Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   <-----------ARR10 <---------ARR11(3)                                                                              ---- --------->ARR11(3)                                                                           <------ <---------ARR14(2)                                               <------NtERF2               ------- --------->GLK1(2)                                               --------->ANAC58            <------- --------->ARR14(2)                                          --------->ANAC46                <------- ---------GLK1(2)                                            --------->ANAC58            ------->GAMYB ----->DOF2                                            <---------MYB52(2)               --------->ANAC58 -->HSFB2a(2)       <-----------GT1                    --------->MYB46(3)<<<<<<<ZML2    --------->ANAC58 ---HSFB2a(2)     <---------MYB52(2)              ----------->GT1--------->ANAC58       <---------ANAC55(2) ----->AGL15    <---------ARR11(3)           --------->YAB1---------->DOF2              --------->ANAC55(2) ------AGL15    <-----------ARR10           <---------ATHB12 --------->ANAC58         --------->MYB52(1)   aagaatcttcactctcaacatctaacccttcgaactctctaacccaataacaatgtaacaaacaagccagcactagaaccattatctgtaacggaatcat  14854300  --------->ANAC58  --------->ANAC58  --------->ANAC46 ------>NtERF2 ----->ANAC46                                                               --------->GLK1(2) ---ICU4  --------->ANAC46                                             ---------->DOF2 -->YAB1--------->ANAC46         <----------DOF2                   ---------->DOF2 --HSFC1(2)<---------ALFIN1 ---------->DOF2                      --------->At4g35610                - --HSFB2a(1)              --------->MYB46(3)                <---------GLK1(1)                    ----   cgccacgaaaacaccacattctactctaaccaaagctttagcctctctagggtctcgagtcgatatcagcaaagaaagactctgtttctctctactaaac  14854400                                 <------ZmHOX2a(1)                                ----------->GT1                         <---------MYB52(1)                        <-----------HVH21                        <-----------TGA1                       --------->TGA1a                       --------->O2                            --------->YAB1                       --------->ANAC58              --------->ANAC46                       --------->ANAC58             <---------LBD16         <------MYB46(1)     -----                       --------->bZIP60(2)          --------->LBD16         <------MYB83     -------- -------->TOE2(3)      --------->ANAC46           <---------LBD16    ------>ZmHOX2a(2)       -------- ------->RAV1(1)  ----------->HVH21           --------->DOF5.7(2)<---------YAB1             ---------   aacattaaaactgcaataaactgacccgtcagtgaggaaacatgaagcgttatccgcgcgatgaaacatgatcgagattggtgcgaagaggcactaccga  14854500                                                                                   ---------->DOF2                                                                                 --------->ANAC58                                                                                 --------->ANAC58      <------ZmHOX2a(2)                                                         --------->SPL7      ================================HOX2a_HOX2a                            <------MYB83     <---------ARR11(3)                                                      <------MYB46(1)    --------->GLK1(1)                                                       <---------------AtSPL3    <---------GLK1(1)                                                      <---------WOX13(1)  <------ZmHOX2a(1)                                                      --------->ATHB12 ----->DOF2                                                              <--------ATHB1 --------->AG                     ----------->GT1                       <---------YAB1 --------->AGL1            <---------ANAC46    <---------ZAT14        --------->YAB1                < >MYB52(1)   --------->CCA1(2) <------ZmHOX2a(1)         ----------->GT1--------->ICU4            ---   aagaggagatcagagagacgagtgagactgcgaggaaggctaaaccgagtgaagttggagggtttctaagaagaatgattggtacgaaagaacagaggga  14854600         ----------->GT1   --------->CCA1(2)           <----------DOF2      <------ZmHOX2a(1)   <---------ARR14(2)     --------->YAB1                    <---------ANAC46   <------ZmHOX2a(1)      --------->ARR14(2) --------->MYB46(3)              <---------TOE2(3) *TSS --------->ALFIN1       --------->ANAC58     <---------MYB52(2)      --------->ANAC58        <------- ------ZmHOX2a(1)       --------->ANAC46<---------HSFB2a(2)          --------->ANAC58     --------->ICU4 ------>ALFIN1          --------->ANAC58--------->HSFB2a(2)     ---------->DOF2    ----------->GT1   gaggaggaggagagtgaaattcagacacgatacgagaatgttttggaacaaacataactttctgtgaaaagaagccattgatgttttgtgaaattatgtt  14854700                                                                             <---------TOE2(3)                                                                 --------->RAP2.6(3)                                        ---------->CDC5         --------->MYB52(1) --------->MYB52(1)                                 --------->ANAC58              ----------->HVH21   <-----------GT1                             ----------->GT1        <---------ANAC46     --------->YAB1     <--------                            --------->DAG2         <---------MYB46(3)   --------->ICU4 --------->At5g28300      --------->MYB52(2)   ---------->DOF2      <-------GAMYB<---------REM1(1)----------->GT1      -- --YAB1           <-----------TBP--------->ANAC58<---------MYB52(1)     <---------YAB1----------->GT1   ttttttgtttgtttcaagttttatataggtaaagtaagaaactaagcgcccgttggggagaagatgtaacggctatgatgaggtttaacggttatattga  14854800                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                   <---------AHL20(2)        <-------                                                                  --------->ARR11(3)         <-------                            <---------GLK1(2)   --------->ANAC58  <---------ARR11(3)         --------                            <---------ARR11(3)  --------->ANAC58  <---------AHL20(1)       <---------                      <---------YAB1  <----------DOF2        <---------ANAC46            <---------AHL20(2) ----CBF            --------->YAB1<-----------GT1      --------->MYB52(1)    ----------->GT1<-------- ------->ICU4---------->DOF2--------->ARR11(3)  --------->ANAC46 <---------CCA1(2)--------->ZAT6-----   cataatgggcttcacaaaagtattgtaatagatttttgacctttagcctcacgaaaatgacggtcgtatatatttgaattagtaatactattttatcatt  14854900 -----ICU4 ---->ATHB51 ----YAB1 --->ICU4 --ICU4                                 <----------DOF2 <---------MYB59 -HAHB4                              <-----------GT1  <---------ARR11(3) ->YAB1                      <----------DOF2          --------->ARR11(3)                           <- --GT1                       <---------DAG2       ---------->DOF2                         ---------->DOF2 -YAB1--------->TOE2(3)     <---------ANAC58    <---------HSFB2a(2)             ----------->GT1 <---- ---->ATHB12                <---------ANAC58    --------->HSFB2a(2)       --------->HSFB2a(2) <------ZmHOX2a(1)   attgtttacataaatgcctgaaactaaattgcttttttttttcttttcttctcaaagacctaaaactaaattgctactcgaatagaaatttgaaaaggat  14855000          <---------AHL20(1)                                                      <-----------GT1          <---------ARR11(3)                                               <---------AHL20(2)          --------->ARR11(3)                                           --------->AHL20(2)  <---------YAB1                                                      <---------AHL20(1) <---------AHL20(1)                                                   --------->AHL20(1) <---------AHL20(2)                                                   <---------AHL20(2) --------YAB1     <-----------RAV1(1)<----------DOF2       <-----------GT1 --------->AHL20(2) -----YAB1--------->AHL20(1)--------->AHL20(2)   --------->YAB1 --------->At4g35610     <----------DOF2   tattatttttgatatatttcatgttgtccataaaatactcttttatgtcaattgtattttttaagcatctaaaatatttaaatttttcttctttctcaat  14855100                   <-----------GT1                   <---------AHL20(2)              --------->AHL20(2)              <---------AHL20(1)              <---------AHL20(2)           <---------AHL20(2)                                          --------------->AtSPL3           --------->AHL20(2)                                    --------->ARR11(3)           --------->AHL20(1)                                    --------->AHL20(1)           <---------AHL20(1)                                    <---------AHL20(1)      --------->AHL20(2)                                      --------->AHL20(2)      <---------AHL20(2)                                      <---------AHL20(2)   --------->AHL20(2)                                        --------->YAB1   <---------ARR11(3)                                       <---------YAB1 <-------TEIL   <---------AHL20(1)                               ---------->DOF2    <---------TOE2(3)   <---------TOE2(3)   --------->AHL20(1)     <-------TEIL    ---------->DOF2<---------YAB1<---------------AtSPL8   tgcaatattttaatattttatttacatatacatagactataccaaaaatcccaaaaaagattataaaaatattgaggtacaatatgagcttataagatta  14855200  Previous    Next  AGI:  At3g42725.1    Description:  similar to unknown [Olimarabidopsis pumila] (GB:ABA18101.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 14853888    to: 14854695    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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