Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 <xxx                                                        ===================HOX2a_HOX2a          -----                                                      <---------ARR11(3)                        -----             <---------AHL20(2)                 <---------YAB1                                 ------ ------>AHL20(2) --------->AHL20(2)           --------->YAB1                                 ------>NtERF2 -------AHL20(2) <---------AHL20(2)         ------>MYB46(1)                                 --------- -->AHL20(2) --------->AHL20(2)             ------>MYB83------>ZmHOX2a(2)                   --------- ---AHL20(2) --------->AHL20(1)            --------->WOX13(1)                               --------- --AHL20(2)  <---------AHL20(1)          --------->MYB46(3)                                 --------- --AHL20(1) --------->AHL20(2)     ---------->DOF2    --------->ARR11(3)        <-------TEIL--------- ->AHL20(2) <---------AHL20(2) <----------ID1<---------ATHB12       ------>ZmHOX2a(1)  --------->ANAC46   ttaaataaaccaaaataaattaaaaacccaaaaaaaacaaagaaccaatcacaattgatctcttctcttcctctccaaaacatccatacaatccacgcca  15073100       <---------ATERF1(1)       ------>NtERF2  --------->RAP2.6(3) --------->MYB52(1) ------>AtMYB61                                <---------ARR14(2) xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              --------->ARR14(2) ->NtERF2                                      --------->GLK1(2) ------>RAV1(1)                                <-----------ARR10 --->DEAR3(1)                                  ------->TEIL >ANAC46           <---------At4g35610         <---------ARR11(1) >ANAC58           --------->At4g35610      <---------MYB59 >ANAC58 <---------ALFIN1                <-----------GT1 >bZIP60(2)     ---------->DOF2        <----------DOF2 >O2  <---------TCP20         ----------->GT1 <---------ARR14(1)    <---------AHL20(2)           ----   ccaaaacggctccaccattgaagctcaatagaaggtaatttctttaccgaatctactgtttttgttcaatttaagtgtgtttcaaacttgtttatagtat  15073200                                                <---------ARR11(3)                                                --------->ARR11(3)                                               --------->GLK1(1)                                               <---------GLK1(1)                     --------->YAB1            --------->CCA1(1)                                   <-           <---------TOE1(3)                   <---------CCA1(1)                                   --           <---------TOE2(3)                   --------->RVE1(1)                              <------         ----------->TGA1                      <---------RVE1(1)             <---------YAB1 ---------      --------->ALFIN1         --------->ZAT6 <---------ARR11(3)          <---------YAB1    ------>ZmHOX2a(1) ------->GT1  <---------MYB52(1)              --------->ARR11(3)     <---------ICU4   <-------TEIL---   agaaacaagtgttgacgttagatttataatgtaagactagggttcttagatatcttgaaaattttgtttcaaaattatgtttattgagttcatcctgtta  15073300         <----------DOF2        <---------ANAC58  --------->ATHB12 <---------YAB1 --------ICU4 ------->YAB1      --------->YAB1 ---MYB52(1)      <---------YAB1          <---------AHL20(2) -->GT1 <---------ANAC58        <---------ANAC46                                         <-----------GT1 ------>ICU4   --------------->AGL15--------->YAB1        <---------ZAT6     ---------->DOF2   attatcatttgctttagcctattatagtcggattacgttgataatttatggaggtatgtagtggtaatcgagcaaaacagaaagaagcatttctccaatc  15073400          <---------YAB1                                                           <---------TOE2(3)     <---------YAB1                                                               ---------->DOF2  <-     <---------TOE2(3)        ----------->RAV1(2)                    --------->ANAC58        <-------  --------->ICU4<---------TOE2(3)        <---------ZAT6              --------->ANAC58   --------->MYB52(2)   tgtagttatggtactattgatgttacaaatacaactgggactactgatacaacatgaattacagagttaacaagacaactattctaaagttagtttttat  15073500                                                                  ---------->DOF2                                                                 <---------AHL20(2)                                                             --------->AHL20(2)                   --------->YAB1                            <---------AHL20(2)                 *TSS --------->YAB1                         --------->ATHB51                ----------->GT1                              -------->ATHB1              <---------YAB1                                 <--------HAHB4              --------->ICU4                                --------->ICU4            <---------ICU4          --------->YAB1          <---------ATHB12      <---------At4g35610          <-------TEIL          ------------>ATHB5     <---------------AtSPL8      --------->At4g35610      <---------TOE1(2)        <------NtERF2       <---------At4g35610    <-----------RAV1(2) --------->MYB46(3)             ------>NtERF2    --------->ALFIN1    --------- --------------AGL15  <-----------GT1           <---------YAB1   --------->AHL20(2)         <-------- --YAB1    --------->ICU4------->GAMYB       <---------YAB1 <---------ATHB51--------->At4g35610   xxx   tctatttcaggtgataatgagtaataaccatcgcacattcatacattttgattatgggggcaattatttaaagagtggagatgaagtacaatggatttca  15073600                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                   <--------HAHB4                                                   -------->ATHB1                                                   --------->ATHB51                                                  <---------ATHB51                                                  <---------ATHB12                                                  --------->ICU4                                                --------->WOX13(1)                                              <------ZmHOX2a(2)                                             <---------ARR11(3)      --------->AHL20(2)                         <---------REM1(1)   --------->ARR11(3) <---------WOX13(1)        <-------TEIL    xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       <--------P >GLK1(1)          <----------DOF2          --------->GLK1(1) <---------MYB46(3)        <---------YAB1 -GLK1(1)       <---------ARR11(3)        <------ZmHOX2a(1)  <---------AtMYB61  ---------->DOF2 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------TOE2(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   agtgaagaagttcgtcgagctcttttgatgaaggcacctattgaggagatcaattatttagcattggttgataaaataggcagaaagatgatgctcgata  15073700                                                                          --------->YAB1                                                                         --------->ICU4                           --------->ANAC58                              <---------YAB1                           --------->ANAC58                            <---------ICU4                           --------->ANAC46               <---------AHL20(1)                           --------->AtLEC2   ------>ZmHOX2a(1)        --------->YAB1                         <---------ANAC58    --------->TOE1(2)        <---------ATHB12                         <---------ANAC58    --------->TOE2(3)        --------->ICU4     <----------DOF2                        <-------TEIL         --------->TOE2(2)<---------ARR11(3) <----------DOF2                  <-------TEIL            <---------ARR14(2)  --------->ARR11(3)------>ZmHOX2a(2)                 --------->GLK1(2)        --------->ARR14(2) <---------CCA1(2)--------->ARR11(3)          <---------At4g35610 <---------------AGL15       --------->AHL20(1)  <---------ARR11(3)          --------->At4g35610----------------->AGL1       <---------ARR11(3)<---------YAB1         --   caactacgagtgagatgagattcagttacatgccaatttcagtgaatcctaagaaaccaatatatatctccaatgatgatgatcttttgtgctatttgga  15073800                                                  <------NtERF2                                     <                                                 ------>NtERF2                                      <                                                 <---------RAP2.3(1)                               --                                    <------MYB83<---------DEAR3(1)                                 --                                    ----------->GT1        --------->MYB52(1)                      --                            <-------MYC2        <---------RAP2.3(3)                                --                            ------->MYC2        <---------ANAC46                               xxxxxx                            ------->MYC3       --------->RAP2.6(3)                            xxxxxxx                   --------->ZAT14  <------MYB46(1)<---------ANAC46                        <---------MYB46(3)            <---------GLK1(1)--------->ALFIN1 --------->MYB52(1)                          --------->ALFIN1    --------->AHL20(2)      <-------MYC3---------->DOF2 --------->GLK1(2)--------->ARR14(2)----------    <---------AHL20(2)   <---------AtLEC2    ----------->HVH21           <---------ARR14(2)xxxxxxxxxx --------->GT1     <---------ZAT14<--------P ----------->TGA1 ------->GAMYB            <---------AtMYB61   atggaataaaatagaattcagtgttctgcatgtggagttggtaaaagatgacggcgagaatcaacggtctgagcaaattcgagttagtgaaggtggtgaa  15073900                                                             --------->ICU4       <---------MYB52(2)                                    <---------YAB1      --------->ANAC58                                  --------->TGA2(1)      --------->ANAC58                                  <---------TGA2(1)   <-------TEIL                                         <---------bZIP60(1) ------MYB46(1)                                         --------->bZIP60(1) ------MYB83                                         <---------YAB1                    <---------ZAT14 ------->MYB111(1)                                 <---------ICU4                      --------->ZAT18 ------->MYB46(2)                                  --------->YAB1                   <---------ANAC46 ------->MYB59           <---------ANAC46         <---------YAB1                --------->ZAT2 ------->MYB111(2)       <---------ANAC58         --------->ICU4                <---------At4g35610 xxxxxxxxxxxxxxxx>smallRNA(se3)                 --------->YAB1                  <---------ZAT2   ---- xxxxxxxxxxxxxxx>smallRNA(se3)                 <------ZmHOX2a(2)                --------->At4g35610 ->GT1--------->ANAC46   <---------ANAC58     --------->ARR11(3)              --------->ZAT18    ---- xxxxxxxxxxxxx>smallRNA(si3)                  <---------ARR11(3)         ---------->DOF2         ----   gtaggtgcaagtaacaaggagtttgtttcttgtggaataactcgaagagatcatgatgatgtcatgattctatatgaaagtgagctgtgtgaacagaata  15074000  Previous    Next  AGI:  At3g43050.1    Description:  transposable element gene. Mutator-like transposase family, has a 5.0e-39 P-value blast match to Q9SUF8 /145-308 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 15073517    to: 15075564    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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