Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->TOE2(3)                       <-----------GT1                    <---------ICU4                                                               <---      <----------DOF2--------->KAN4(2)                                                  --------->AHL20(2) <---------ANAC58  <---------YAB1                                         <-----------------AGL3<---- <---------ANAC58  --------->ICU4                            --------->WOX13(1)  ----------->GT1-----   attgggttctttgttcgagtcattattcccttacataaatctacaaacaaatttctctaatttcaatctaattctatctaaaattgaaaataaaacaata  14906400                                                                  ------>MYB83                                                                  ------>MYB46(1)                                    ---------->DOF2          <-----------GT1                        <                               ----------->GT1        --------->ANAC58                              -                               <----------ID1         <---------ANAC55(2)                        <---                            --------->DAG2            --------->ANAC58                       ------->TEIL --------GT1<xxxxxxxxxxxxxxxxsmallRNA(i)              ----------->GT1                     --------->ANAC58 -----ARR11(3)             ---------->DOF2   <---------ANAC55(2)<---------MYB59     <---------WOX13(1) ---->AHL20(1)      <------ZmHOX2a(2)--------->DAG2   --------->ANAC55(2) >>>>>>>>>TBF1   --------->ANAC58   tactagaccaagttagattgggatcaacaaaaagggataaaagtgaaacgtgaagaacgtaattaaccaaattgaagaagaagtagattgacacgaattt  14906500                 <------ZmHOX2a(1)                                                                  -                ----------->GT1                                                                     <       --------->AtLEC2                                                                             <    <---------AHL20(2)         ----------->GT1                                                   ---- ---------------AGL15 --------->AHL20(2)              ----------->GT1       ----------->GT1      <--- -------------->AGL15 <---------AHL20(2)              <----------ID1 --------->AHL20(2)         ----- --------GT1   <---------TOE2(3)               <---------TOE2(3)  --------->ATHB12      <---------AHL20(2)   tactaatttatgcaaataaggaaattatatatgtagttataccaagtttaatgaagacgaaaaaacattgattaaaaatggtaaaaagaatttatcgatt  14906600                                                                <--------P             ----------->HVH21                                <------MYB46(1)        <---------TOE1(3)                                     <------MYB83        <---------TOE2(3)                                    <------MYB46(1)      ---------->DOF2      ---------->DOF2                   <------MYB83     <---------AHL20(2) --------->TOE2(3)                 <---------ANAC58 --------->AHL20(2)    <---------ANAC58                   <---------ANAC58 <---------AHL20(2)    <---------ANAC46               <---------ANAC58 -------->AHL20(2)     --------->ANAC55(2)            <---------ANAC58 ---------AHL20(2)     <---------ANAC55(2)          <-----------GT1 ---------AHL20(1)     <---------ANAC58     <-----------GT1<--------P ----->AHL20(2)        <---------ANAC55(1) <-----------GT1<-------GAMYB ------AHL20(2)---------->ID1          <---------AHL20(2)--------->ATHB12 ---->AHL20(2)<---------WRKY18(1)      --------->AHL20(2)<---------MYB46(3) <-------TEIL ----------->GT1   aaattatttaaaggtttgacccattacgtaaaagtcggaatttttttacccattttacttggttgggttagtaatagattcagtttttaaggggtttcaa  14906700                                               <---------YAB1                                              --------->AHL20(2)                                    --------->AHL20(2)                                   --------->AHL20(2)                     ---------->DOF2<---------AHL20(2)                    <---------AHL20(2)        <---------AHL20(2)                             --------                --------------->AGL15   --------->YAB1  <------ZmHOX2a(1)           <---------HSFB2a(2)             <-----------GT1  --------->YAB1  <-----------TBP       --------->GLK1(1)      ----------       <---------ATHB12      ----------->GT1<---------YAB1  <---------ARR14(2)      --------->HSFB2a(2) <----------DOF2<---------------AGL15   --------->TOE2(3)   --------->ARR14(2)   ------>ZmHOX2a(1)   agtctttcactcatttttcgatttaaagaaaatgaaaattaatcttatttttataagaggagtatttgagaattctattactccttcgagagcccctgag  14906800                                                                               --------->ZAT2                                                                               <---------At4g35610                    <-----------------AGL3                             --------->YAB1                --------->WRKY38(1)                                    -------->ATHB1                --------->ETT(2)                                       <---------ICU4                <---------ETT(2)                                       <--------HAHB4               <------NtERF2                                           --------->ATHB51         -----             <---------ANAC46             <---------ANAC58             --------->ATHB12     ---------           <---------ANAC58               <---------ANAC58   ---------->DOF2   <---------ZAT2   -----           <---------ANAC58            <--------P           <---------AHL20(2) --------->At4g35610           *TSS--------->ATERF1(1)   <---------MYB46(3)<-------TEIL   <---------ATHB51      ---------         ------->MYC3            --------->ICU4------>ZmHOX2a(1)      --------->ICU4        --------- ->LBD16 <-------MYC3  <---------DAG2--------->ATHB12  ------->TEIL   <---------YAB1      --------->CCA1(2) ->RAV1(2)--------->ALFIN1      <---------YAB1--------->TOE2(3)  <------ZmHOX2a(1) --------->ALFIN1   aatttcttccatgtggtgtcgaccaatttttggtattaatggttgcttcctcaaatgtacatttaaaggacaattattagcagctgtggaagagacgcaa  14906900                                                            <------MYB46(1)                                                            <------MYB83 <---------HSFC1(2)                                                        <---------GLK1(2)--------->HSFC1(2)                  <---------ANAC58                      --------->ARR11(1)     --------------->AtSPL8                             <---------ARR14(2)             --------->AHL20(2) ---->ANAC58      <---------ANAC58                      --------->ARR14(2)             <---------AHL20(2) >ANAC58          <---------ANAC46                   --------------->AGL15          --------->ARR11(3) ---->ANAC58     --------->ATHB12 <---------ANAC46  <-----------------AGL3          <---------ARR11(3) >ANAC58 ------->TEIL    <---------REM1(1)     <------ZmHOX2a(1)   ---------->DOF2----------->ARR10 >ANAC46<-----------GT1<-------GAMYB--------->ALFIN1<-----------------AGL2 <----------DOF2   acaatggtatgtaccatattgcttgggttgtagttgatgtggagaacgaggataactagatttggttcttaaagaagctttgagtagattttatttgcaa  14907000                    --------->ARR11(3)                    <---------ARR11(3)                 --------->YAB1                <---------YAB1         --------->CCA1(2)         <---------GLK1(1)         --------->GLK1(1)        --------->ARR11(3)        --------->ARR14(2)        <---------ARR14(2)             --------->ANAC58     <---------TOE2(3)            --------->DAG2   <---------WRKY38(1)          ---------->DOF2                                                     <   <---------WRKY12--------->CCA1(1)   --------->ANAC58                    <---------AHL20(2)       -  --------->WRKY18(1)     <---------WOX13(1) --------->TOE2(3)             --------->AHL20(2)    ---- <-----------HVH21 --------->RVE1(1) --------->CCA1(2)          <---------YAB1            <---------AHL20(2)   gagggtcaaggatatactataatatctgatagacaaaaggtatgcaatctcagtattttttgtattctaaatgtttttttaatatttgatattttttttt  14907100                                                                               <---------HSFB2a(2)                                                                    --------->TOE1(1)                                                                    --------->TOE2(1)      <---------YAB1                                              --------->TOE1(2)     <-----------GT1                  --------->At4g35610         --------->TOE2(2) <-------TEIL <---------AHL20(2)                   <---------At4g35610       ------->TEIL   ------>ZmHOX2a(1) ---------AHL20(1)         <---------MYB46(3)        ----------------->AGL1  <---------ANAC46 -------->AHL20(1)       <---------ANAC58       <-----------RAV1(1)<---------LBD16 --------->CCA1(2) ----->AHL20(2)          <---------ANAC58 --------->MYB46(3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   tatatattttcattctctgtatttagggcttgttgaatgcagcatccatcgtgttgcctaatgttgaacctcggatgtgtcctagatacatctacaaaaa  14907200                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                     ------>ZmHOX2a(2)                                              ---------->DOF2        ====================HOX2a_HOX2a                    ---------->DOF2        <---------HSFB2a(2)      =====================HOX2a_HOX2a               --------->LBD16             --------->HSFB2a(2)      <------ZmHOX2a(2) <---------ARR14(2)              --------->ANAC46      =================================================================             <---------LBD16        <-----------------AG  ----------->GT1         <------ZmHOX2a(1)           <-----------GT1         --------->GLK1(2)--------->At4g35610          ----------->GT1-----   cttgaagaaggtttttccgcatcaaagtgaaatgaagagtctgttttggaaagtagcagagagttacacgatcgctgagtatgaggaaaatatggagaat  14907300  Previous    Next  AGI:  At3g42794.1    Description:  transposable element gene. Mutator-like transposase family, has a 3.2e-05 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays) Range:  from: 14906811    to: 14910205    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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