Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                           <---------ANAC46                          <---------LBD16                     <---------ZAT14               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     --------->TOE1(3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     --------->YAB1             xxxxxxxxxxxxxxxx>smallRNA(s)  --------->CCA1(2)           --------->TOE2(3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    <---------YAB1            <---------ANAC55(2)   <---------GLK1(1)                  --------->ARR11(3)             -            --------->ANAC55(2)   --------->GLK1(1)                  <---------ARR11(3)           <--            --------->ANAC46 ----------->GT1        --------->YAB1 <---------AHL20(2)            ----        -------->HAHB4xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <---------AHL20(1)               ----        --------->YAB1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->AHL20(1)             ------       <---------YAB1--------->ZAT14   ------>ZmHOX2a(1)        --------->AHL20(2)            -------     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ARR11(3)    <---------AHL20(2)--------->ANAC58---     --------->YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->AHL20(2) --------->ANAC58<-- ----------->GT1   xxxxxxxxxxxxxxxx>smallRNA(i)  ------->GAMYB --------->YAB1--------->ZAT6   -------   gggtcgataataatacgagacggtatactacgggtgaaatcctagatataacagtcaaaatacaattatattatcttaaacactaagcaaaacaaataat  14331500             --------->AHL20(2)             <---------YAB1   --------->AHL20(2)   <---------AHL20(2)        --------->AHL20(2) -------->YAB1          <---------AHL20(2)      <------ZmHOX2a(2) -------YAB1--------->AHL20(1)                 <---------AGP1 ----->TOE2(3)          --------->AHL20(2)     --------->ARR11(3) ----->YAB1 <---------AHL20(1)                 <---------ARR11(3) --->AHL20(1)<---------AHL20(2)               <---------CCA1(2)                                   --- -->YAB1   --------->YAB1    <---------AHL20(2)--------->AGP1                                -------- ------>AHL20(2)  <---------AHL20(2)   <---------YAB1                                       <-------- -------AHL20(2)  --------->AHL20(2) --------->YAB1   --------->TOE2(3)             <---------AHL20(2) -->AHL20(2)--------->AHL20(2)    ----------->GT1------>ZmHOX2a(2)        <---------ZAT6<---------AHL20(2)   attaataaaacaaatataatttaaatttaaattatatagttataatttagatcttaacttaatgaactatatgttagtgtttctatatttttaatcagta  14331600                                                                                                 <---                                                                                           --------->ATHB51                                                                                           --------->AHL20(2)                                                                                           <---------ICU4                                                                                          --------->AHL20(2)                                                                                       <---------AHL20(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(1)                                                                          <---------AHL20(2)  <------                                                                         --------->AHL20(2)<---------AHL20(2)                                                                       <---------ARR11(3) <---------AHL20(1)                                    --------->CCA1(2)           <---------AHL20(2)    <---------AHL20(2)                                   <---------ARR11(3)        --------->AHL20(1)       --------->AHL20(2) ------>ICU4                  <---------AHL20(2)             <---------AHL20(1)    <---------AHL20(2) --->GT1                  <---------AHL20(2)                --------->AHL20(2)    --------->AHL20(2) -ICU4--------->YAB1      --------->AHL20(2)          ----------->GT1  --------->ARR11(3) <---------AHL20(2)   aaaatcaaacatagtaattgtatactaaatatttatagatataagagttgtccatttggaaaatatataaaaagatttaatctattaaataaattatttc  14331700                                                                                            ---------                                                                                   ----------->GT1                                                                                  <-------MYC3                                                                                  ------->MYC3                                                                                  <-------MYC2                                                                                  <-------MYC4                                                           --------->HSFB2a(2)    ------->MYC2                                                           --------->HSFC1(1)     ------->MYC4                                                          ------>ZmHOX2a(2)       ------->PIF5                                                         <------ZmHOX2a(2)        <-------PIF5                                                        <---------AGP1           <---------O2                  <---------YAB1              --------->YAB1                     --------->O2--------                 --------->AHL20(2)          <---------YAB1<---------HSFB2a(2)   ====================                 --------->AHL20(1)    <---------TOE2(2)--------->AGP1           --------->TGA1a  <--     --------->AHL20(2)                <---------TOE1(2)--------->ARR11(3)       <---------ANAC46 ---     <---------AHL20(2)                ------->TEIL     <---------ARR11(3)       <---------ANAC55(2) <---------AHL20(2)                 --------->ANAC55(2) <---------ARR14(2)       <--------ABF1    <-- --------->AHL20(2)             <----------DOF2         --------->ARR14(2)       <---------TGA1a  <-- -------DOF2   --------->AHL20(1)  ------->TEIL        <---------CCA1(2)         ==================== -----GT1      <---------AHL20(1)<---------SPL7<---------AHL20(2)     <---------ATHB12   --------->YAB1   tttttaattttttaaaaaatattatagcttcgcgctgtacgtatgttataatattgtagatctagaaaacaaatcacttagccacgtgtaaaaataaagc  14331800            --------->AtLEC2    --------->YAB1    ------>ZmHOX2a(2)  --------->ARR11(3)  <---------ARR11(3) ->DOF2     --------->ANAC58                                                                     ---- ->DAG2  <---------ATHB12                          ---------->DOF2                              ----- ==bZIP_DOF --------->ANAC58                     ----------->TBP------->GAMYB                   ----- -------ANAC58                                 <----------DOF2--------->MYB52(1)               ------ ------>ANAC55(2)                           <---------RAP2.6(3) --------->DEAR3(1)            <------ -------ANAC58 ---------->DOF2        --------->LBD16       --------->MYB46(3)                <------ -------ANAC55(2)                     ------>ZmHOX2a(1)     <---------ATHB12                  <------ ==bZIP_DOF--------->WOX13(1)       ----------->RAV1(2) ------------>CBF<---------ATHB12      -------   gcgtgatcttaatcaagcaaagggttttgtttacaaactcctgggccgtctttaaaagcccaataaccggcccaaacattctcagtagtatttcgaccta  14331900  <---------MYB52(1)                    --------->TOE2(3) ---->P                         <---------ARR11(3) ->MYB83          ------>ZmHOX2a(1)   *TSS ->MYB46(1)--------->ANAC58    --------->YAB1                      <----------DOF2 ----->HVH21      <---------YAB1--------->ARR11(3)               <---------------------WRI1 ---MYB46(2)     --------->TOE2(3)--------->YAB1          <---------ANAC58 ---MYB59  --------->ANAC58  <---------TOE2(3)            <---------ANAC58  ---------->DOF2 ---MYB111(1) ------->TEIL  ---------->DOF2          <----------DOF2     --------->AtLEC2   --------- -->AtMYB61--------->ANAC46--------->AHL20(2)    <---------CCA1(2) <---------DAG2           ---------   accccttatttagacgcatccttattcgattaaagataataacataaacttatctctttgccttgtctgcttttcatccaaaggtccaattagcctctga  14332000                                                                                           --------->LBD16                                                                                          ------->GAMYB                                                                                          --------->TOE1(2)                                                                                     <---------MYB52(2)                                                                                    <---------At4g35610                                                                                    --------->At4g35610                                                         ===================HOX2a_HOX2a   --------->TOE2(2)                                                         ------>ZmHOX2a(2)         ------->TEIL                                                        <------ZmHOX2a(2)       --------->DEAR3(1)                                                        ====================HOX2a_HOX2a  <-----------                                                       <---------ARR14(2)      --------->ANAC46                                                       --------->ARR14(2)    --------->AtMYB61                                                      --------->GLK1(1)      --------->DEAR3(1)                                                      <---------GLK1(1)      <---------ALFIN1      <-                                                     ----------->ARR10      --------->MYB46(3)    <--                                 <---------DAG2     <------NtERF2       <-----------TGA1 --------->MYB46(3)                             ---------->ID1        --------->LBD16      <-----------HVH21--------->DEAR3(2)   <---------CCA1(2)     <----------DOF2          --------->DEAR3(1)   --------->ANAC46--------->MYB52(1) >At4g35610      <----------DOF2 <----------DOF2 <---------LBD16     ------>ZmHOX2a(1)----------->HVH21 -->RAV1(2)     <------------------------ANAC81--------->ANAC46  --------->ARR14(2)<-----------ARR10   agcccaaatctctctctctctttctctctttctcgctttctcaatctactcgccggagatcggctcgattcctccgtcaccaccgcatctaaccggcgat  14332100                                                                                               <-----                                                                                               <-----                                                             --------->ANAC58    ------>ZmHOX2a(2)                                                             --------->ANAC55(2) <---------MYB59                                                             --------->ANAC46  --------->ARR14(2)     <---------ANAC58                                        --------->ANAC58  <---------ARR11(3)<---     <---------ANAC58                                      <-----------GT1     <---------AGP1  ------     <---------ANAC46                               <---------RVE1(1)          <---------ARR14(2)---- -AtMYB77                                          <---------MYB52(1)      <---------LBD16     <----- --------YAB1            ------->GAMYB           <---------TOE1(2) --------->TOE2(3)          <------ ---------GT1   --------->ANAC46                 <---------TOE2(2) --------->TOE1(3)      -----------   tttcattccgtcttctctacttcacaacgcagagcttcaatttctccctcgcaggtatttttcacgaaaccctaaactctggatctaatttcgcctggat  14332200   <---------LBD16 ----ARR14(2)                                                                      <---------AHL20(2) ----ARR11(3)                                                                 <-------TEIL ------MYB59                                                               <------MYB46(1)        --- --->ARR14(2)                                                              <------MYB83         ----- -->ZmHOX2a(2)                            <---------MYB52(1)         <-------TEIL  <-----------GT1<-- ----AGP1                           <---------AHL20(2)  <---------ZAT14 <---------MYB52(1)      <---- ---CCA1(2)                     <---------MYB46(3)<---------AtMYB61<---------ARR14(2) <---------DAG2 >RAV1(2)                       ----------->GT1<----------DOF2     --------->ARR14(2) <----------DOF2   ctaattggggattttagagttttgcctcgattgtttgttaaattgttagcttttggtctactctgcgaaaatacgtttggttcatttactttatgcaatt  14332300         ------>ZmHOX2a(2)         =====================================HOX2a_HOX2a        <---------At4g35610        <---------GLK1(1)       <---------ARR11(3)       --------->ARR14(2)       <---------AGP1                                          <---------ARR11(3)       <---------ARR14(2)      <---------At4g35610          --------->DAG2 -------------->AGL1    --------->ICU4 <------ZmHOX2a(1)   ---------->DOF2 ---->YAB1              <---------AHL20(2)            <--------P                <------ZmHOX2a(1) -------YAB1            <---------ATHB51             <-------GAMYB   <---------TOE2(3) -------GT1             --------->AHL20(2)     <-----------GT1 --------->ARR11(3)                  <-   accatactggatctgctaattctgaaataattcaactcataggacaattttactgggttgataaagttcttaaggtcgtttaggagccaagttcaaatgt  14332400  Previous    Next  AGI:  At3g42170.1    Description:  hAT-like transposase family (hobo/Ac/Tam3), has a 1.3e-74 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana) Range:  from: 14331938    to: 14335055    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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