Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->LBD16                                                                                      ------>NtERF2                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.6(2)                                                                                     --------->ANAC58                                                                                     --------->RRTF1(3)                                                                                     --------->RRTF1(2)                                                                                     --------->RAP2.3(2)                                                                                     --------->RAP2.3(3)                                                                                    --------->RAP2.3(1)                                                                                    --------->RRTF1(1)                                                                                   <---------ATERF1(1)                                                                                   --------->ABI4(1)                                                                            <---------ICU4                                                                         --------->YAB1 ----------->RAV1(1)                                            --------->SPL7              <---------YAB1<------NtERF2                                          <---------SPL7           --------->MYB55(2)--------->ANAC46                                         <---------ANAC58          <---------MYB46(3)--------->ANAC58                                         <---------ANAC58         --------->ALFIN1--------->DEAR3(1)                                    --------->MYB52(1)           <---------MYB52(1)------>NtERF2                                 --------->ANAC58             <---------ZAT14     --------->ANAC46---     --------->MYB52(1)          --------->ANAC58          --------->ANAC58 --------->YAB1    ------- ----------AGL15        ---------->DOF2------->GAMYB       --------->ANAC58<---------YAB1    <-------TEIL --------->AGL15  --------->ICU4 --------->ANAC46     <----------ID1<-------GAMYB--------->MYB46(3)   gtttgagtaacggttgagtaatcagtgaaagatggaagcaacggcgttcgacataggggacaagtacggtggttatcatcatcaccgccgcaacattcat  15365900                                                                                               <-----                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                           <---------ALFIN1                                                                                     ------>ZmHOX2a(1)                                                                                     <---------HSFB2a(2)                                                                                 ------>ZmHOX2a(2)                                  ------->MYC2                                  <---------GLK1(1)                                  <-------MYC2                                  <------ZmHOX2a(2)                                  ------->MYC3                                  --------->GLK1(1)                                  <-------MYC3                                 <---------AGP1--------                                 --------->O2                                  --------->ARR11(3)                                 --------->ANAC55(2)                           <---------ARR14(2)                                 <---------O2                       ------>ZmHOX2a(1)--------->HSFB2a(2)                     --------->YAB1     <---------ZAT14             ===================HOX2a_HOX2a            <---------WRKY38(1)  --------->ANAC46  --------->At4g35610         --------->ARR14(2)           --------->WRKY18(1)   <---------ANAC55(2)           <---------ANAC58<---------ARR14(3) <--      --------->MYB52(1)         --------->TGA1a   <---------At4g35610         --------->ARR14(3) --- ------>GLK1(2)     <---------ATHB12    --------->ZAT14        <---------ANAC58<---------ARR11(3) --- -->YAB1  <--------ZAP1          <---------TGA1a------>ZmHOX2a(1)   ====================HOX2a_HOX2a   aatctagccatcggtcaatacaatcacgatgaaacacgtgagtacagttcctaagctctctgatttcgtcctcgtcttcaagatctcctagacacacggc  15366000                                        <---------ANAC46                         ------>ZmHOX2a(2)                        --------->GLK1(1)         --------->ARR14(2)                        <------ZmHOX2a(2)         <---------REM1(2)                        <---------GLK1(1)        ------>NtERF2                       <---------ARR14(3)       <---------ZAT18                       <---------ARR14(2)     --------->At4g35610                       --------->ARR14(2)   --------->DAG2 <-------MYC3          <---------ARR11(3)  ---------->DOF2 ------->MYC3          --------->ARR11(3)--------->LBD16 ----ZAT18            --------->GLK1(1) <------NtERF2 ->ANAC55(1)      --------->LBD16     <---------ANAC46 ->O2<---------ANAC46 <---------GLK1(1)<---------LBD16 ->bZIP60(2)     <------NtERF2       <------NtERF2<---------ARR14(2) ->TGA1a         <---------ANAC46   <-----------HVH21         <----------DOF2 ->ANAC58       <---------LBD16    --------->O2 ----------->HVH21 ->ANAC58       --------->LBD16    --------->ANAC46  --------->ANAC58 ->ANAC46       <------NtERF2    --------->DEAR3(1)  --------->ANAC58     <---------ANAC46          = -------ALFIN1  ------>NtERF2   --------->ANAC46--------->ZAT18          <<<<<<<<<<MYB80            < ------>ANAC58 --------->DEAR3(1)<---------ALFIN1<-----------HVH21      <---------MYB46(3)          = ------>ANAC58<---------LBD16 <---------ALFIN1<---------At4g35610 <----------DOF2           <------ZmHOX2a(1)   acacatgtcgtttatcgccgcgggagatctctccaccgcgtcgcggaaagcggacacggctaggctttctttgatggtttgtgatgaaatagaaggagaa  15366100                                        --------->MYB52(1)                                        <---------DOF5.7(2)                                       <---------ARR14(2)                                       ----------->HVH21                              ========================HOX2a_HOX2a                              ------>ZmHOX2a(2)                             =========================HOX2a_HOX2a                            <---------ARR14(3)                            --------->ARR14(2)               <------ZmHOX2a(2)                            <---------ARR14(2)              --------->ARR14(2)                            --------->GLK1(2)               --------->ARR11(3)                            <---------AGP1                  <---------ARR11(3)                            --------->ARR11(3)       --------->ANAC58                           =============================HOX2a_HOX2a                           ==============================HOX2a_HOX2a                        =============HOX2a_HOX2a     --------->AtLEC2                        =================================HOX2a_HOX2a                        ================================HOX2a_HOX2a                 <---------YAB1       --------->At5g28300   <---------ARR14(2)               --------->YAB1<------ZmHOX2a(2)       --------->ANAC46              --------->ICU4<---------ARR11(3)       --------->ANAC58              <---------YAB1--------->ARR14(3)    ------>ZmHOX2a(2)                        <---------MYB52(1)           --------->ICU4  <------ZmHOX2a(1)      <-------TEIL<-------TEIL                <---------RAP2.6(3)         <---------At4g35610<-----------ARR10    <------ZmHOX2a(2)                       <---------ANAC58   <------ZmHOX2a(1)    <------ZmHOX2a(1)  ------->GAMYB---------->DOF2                  <---------ANAC58   ==================================HOX2a_HOX2a<---------ARR14(2) --------->TOE2(3)     <---------ANAC46   =================================HOX2a_HOX2a<------ZmHOX2a(1)  ----------->GT1 <---------YAB1 ===================================HOX2a_HOX2a=====================HOX2a_HOX2a<---------YAB1 ------ZmHOX2a(1)--------->ICU4       --------->DOF5.7(2)   --------->AGP1     --------->ICU4 ====================================HOX2a_HOX2a--------->ARR14(2)--------->YAB1--------->YAB1<------   gaggaggattgagatgatgatgatgaggaggatcttgagcggtaacggaggatccatgcaaagatccatcgtaaaacggtgatgataagtgccgttttgt  15366200            <---------YAB1            --------->ICU4        <---------ANAC46     --------->ALFIN1    <-------MYC3    <-------MYC2    ------->MYC2                                                          <------ZmHOX2a(1) <--------    ------->MYC3                             --------->ICU4       ---------->DOF2           *TSS ---ANAC46<---------At4g35610             <---------YAB1   <---------ANAC46              <------ZmHOX2a(1)   agagaacgtggctgatgatgagactagtgtcttcgatgaagaatgtcattgtgaaaacttggagtagagaaagagaggagaagaagagggaggactagaa  15366300                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                      <------------CBF           <---------AHL20(2)                                                     --------->ATHB12        --------->AHL20(2)     <                                              <------MYB46(1)                <---------AHL20(1)     -                                              <------MYB83               <---------AHL20(2)        <-                  ---------->DOF2            <---------AtMYB61       <----------DOF2            <----               <-----------TBP           <---------MYB46(3)         <---------ANAC46            <----         <---------ANAC58               <---------AtMYB61  <---------REM1(1) <---------AHL20(2)<-----         <---------ANAC58         --------->ALFIN1  <---------YAB1  <---------ANAC58    <-----------GT1 -HSFB2a(2)  <----------DOF2 ---------->DOF2 --------->MYB59        <---------ANAC58  <---------AHL20(2)   gttagagtcatgcgtctttataaagacaacttaaaggtggtgatggtttggtttttcattggtgtaagtggctttttattttatttattttaactatttt  15366400     <---------YAB1    <---------AHL20(1)                                                                 --------->ARR14(2)    <---------AHL20(2)                                                                 ------->TEIL  <---------YAB1               <---------YAB1                                          <---------ARR14(2) ---------ICU4           --------->AHL20(2)                                           <---------CCA1(2) -------->YAB1           <---------AHL20(2)                 <-----------HVH21 <---------ANAC58 --------YAB1           <---------AHL20(2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -----YAB1           --------->AHL20(2)                  <---------ANAC58     <---------ANAC58 -----AHL20(2)       <---------AHL20(2)   <-----------GT1<---------ANAC58   <---------YAB1        --- ----AHL20(2)---------->DOF2 <-----------GT1         <----------DOF2     <---------MYB52(1)       <--   tattattatttttgcaaaagtatttatttatttacaattgtttttttcattacaactttcggtgtcaaattttctgttatgcttatctgtatccacatat  15366500                  <---------YAB1         <---------AHL20(2)               --------->ICU4          <---------AHL20(2)            --------->AHL20(2)      <---------ARR11(3)            --------->AHL20(1)      --------->ARR11(3)            <---------AHL20(1)      <---------AHL20(1)       <-----------RAV1(1)       <---------AHL20(2)            <---------AHL20(2)    --------->ARR14(2)        <---------TOE2(3)         <---------AHL20(2)         --------->YAB1           <---------ARR14(2)   <---------MYB46(3)             --------->AHL20(2)        <---------AHL20(2)        <---------ARR11(3) <---------At4g35610              --------->AHL20(1)       --------->AHL20(2) <---------AtLEC2    <---------AHL20(2)              --------->WOX13(1) ------>AHL20(2)<---------ICU4   <------ZmHOX2a(1)   --------->At4g35610    <---------ATHB12 -------AHL20(2)--------->YAB1 <---------TOE2(3)     <---------ZAT2    --------->TOE2(3)   tttaatctatataataaattatgagtctgcattgaggatatatttttttttattcagctgttgatgttggaaaacttaatcagtcaaatttaatgtgcta  15366600                                                      --------->At4g35610                                                     --------->MYB52(2)                                                     --------->MYB46(2)                                                   <---------MYB52(1)                                                 --------->MYB111(1)                                                 --------->MYB46(2)                                                 --------->MYB52(2)                                               <---------MYB52(1)                     <---------YAB1           ------------>MYB.PH3(2)                          <-----       <---------AHL20(2)                    <---------ZAT6                       <---------TOE2(3)       --------->AHL20(2)             <---------AtLEC2<-------GAMYB ---------->DOF2 --------->ATHB12   ttaagctattttattcatacagtacaattgaaaattcaatgcatgaactgttagttagttgaaattgagtaaaaggagaagattaatgtttggatagagt  15366700                                             ------>ZmHOX2a(2)                                           --------->ARR11(3)        <---------TOE2(3)         <---------AHL20(2)                         ----------->GT1        -   --------->MYB52(2)            --------->AHL20(2)                         --------->DAG2        <-- <---------MYB52(1)        --------->YAB1<---------YAB1                    ---------->DOF2      <---- ----GLK1(1)     ------->TEIL    <---------AHL20(2)     <-----------GT1 --------->YAB1       <-------   tctgttagttaatgtaatgaaactttgtaacataattttatatatgatcgtggaatataaacccttgaacacatttataaagttaaatgttactcagagg  15366800  Previous    Next  AGI:  At3g43430.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G20885.1); similar to unknown [Populus trichocarpa] (GB:ABK93837.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 15365523    to: 15366292    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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