Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------AHL20(2)                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                                <---------ICU4                                                                              <---------MYB59                                                                              --------->TOE2(3)                                                                    <---------STY1(2) ------MYB46(3)           --------->YAB1 --------->YAB1             --------->STY1(2)   tgttccaaatgacaactctctaggttaatcacaatgctcacaaacataactatatatgtgagagactacttgctagataacctaattacatgggtttgga  15218000                                                                                    --------->ANAC46                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                               ------->MYC2                                                                               <-------MYC2                                                                         --------->bZIP60(2)                                                                         --------->ANAC58                                                                         ----------->HVH21                                                                         --------->ANAC46                                                                         --------->TGA1a                                                                         --------->O2                                              <---------RAP2.6(3)    <---------ALFIN1<---------MYB52(2)                                              >>>>>>>>>>DREB1A    --------->PCF2--------->AtLEC2                                              >>>>>>>>>>DREB2A --------->ANAC46------->MYC3             <---------YAB1        <---------ZAT18    --------->AtLEC2   --------->ANAC58            <---------ARR11(3)     --------->ZAT18    --------->ANAC58 --------->ANAC46            --------->ARR11(3)     <---------ZAT14    --------->ANAC58 <---------ALFIN1           ---           --------->YAB1        --------->ZAT18   <-------TEIL--------->MYB46(3)   --------->ANAC58          ----------->GT1        <---------ZAT18  --------->AtLEC2--------->ANAC46  --------->ANAC58        ---------->DOF2    <---------AHL20(2) <---------DDF1 <-----------GT1   <-------MYC3       ---   tgagcgtttataaagataatagtttggattttatgtgtgctctaataccgacatgcatgcaataaacgaccccacacgacacatgcaagaaaccagaggc  15218100                                  --------->CCA1(2)                        <----------DOF2                       <---------ANAC58                                   --------->ZAT6             <-----------------AGL3                                    --------->GLK1(1)         --------->YAB1<---------ANAC58                              <---------RAP2.6(3) ------>ANAC58--------------->AGL15                        --------->ARR11(3) ------>ANAC58<---------------AGL15              ---------->DOF2  <---------At4g35610          <-----   cagcctcttaaacatacttaaaatggctttacaaagatagaccgcatgaaaaaaagacagagaacttgagccgatatcactatggtctaacttctaactt  15218200                                         <---------AHL20(2)                                         --------->AHL20(2)                                      --------->AHL20(2)                                     --------->AHL20(1)                                     <---------AHL20(1)                                --------->AHL20(2)                              --------->ANAC58                              ----------->GT1                              --------->ANAC58                      <---------ICU4 --------->AHL20(2)                      --------->ATHB12<---------AHL20(2)                             --------->AHL20(2)                     <---------ZAT6  <---------AHL20(2)                  ------------>CBF <----------   <---------ICU4    --------->ICU4 <---------AHL20(2)  <----------DOF2 --------->ANAC46--------->ARR11(3)  --------->ICU4   ----------->GT1  --------->AHL20(2)  <---------DAG2  --------->ANAC58--------->AHL20(1) -----DOF2<---------AHL20(2)--------------->AGL15    <-----------GT1    --------->ANAC58<---------AHL20(1)   tctaataagtatataaacatgtagtgattaccaagtaaattaatttatcaaatattcactttttgaatcgtttcaagcaatagccaaaaaaatattgaaa  15218300                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                             <-------                                                                                             ------>NtERF2                                                                                            <--------                                                                                            ---------                                                                                           <---------ABI4(2)                                                                                           --------->ATERF1(1)                                                                                           --------->RAP2.3(1)                                                       *TSS                      --------->KAN4(2)                                                      --------->LBD16          --------->ARR11(3)                                                    <---------LBD16            <---------ARR11(3)                                                   -------->P                  --------->AHL20(1)                                                   --------->MYB52(1)  ----------->GT1    <---------ATERF1(1)                  ----------->HVH21             <---------ANAC58   <---------AHL20(2)  --------->LBD16              <---------ZAT18               <---------ANAC58      <---------AHL20(2)   --------->ANAC46              --------->PCF2                <---------ANAC58 ----------->GT1   <---------AHL20(1)         <------------CBF              <---------ICU4--------->HSFB2a(2)    --------->AHL20(2)-------      >>>>>>>>>>>>>>>>>LFY             --------->YAB1<---------HSFB2a(2)    <---------AHL20(2)<------NtERF2 --CBF<<<<<<<<<<<<<<<<<LFY   --------->ANAC46   <---------ANAC58  --------->AHL20(2) <---------LBD16   ggctcaaggcccattgggccctcacatatatacgaagtctataatgacttgcttaccggaaaaccgaaataaatggaataaaatattccccgaggcgccg  15218400        <---------ANAC46        <---------ANAC58        <---------ANAC58   <-----------RAV1(1) ----ANAC58                                                                               --------->AtMYB61 ----ANAC46                                                               <-----------ARR10     <---- ----ANAC58                                                              <---------MYB52(1) <-------- --->DEAR3(1)                                 --------->GLK1(1)    ------>MYB83          --------->MYB46(3) --RAP2.3(1)                                 <---------GLK1(2)     ------>MYB46(1)  ================= -DEAR3(1)                                   --------->ARR14(2)  <---------MYB59--------->HSFB2a(2) >DEAR3(1)                                   <---------ARR14(2)  --------->TOE2(3)  <------ZmHOX2a(2) -->ATERF1(1)            <<<<<<<<<TBF1---------->DOF2      --------->TOE2(3)    <---------HSFB2a(2)   tgttcttgttgcttgctacttatcttcttcttcaatcccataaatcggatttgcaaaattttcttaacctaattcgtttcttcgcgatcaaaccacaggt  15218500                                                             <---------YAB1                         --------->ARR11(3)        --------->ARR14(1)                      --------->AHL20(2)           --------->GLK1(2)      ------>ZmHOX2a(1)<---------AHL20(2)         <---------ARR14(2)  <-----------GT1     <---------AHL20(2)          --------->ARR14(2)                               -- -----RVE1(1)   --------->LBD16<---------YAB1     <---------ARR11(3)                <---------ARR14(2) ---RAV1(2)     ------>ZmHOX2a(1)                 <---------GLK1(2)                 --------->ARR14(2) ============HOX2a_HOX2a <---------ARR11(3)     ----------->ARR10         ------>ZmHOX2a(1)      <---   attttctcctatcgattcctgaaattaaatcttttgattttgtagttcccaagattctctgtgatttttgtaattcctcgtcttccgattcgaattcaaa  15218600                                                                           --------->ARR11(3)                                                                           <---------ARR11(3)                                                                          <------MYB46(1)           -                                                                     --------->ATHB12--------->GLK1(2)                                                                   <---------WOX13(1)--------->ARR11(3)                                                                 --------->ATHB12    <-----------ARR10                    <---------TOE1(3)                      <---------WOX13(1)        <---------ARR14(2)             <----------DOF2  --------->YAB1             --------->ATHB12 <------MYB83 --------->TOE2(2)            <-----------------AGL3        <---------AHL20(2)   <---------WOX13(1)    --------->ARR14(2) -------->DOF2      <---------TOE2(3)     --------->AHL20(2) --------->ATHB12        <---------ARR11(3) ------ATHB12--------------->AGL15--------->MYB59       <---------YAB1   --------->MYB59            <   tcaaagctacggcttctttattagggtttcaatagttatgtagttttattagaaacttttgattgattgattgattaggtcttcgaaaatctgcgttttg  15218700                            <-----------GT1                        <---------ARR14(2)                        <---------GLK1(2)                <---------DAG2                                                         <---------LBD16                <----------DOF2                                                   <---------GLK1(2)         <------------------------ANAC81<---------ZAT14                       ---------->DOF2    --------->AHL20(2)  --------->ARR14(2)              <---------TOE1(3)  ------->GAMYB --------->LBD16 -------->AHL20(2)      <---------ARR11(3)              <---------TOE2(3) --------->ANAC46 <---------ARR14(2) ---------AHL20(2)      --------->ARR11(3)    <-------TEIL              --------->MYB52(1) --------->ARR14(2)   atataaatatatgttctacttttgcagatttttcaattttagtgaagtttcattttttaaggcatggctactctcaacggaaaagcttctccgtattctg  15218800                                   --------->YAB1                                --------->YAB1                                <XXXXXXXXXXXXXXXXXXXXMIR414                               --------->ICU4  --------->YAB1                             --------->YAB1   --------->ICU4                 <---------MYB46(3)                            --------->ICU4  --------->YAB1                  <---------AtMYB61                            <---------YAB1 --------->ICU4                 <---------MYB46(3)                          --------->YAB1   <---------YAB1                --------->ALFIN1                          <---------ICU4 --------->YAB1                  <---------AtMYB61                         <---------YAB1 --------->ICU4                 <---------MYB46(3)                         --------->ICU4 <---------YAB1                <---------AtMYB61                       <---------ICU4 --------->YAB1      <---------ZAT6 <---------DEAR3(1)                      <---------YAB1 --------->ICU4       <---------AtMYB61 <---------ANAC46                    --------->YAB1<---------YAB1 --------->ICU4       <---------ZAT6                   <---------YAB1 --------->ICU4 <---------YAB1 <---------AtMYB61 <---------YAB1                 --------->YAB1<---------YAB1 <---------YAB1    <---------ZAT6<-------GAMYB  <-------     --------->TOE2(3)--------->ICU4 <---------YAB1 <---------YAB1    --------->ALFIN1     ------->TEIL   aagaaaacatcaaattcaagtatgatgattatgatgatgatgatgatgatgatgatggtagtggtagtggtagtggtggtggttatgaagatggacctaa  15218900  Previous    Next  AGI:  At3g43230.1    Description:  zinc finger (FYVE type) family protein. similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G29800.2); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G29800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65179.1); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Protein of unknown function DUF500 (InterPro:IPR007461); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 15218355    to: 15220813    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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