Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->GLK1(1)           <---------GLK1(1)          <---------ARR14(2)                                           <---------ARR11(3)          --------->ARR14(2)                                           --------->ARR11(3)         <------ZmHOX2a(1)                                             <---------GLK1(2)     --------->MYB52(1)                                         <---------AHL20(1)     ---------->DOF2                     --------->HSFB2a(2)    --------->AHL20(2)            <------ ------>ANAC58                           <---------HSFB2a(2)    --------->AHL20(1)            ------- ------>ANAC58                        <---------ARR14(2)        <---------ARR11(3)  ---------->DOF2 = ------>ANAC46         <---------LBD16--------->ARR14(2)   --------->MYB46(3)   --------->ANAC46    < --->MYB52(1)    <---------GLK1(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <-----------GT1    <------   ccgaaaccaaaggatacccgattttttcggaaatttagcagttctgaaaaccgaaacccgaaccaatattttagatttttctacccaaaagaccagtaca  14881800                                                                          --------->ZAT18 ---ZAT18                                                                 <---------ZAT18 -->ZAT14                 --------->ZAT14                    --------->MYB52(1)        <---------TOE2(3) =============================HOX2a_HOX2a                    <-----------GT1           ----------->GT1 ------ZmHOX2a(2)      ------>ZmHOX2a(1)             ----------->GT1     <---------ANAC58 ---ZAT14<-----------GT1  --------->ARR14(2)   ---------->DOF2           <---------ANAC58       -----   cgatcgagttttatccgagcccatcctgtatacccgaatgcccagccctaaaaggctgaaaattaaccgattagtgtgtgctaagaattaagttaaatct  14881900                <---------ICU4                                      ----------->RAV1(1)                --------->ATHB12                                   --------->ANAC46                <--------ATHB1                                     --------->ANAC58                -------->HAHB4                                     <----------ID1               --------->ICU4                                      --------->ANAC58               <---------YAB1                         --------->LBD16             <---------ICU4                          <---------------AGL15            --------->ICU4                           --------------->AGL15          --------->YAB1    --------->TOE2(3)        --------->HSFB2a(2)       --------->YAB1       <---------MYB59          <---------HSFB2a(2)      <---------ATHB12      --------->TOE1(3)       ----------------->AGL1  ------------>CBF    ------>ZmHOX2a(1)             <-----------------AGL1 ------>HVH21--------->YAB1<---------ANAC55(2)      <-----------------AG   gacattcaatgaccataatgattcctattacctaaacccaaaaacatttgcacttccccaagaggcaagacgacataagtttgaatacatgtctcaagag  14882000                                                                           <---------AHL20(2)                                                                          --------->AHL20(2)                                                                        --------->TOE2(3)                                      --------->ZAT18           <---------ATHB12                                      <-------TEIL          ------------>CBF                                 ---------->DOF2        --------->MYB46(3)<---------AHL20(2)    <----            <----------DOF2   <----------DOF2   <---------TOE2(3)   <----------DOF2    <---------YAB1   tctaaatattctatctttaagtcaaataatccctttaaagtgcatcgattaagatgaaacagcccaattactttcattaattttagactatgactctcct  14882100                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                    --------->GLK1(2)<------------CBF                              --                               ------>MYB83        <---------YAB1                                  --               <-----------GT1----------->RAV1(1)<-----------GT1                                   <-        ------->TEIL        --------->MYB46(3) <---------KAN4(2)     <---------YAB1                --     <---------ATHB12 ----------->TBP   -------->P>>>>>>>>>>>>>>>>>LFY                             <- --------->MYB46(3) <---------DAG2  <---------ARR11(3)     <-----------GT1                    ------- ------------>CBF   <----------DOF2 --------->ARR11(3)    <---------ZAT14    <------------CBF ------- ------DOF2   <---------CCA1(2)------>MYB46(1)--------->YAB1     <----------DOF2    <------------CBF   ttaaccaatgaatgttatatccctttataaaccaacaaaatctaccaagaataaccattgtttactgcattatgttttgtattgagaattgatatcaagc  14882200                                                                                            <--------                                                                                           ------>ZmHOX2a(2)                                                                                           ==========        --------->ZAT6                                                                    ===========     ----------->HVH21                                                                    <------ZmHOX2a(2)   --------->At4g35610                                                                   <---------AGP1   <---------At4g35610                                                                   <---------ARR11(3) --------->ZAT18                                                                         --------->ARR11(3) <---------ZAT14                                                                         --------->ARR14(3) --------->ZAT14                                                                         <-----------ARR10 ----->MYC2                                                                              <---------ARR14(3) ------MYC2                                                                              --------->ARR14(2) ------PIF5                                                                              --------->AGP1 ----->PIF5                                        --------->ATERF1(1)                   <---------ARR14(2) ----->MYC4                                        <------NtERF2                     <---------LBD16 ----->MYC3                                     <------NtERF2                  <----------DOF2 ------MYC3                              ---------->DOF2 ------->PIF5          <---------DAG2 ----->PIF4                           --------->ANAC58   <-------PIF5   ---------->DOF2 <---------CCA1(2) ------PIF4           <---------YAB1  --------->ANAC58 ------------>OsbHLH66--------->ARR11(3) -->ANAC58            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ZAT2   <---------ARR11(3)   ---- -->ANAC58    ---------->DOF2     <---------------------WRI1     ------>ZmHOX2a(2) <-----------GT1   atgtgctctgacactggaaagagtatgatggaggccatcgaagcaaaggaggcagagcccgtgctgatcgctggaaaagaactttttcccagatctttcc  14882300                                        --------->TOE1(3)                                       <-----------------AGL3                                       <                                       ==============================================================                        <-----------ARR10                                            --------->ALFIN1             --------->ATHB12   --------->ZAT18                                    ----------->RAV1(2) --DOF2   --------->YAB1--------->ARR14(2)                       ==================================== ===HOX2a_HOX2a         <---------ARR14(2)            --------->TOE1(1)    <---------ARR11(3)     --- ===HOX2a_HOX2a         --------->GLK1(2)        <------ZmHOX2a(1)         --------->ARR11(3)   ----- -->ZmHOX2a(1)         <---------GLK1(2)--------->TOE2(3)        ----------------->AGL3       -------   ttatgggcataaacatcatgggtgagaatctgagtgagccagccttaagtaggacctggtactggtctccaatagaaggtcttaagcctgggggagcaat  14882400                         <------ZmHOX2a(1)                        <---------At4g35610                      <-----------RAV1(2)                   --------->DAG2             <---------------AGL15            --------->bZIP60(1)                                                          --------->ARR11(3) ------ZmHOX2a(1) ---------->DOF2                                                    ---------->DOF2 ============================MADS_MADS                                             --------->ANAC58 ============================MADS_MADS       <-------TEIL                          --------->ANAC58 ------>MYB59--------------->AGL15       ------->TEIL             --------->ZAT6 <------NtERF2 ---->ICU4  <---------bZIP60(1) <---------AtLEC2           <---------MYB52(1)  --------->ANAC58 ----- -->WOX13(1)<-----------------AGL1 --------->ICU4         ----------->GT1      --------->ANAC58<-----   taggaagacgaatgacttcataaggcaggagattgcaaggatgaacatccatcttgaaaccggtatcaactctaccttgaggcgcaagaaaggtattgtc  14882500                                                                                                -----                                                                                               ------                                                                                             --------                                                --------->GLK1(1)                            <-------                 <---------ARR14(2)             <---------GLK1(1)                        <---------MYB46(3)                 ------->TEIL                --------->LBD16                            <---------ANAC46      <------NtERF2                         --------->ANAC46                            --------->ALFIN1    --------->ALFIN1                        --------->LBD16                           --------->MYB55(2)  <---------ANAC58                         <---------LBD16                            <---------MYB46(3)  <---------ANAC46             ------->TEIL--------->LBD16                           --------->ALFIN1  <---------ANAC58 --------->MYB46(3)      <------NtERF2         --------->CCA1(2)   <---------AtMYB61 ---->ATHB12     --------->ARR14(2)       <---------LBD16  ------->GAMYB          <-----------RAV1(1) ----YAB1       <---------CCA1(2)    <----------TaMYB80  --------->At4g35610   <---------ARR14(2)   attggggtggcaagggctgtatccactgaaatgtatcgcatagtccccggaaacctcacaactgaagagatggacactgcaaaactggtggtgggagatg  14882600                                                                       --------->ANAC58                                                                       --------->ANAC58       --------->YAB1               <---------MYB52(1)             --------->ANAC58      <---------YAB1        --------->ZAT18                        --------->ANAC46      <------ZmHOX2a(2)     <---------ZAT18                        --------->ANAC58     --------->ARR11(3)  --------->TGA1a                        <-------TEIL     <---------ARR11(3)  --------->O2                         <---------ARR14(2)   ----------->ARR10     <---------O2                         --------->ARR14(2) ---->ATHB12             <---------bZIP60(2)                  <---------GLK1(2) --->ICU4                <---------TGA1a                --------->At4g35610 --------->DAG2 ->At4g35610             <---------ANAC46 <---------MYB46(3)----------->ARR10----------->GT1 --At4g35610<---------ZAT6  --------->WRKY38(1)         <---------At4g35610---------->DOF2          -   atgggaagatcatagtgatcaaattcgacgtggactctgttaagttgttgctactcttagctcagattcacacaaggaaaagtataaacccaaacttaga  14882700  Previous    Next  AGI:  At3g42780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09130.1) Range:  from: 14882201    to: 14882731    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version