Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------>NtERF2                                              ----------->HVH21                                              --------->DEAR3(1)                               ------                                        <---------ANAC58    <---------At4g35610                ------   --------->HSFB2a(2)                  <---------ANAC46    <------NtERF2          <---------PCF2 --------ANAC58                         <---------ANAC58    --------->At4g35610   ------------------- --------ANAC58              <----------DOF2<---------ATERF1(1)            --------->MYB52(1)  ------ ------DOF2             --------->MYB52(1) --------->DEAR3(1)     <---------At4g35610      --------->ANAC58 ->LBD16                <---------At5g28300<---------DEAR3(1)     --------->At4g35610      --------->ANAC58 >LBD16                 -------->P<---------YAB1          <---------RAP2.6(2)   --------->ALFIN1   ttcttgtcgaacttggacactatagctaccgcttttgttatagcgtcgacgacggttttggccgcttcagcaaactctaacggtgggactctcaagcact  15236000                                                                                                   --                                                                                                   --          <---------ARR11(3)             <------NtERF2                                             <-          --------->ARR11(3)          <---------LBD16           ---------->DOF2                    <- --->ANAC58                         <---------RAP2.3(3)   --------->YAB1                          <-- --->ANAC58   --------->At4g35610   <---------DEAR3(1)   <---------YAB1              ------->TEIL <-- ---->TaNAC69(2)                 <-----------RAV1(1)  --------->GLK1(2)       <---------WOX13(1)  --- --->ANAC46<------ZmHOX2a(2)   <----------DOF2        --------->ICU4  <------ZmHOX2a(1)        ------   ccatttgaacaagatcagttgaagaaaacgcttctttgtgggcggaacataatgagattatgataagaaagaggaagaagattgatgaacccatttgtcg  15236100                                                                                         <----------DOF2                                                                                       <---------YAB1                                                                                      <---------ARR11(3) ------->HSFC1(2)                                                                     <---------AHL20(1) ------->HSFB2a(1)                    <---------ZAT6                                  --------->ARR11(3) --------HSFC1(2)               <---------TOE2(3)                                    --------->CCA1(1) --------HSFB2a(1)         --------->AtLEC2                                          --------->RVE1(1) ---------ARR10        --------->GLK1(2)                                           --------->YAB1 -------ARR14(2)       --------->ARR11(3)                                    --------->ANAC58 ------>ARR14(2)      <---------GLK1(2)                                      --------->ANAC58 --->ETT(1)    <-----------RAV1(2) --------->ALFIN1                        <---------ALFIN1   gaacttcgccatctatctcaggtagaatcttgcaaaggtagtggaagttgaagatgaaacaagagtgtctctctctcacactctataatatctttgtgaa  15236200                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                        <----------DOF2                                                                                       --------->TOE2(3)                                                                                   <---------MYB46(2)                                                                                   <---------MYB111(1)                              --------->YAB1                         --------->ANAC58-------->P                           <---------AHL20(2)                        ----------->GT1 ------>MYB46(1)                          <---------AHL20(2)                         --------->ANAC58------>MYB83                          --------->AHL20(2)                     --------->ANAC58  --------->AtMYB61                    ----------->GT1                              --------->ANAC58  <---------MYB111(2)             <---------bZIP60(2) ---------->DOF2       <---------ANAC58            <---------MYB59 <-             <---------ANAC46<---------YAB1            <---------ANAC58   ---------->DOF2   <--------   gagtgaatgtaagtgatgtgtgatgttatttattataaagagagagagagggtaatggctaggcagtaggcaagaaaaaagacgacctacctttgctttt  15236300                                                                                            <--------                                                                                            ---------                                                                                       <---------DEAR3(2)                                                                                     <---------LBD16 ---DOF2                                                                        <---------REM1(1) --- --DAG2    <---------YAB1      <-----------GT1        ----------->GT1  --------->DAG2<---------ANAC46 -ANAC58   <---------TOE2(3)<---------ICU4   --------->MYB52(2)       ---------->DOF2---------------- ----------GT1          <------ZmHOX2a(1)  <---------MYB52(1) --------->GLK1(2) <-----------RAV1(1)-- -ANAC58<---------MYB52(1) --------->ICU4<---------ZAT6    --------->ICU4      --------->ARR11(3) <--   tataccatcagttatggatgagattaggaatttttactaagtattgttagttcaattggtaaaaattctaggtaaagtttagatgttgccggttcgagta  15236400                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                            ------>NtERF2                                                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                           <xxxxxxxxxxxxxxxxsmallRNA(i)                                                          <---------RAP2.6(2)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                       <---------GLK1(1)                                                       --------->GLK1(1)                                                      --------->ARR14(2)                                                   <---------ANAC55(2)                                                   <---------ANAC46                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                 --------->MYB52(1)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                *TSS  <---------ARR14(2)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                            <---------AtMYB61xxxxxxxxxxxxxxxx>smallRNA(i)                          <---------ANAC46 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           <---------                    <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                <---------ARR11(3) -HSFB2a(2)       <---------YAB1  <---------ANAC46<---------LBD16                          --------->GLK1(2) >HSFB2a(2)      --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   --------->ARR11(3) ------>ICU4   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)<---------TOE2(3)                      --------->RVE1(1) ->AGL1   ------->TEIL <-----------RAV1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         --------->AHL20(2) ------->ATHB12<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(s)<---------AHL20(2)<-- -------YAB1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ANAC55(2)          --------->AHL20(2)<--   atgtttgggatgaaactaatattatatgttgtggtttcgagtttagggagattacggatttcggcccaaaacttcttggtattaaaaaaaaaaaatctaa  15236500                                                             <---------AHL20(2)                                                          <---------AHL20(2)                                                        --------->AHL20(2)                   <------------CBF                     <---------YAB1        <---------YAB1                               --------->ICU4        <---------AHL20(2)                         <---------AHL20(2)       --------->AHL20(2)                          <---------ICU4       <---------AHL20(2)                         --------->AHL20(2)      --------->YAB1                            --------->YAB1  --------->AHL20(2)                     <---------HSFB2a(2) <---------AHL20(1)                 <----  <---------AHL20(2)                     --------->HSFB2a(2) --------->AHL20(1)   <----------DOF2 --ARR10--------->AHL20(2)               ------>ZmHOX2a(1)--------->AHL20(2)     ------>ZmHOX2a(2) -------DAG2--------->YAB1               --------->LBD16<---------AHL20(2)     --------->ARR11(3)  <- --------DOF2     --------->ATHB12      <---------LBD16--------->TOE2(3)       <---------ARR11(3) ---   ctttttaattttaattagaaagattgaatttggacttgttttcctggaaataataaatattaatatatcactgagagttttgatctttgttgaaaatttg  15236600                   --------->ATHB12--------->ANAC55(2)       --------->ARR14(2)          <---------ANAC46       --------->AHL20(2)       --------->GLK1(2)           <---------ANAC55(2)    --------->ATHB51       <-----------ARR10          <---------LBD16        <---------MYB52(1)       <---------ARR14(2)   <---------DOF5.7(2)  <---------MYB46(3)      <---------GLK1(2)    <---------WRKY12 --------->At4g35610 --------->SPL7  ------->TEIL<---------TOE2(3)  --------->ALFIN1 -------HVH21   ----------------->AGL1      <---------At4g35610     --------->ANAC58 --------SPL7   <---------AtLEC2 --------->MYB52(1)      --------->ICU4 ------>ETT(1)--------->AtLEC2--------->ANAC46<---------ANAC46      --------->ANAC58   tcggacgagaatctccatgcatgtttgggtaaacgttacggattagagctgtggatgccattattttgctaagcaaaattttctcttaagtagaacaaag  15236700                                                                                               <-----                                                                                             <-------                                          <---------ICU4                                     --------                              <---------YAB1             ----------->RAV1(2)                <--------                        <-------TEIL --------->ZAT14   <-----------GT1                 <---------ZAT6                    <---------ZAT6<---------ANAC46  <---------AHL20(2)             <---------ANAC46             <-----------GT1--------->AHL20(2)  ------>ZmHOX2a(1)             --------->MYB52(1)  <--   tattacaatgacatataacctagtgatacattatttatgtgtagtcattcctatttaaaacctgactaaaacatataaactaatggtttgtgttatcatc  15236800                                                                                      --------->YAB1 ----YAB1                                                             <-----------RAV1(1) --ICU4                                                        ----------->GT1       <---------YAB1 ->YAB1                                    <---------YAB1     --------->CCA1(2) <---------MYB52(1) -YAB1 --------->KAN4(2)            ------->TEIL         ---------->DOF2      ----------->GT1 -------YAB1 --------->SPL7 ------>ZmHOX2a(1)     <-----------GT1<------ZmHOX2a(1)   <---------AHL20(2)   actattgtatattcgtcccgcttcatattcctataatgtatgtttctgattttaaccaaaaaagataggaaaatgttgtcccgttatattataaacatat  15236900  Previous    Next  AGI:  At3g43270.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT4G33220.1); similar to Pectinesterase PPE8B precursor (Pectin methylesterase) (PE) (GB:Q43062); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 15233113    to: 15236448    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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