIFY3A (JASMONATE-ZIM-DOMAIN PROTEIN 11). Identical to Protein TIFY 3A (TIFY3A) [Arabidopsis Thaliana] (GB:Q9M246); similar to JAZ12/TIFY3B (JASMONATE-ZIM-DOMAIN PROTEIN 12) [Arabidopsis thaliana] (TAIR:AT5G20900.1); similar to ZIM motif-containing protein [Triticum aestivum] (GB:ABK63978.1); similar to OSJNBa0060D06.16 [Oryza sativa (japonica cultivar-group)] (GB:CAE03550.1); similar to Os04g0653000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054103.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 15378584    to: 15381047    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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