Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ANAC58                                                             --------->CCA1(2)                                                    --------->ALFIN1   <---------DAG2                                              <---------ANAC58   --------->ANAC58                            --------->GLK1(1) <---------ANAC58   --------->ANAC46                <---------AHL20(2)  --------->ARR11(3)      --------->ARR11(3)                --------->AHL20(2)  <---------ARR11(3)      <---------ARR11(3)              ---------       ---------->DOF2<---------ANAC46   <----------DOF2    <-----------ARR10              <---------GLK1(2)   caaaaacaaaaaagaagattaattgtggagaaatcgaagatgtctttagcgtaagtggagaagatttaagccaatttttgaagaagtctagtagattcta  14902700                --------->TOE2(2)                --------->TOE1(2)              --------->GLK1(2)              --------->ARR11(3)              <---------ARR11(3)   --------->GLK1(2)              <---------ARR14(2)  <---------GLK1(2)                                    --------->DAG2     <---------At4g35610 <---------bZIP60(2)                               <<<<<<<<<MYB2    --------->ANAC58  ----------->HVH21              ----------->GT1     <------MYB83 ---------->DOF2    --------->ANAC58  ----------->TGA1  --------->ANAC46      <---------TOE2(3)   --------->ANAC46 >GLK1(2)     --------->ARR14(2)----------->ARR10    --------->ICU4      <------MYB46(1)     <-------   tattgtaagctactaaaatctgcgatgacgaggtaagattctacaaaactaagtaatgtttattaagtttttgtttggttttctacccaaaagttgtgta  14902800                                          --------->ATHB12                                         <---------YAB1                              --------->At4g35610                              <---------At4g35610                         ------>MYB46(1)                   --------->ZAT14       --------->ICU4                   ------>MYB83               --------->ATHB12        --------->YAB1                   --------->MYB46(3) --ANAC46     <-------TEIL   --------->MYB59                 <----------DOF2        xxxxxxxxxxxxxxxxx   tttgttttgttttcgattcattgtactaagttagctcattttcatgatttgagagtcaaaattctttttgttcaccaactgtttgatgaaatgtctgaga  14902900                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                       <---------ARR14(2)                                                                     <---------MYB46(3) --------->ZAT14                            <---------ANAC58          <---------ANAC58 --------->ARR14(2)                   <----------DOF2                    <---------ANAC58 --------->ARR11(3)                   <---------DAG2         --------->ZAT14  <---------ETT(2) <---------MYB46(3)             --------->YAB1 <---------ANAC58     <---------ZAT6     <---------ANAC46    <---------ZAT14 xxxxxx>smallRNA(si3)     <---------YAB1  <---------ZAT14 ---------->ARF1<------------CBF    <-------   gagtgcaagttttaaacataacttttttatgcttgaagctatactgaagtagtgttccatgtctaccatggtggatattgggtgaagcattatactgggg  14903000                                                                            <---------At4g35610                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                      --------->MYB52(1)                                                                     <---------WRKY12                                                                     <---------WRKY38(1)                                                                     *TSS   --------->At4g35610                                                                 --------->MYB59                                                               <---------MYB52(1)                                           <------------CBF<---------At5g28300     <---------CCA1(2)                ----------->GT1     <-----------GT1------->GAMYB              < --LBD16--------->YAB1       ----------->GT1      <------ZmHOX2a(1)<-----------HVH21  <------ZmHOX2a(1)   atttatcttatcttgatggtcatgaaatgaagagtataacatgtaaattggaggagttttttacagttatgtcaacggagatgagcgaggagttagatgg  14903100        <------MYB83        <------MYB46(1)       --------->MYB59                          <---------ANAC58                           >>>>>>>>>>E2Fc     --------->ARR14(1)                         <---------ANAC58                           >>>>>>>>>>E2Fd     --------->CCA1(2)                        --------->ARR11(3)                           >>>>>>>>>>E2Fa    <---------ARR11(3)                ----------->RAV1(1)                                  >>>>>>>>>>E2Fe    --------->ARR11(3)                --------->MYB52(1)                                  --------->LBD16    --------->ARR14(2)             --------->ANAC58                                       -----------    --------->ARR11(1)             --------->ANAC46            --------->CCA1(2)         <---------ANAC46    <---------ARR14(2)             --------->ANAC58         ----------->GT1         ----------->HVH21  ----------->ARR10 <---------------AGL15     <---------ARR11(3)                 <-------MYC3 ---------At4g35610----------------->AGL1------->GAMYB   <---------ANAC46        ------->MYC3   gcagaagatttggtataagttgccattcgaagaagctaagcaacagaagagcttgagtaatgtggatataagttttaagaacatgtgtgaagcgggaaaa  14903200                   <---------ARR14(2)                   --------->ARR14(2)                   <---------ANAC46                   ------->TEIL                        ------->TEIL          --------->HSFB2a(2)                  ----------->HVH21          <---------HSFB2a(2) --------->AHL20(2)  <---------bZIP60(2)         <---------LBD16 <---------MYB52(1)  <---------ICU4      <---------GLK1(1) --------->TOE2(3)   ------>ZmHOX2a(1)  --------->ETT(1)<---------CCA1(2)     --------->ARR14(2)                                 ---------- >GT1 --------->GLK1(1)----------->GT1  <---------ARR14(2)    ----------->HVH21       <---------ZAT6   tgggtcggatttctggatgtgtatctcgttaattcaatagagcatcctcatgacatggacgtgaatgacccatttgaagaagagattagagttgaaagga  14903300                                                              <---------ICU4                                                              --------->YAB1                                                              -------->HAHB4                                                             <---------ATHB12                                                            <---------TOE2(3)                                                           --------->YAB1                                                     ------>MYB83                                                     ------>MYB46(1)                                                   <---------MYB111(1)                                                   <---------MYB55(2)                                                   <---------MYB111(2)                                                   --------->AtMYB61                                                   <---------MYB46(2)                                      --------->YAB1--------->MYB55(1)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <------ZmHOX2a(2)            <---------MYB52(2)                     --------->ARR14(2)            <---------MYB59                     <---------ARR11(3)           --------->ANAC46                            -------   <---------ANAC58  <---------ARR14(2)         <---------ALFIN1   <---------YAB1            <-------TEIL   <---------ANAC58  --------->ARR11(3)      --------->ANAC46--------->ICU4    <---------At4g35610 >DOF2 <----------DOF2--------->CCA1(2) <---------YAB1 --------->ZAT6 --------->CCA1(2)     ---------   atatggcttcttttgttgatgaagatccaaattttgactaccatgatacaccacctaactctaatgatgaagatagaggggagcagtttgtaagattcag  14903400                      <---------MYB52(1)                 --------->YAB1                <---------YAB1              <---------ICU4             <---------YAB1           <---------ICU4           --------->YAB1                              --------->ANAC58           <--------ATHB1                              --------->ANAC58           --------->ATHB12                          ---------->DOF2          <---------ATHB12                    <---------At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      --------->ANAC58 -->YAB1  --------->ICU4       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                       --------->CCA1(2) >CCA1(2) <---------YAB1     <---------LBD16 --------->ANAC58                  <---------AtLEC2   aatgggtatacaatgattatcacagttgtgtctcggatgggtattgtaagctactaaaagccaatgtgactgcaaaattgttcatggatgagataagaac  14903500             ------->GAMYB                                              <---------ZAT6      ---------          <-----------GT1                   <---------SPL7     ----------->GT1              ---------       --------->YAB1                     --------->ALFIN1  --------->ANAC58              ---------->DOF2      <---------YAB1                 ---------->DOF2        --------->ANAC58             <------ZmHOX2a(1)   <---------YAB1     --------->AtLEC2    <---------------AtSPL8 ----------->HVH21 ---------->DOF2   tcattttgattataaccgaatgccattcaagatgaaattcaaaggtggtaccatttgatggcaagcagtgacaagtgtaagaaggcaaagaggaaagtaa  14903600  Previous    Next  AGI:  At3g42792.1    Description:  transposable element gene. Mutator-related transposase, temporary automated functional assignment Range:  from: 14903069    to: 14903883    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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