Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ZAT18  ========                                                                            <---------ZAT14  <-------                                                                          --------------->AtSPL8                                                                          <---------------AtSPL8 ----                                                                  <---------YAB1             --------                                                                  <---------AHL20(2)        <--------                                                     <---------DAG2--------->YAB1           ---------                                                     <----------DOF2 <---------YAB1  --------->ARR11(3)                --------->ANAC46               <-----------GT1 --------->AHL20(2)    --------->AHL20(1)              <-----------GT1            --------->TOE2(3)     <---------AHL20(1)    <---------AHL20(1)         <---------ICU4                 --------->YAB1         --------->AHL20(1) xxxxxxxxxxxxxxxxxxx   gaaataactaagcatttcacaacacttagaaaatatgagttaacataaataacaactttatatgatatattataagtgtgtacaaaaaatattgtccact  15087800                                             <---------ARR14(2)     <---------ANAC46                        --------->ARR14(2)     <---------ANAC55(2)                     <---------GLK1(2)     ----------->GT1                   <-----------GT1                  --------->At4g35610 ================================================================MADS_MADS --------AGL15                     <----------DOF2                   <---------At4g35610 ----->YAB1                  <---------ARR14(2)                      --------->At4g35610 ------->AGL15----------->GT1--------->ARR14(2)                 --------->CCA1(2) -ZAT18      <----------ID1  ---------->TaMYB80       --------------->AGL15               <---------AHL20(2) >ZAT18   ---------->DOF2    <---------KAN4(2)   <---------------AGL15  <---------At4g35610    ------ xxxxx>smallRNA(se3)  ----------->GT1  --------->ANAC46    ---------->DOF2             ----------->GT1   aatagttaagtgaaaagggcaaaatagttagaatatgctttacaccatattctctacttggaaaagaaatgagcagcttatgttttaagtagttaattgg  15087900                                                           <---------WOX13(1)                                            --------->ARR11(3)                                            <---------ARR11(3)                               <---------TOE2(3)         --------->ATHB12        --------->AHL20(2)                    <-----------GT1        <---------CCA1(2)                     --------->YAB1                <---------AHL20(2)   <---------ANAC46   --------->ICU4     --------->TOE2(3)               <---------YAB1 ---------->DOF2         --------->YAB1      ----------->GT1          -- ----->GT1    <---------AHL20(2)     <---------ANAC55(2)<---------YAB1   <---------TOE2(3)       ----   gaaaatgagttgatatttttattttcatcttctaaagttacttatatatctatgaagcatgattgagaaacaattgacgttaataaaaaaaacaaggagc  15088000      <---------AHL20(1)                                  <---------ARR14(2)      --------->AHL20(1)                           <---------ANAC58      --------->ARR11(3)                           <---------AtLEC2    <---------AHL20(1)                             <---------ANAC58    --------->ARR11(3)    --------->AHL20(2) <---------AHL20(2)    --------->AHL20(1)    <---------ATHB51   --------->AHL20(1)                             <--------    <---------ARR11(3)    <---------AHL20(2) <---------AHL20(1)                 --------->CCA1(2) --------->AHL20(2) <---------ZAT6         <---------YAB1 --------->ARR14(2)   <---------AHL20(1)  <- --------->GT1      ----------->GT1       --------->AHL20(2)                   --------->AHL20(1) <-- ------>DOF2      ----------->GT1       ------->TEIL --------->AtLEC2    --------->TOE2(3)  ---------   aaagaaaatattttgaaatatagtgaaaataattctaacatgaatattatattgcatgcatatttgaattgatattcttaatatataagatgctagctat  15088100    --------->YAB1   <------ZmHOX2a(2)                                               ----------->GT1 ------->GAMYB             ------>ZmHOX2a(2)                   ------->TEIL -STY1(2)          <-----------GT1                          <---------YAB1                        --- --------TOE2(3)--------->YAB1                            --------->YAB1                          === ---------GT1  <---------YAB1                            --------->ICU4                         <---- >STY1(2)     --------->AHL20(2)                  ----------->RAV1(1)       ----------->GT1     -----   taacgatcatatgtgatataataacatgatccaattgcaaatacaaaccttgccccagaatgatgaatatagttagaatagttaacaagagtagaaatga  15088200                                                                                            <--------                                                                                      <---------ARR11(3)                      <-----------GT1                                                 <---------AHL20(1)            --------->YAB1                                                         --------->AHL20(2)           <---------ATHB12                                                     ----------->GT1        ------>ZmHOX2a(1)                                                      ----------->GT1 --->ZmHOX2a(2) <---------AHL20(2)                                         --------->YAB1   <-------- ==============HOX2a_HOX2a <----------DOF2                              <---------AHL20(2)  <-------- -----ARR11(3)  ----------->TBP                                         --------->YAB1--------->AHL20(1) ---->ARR11(3)  --------->AHL20(2)                 ---------->DOF2    <-----------TBP --------->ARR11(3)   tctcttcatcctaatgatataaattcactcttttgttttgtttttgaaaataagaaagaagaaaggctacttatttataagaagttaaaatattccttgt  15088300             --------------->AGL15             <---------------AGL15       ----------->GT1           <----------DOF2  --------->YAB1 <---------AHL20(2) -ANAC46    ----------------->AGL3                                    --------->LBD16--------->DAG2 -ANAC58    <-----------------AGL2                                   <---------LBD16---------->DOF2 -ANAC58    <-----------------AGL3  ---------->DOF2          ------------>CBF    --------->YAB1   tcaaacatatggtttctattttaagttatctatctctttaaagtccaaaaactatatggttttcccaatttccagggttatactaataaagtggtatgtt  15088400                                ------------>CBF                                ----------------->AGL1                           <---------AHL20(1)                                                --------                           --------->ARR11(3)                                           <-------TEIL<                           --------->AHL20(1)                                          --------->AtLEC2                           <---------ARR11(3)                                   <-----------GT1     <                        >>>>>>>>>>GT-3b     <---------AHL20(2)            <---------AHL20(2)---------     --------->ZAT6---------->DOF2         --------->AHL20(2)            ------------>CBF<---------AtLEC2   tagcctaagactcgctcatataaaagaaaaatattccaattcagataaaattcaaaacttacaaatatactcgtattcaatttgactacatgcatggtaa  15088500              <---------AHL20(2)              --------->AHL20(2)         <---------ATHB12      --------->DEAR3(1)     <------NtERF2                                                    ------->GAMYB    ------>NtERF2                                                  <---------DOF5.7(2)  ---------->ID1                                                 --------->DOF5.7(2) ->At5g28300 --------->AHL20(2)                         --------->TOE1(3) ---------ANAC58                                        --------->TOE2(3)  <----------TaMYB80 ---------ANAC58                           <---------DAG2       --------->TOE1(3) -->GT1------>NtERF2                       <----------DOF2      --------->TOE2(3)------>ZmHOX2a(1)  <   tttcgtcgccaacgattaaattgcaatatcaaactaagtcttagactttttggcaaaaccttaaaacgttaaccctcatattcctcttgaaaaatagttt  15088600                              ----------->HVH21                              --------->ETT(2)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                    <                       <---------AHL20(2)                                                         <--                       <---------YAB1                                                             <--                     --------->TOE1(3)                --------->YAB1                     <xxxxxxxxxxx                     <----------DOF2           <---------LBD16<----------DOF2         <---------AtMYB61               --------->TOE2(3)             --------->ARR14(2)                   <-------GAMYB<xxxxx    ----------->GT1  --------->TOE2(3)       <---------ARR14(2)                   <---------At4g35610 -----------GT1--------->TOE1(3)        <---------ANAC46 <-----------GT1 ------>ZmHOX2a(1)  xxxxxxxxx   tttatctagtttaatagccttaactttaattgttgacagtttgagggtattcggaagtataactctttttttctcctaaatttcagttgtggtcttgtta  15088700  Previous    Next  AGI:  At3g43083.1    Description:  LCR33 (Low-molecular-weight cysteine-rich 33). Identical to Putative low-molecular-weight cysteine-rich protein LCR33 precursor (LCR33) [Arabidopsis Thaliana] (GB:P82748); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851) Range:  from: 15086828    to: 15088209    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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