Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ATHB12                                                             --------->TOE2(3)                                                             --------->YAB1                                                            <---------YAB1         <---------MYB52(1)                           <---------AHL20(1)        ----------->GT1                               <---------AHL20(2)   <------NtERF2                                      --------->AHL20(1)  <---------MYB46(3)                                  --------->AHL20(2) --------->ALFIN1                          --------->ANAC58<---------ARR11(3)                      -- <---------DEAR3(1)                        --------->ANAC58--------->ARR11(3)                   <<<<< --------ANAC58              --------->AHL20(2)      --------->AHL20(2)                        <----- --------ANAC58              <---------AHL20(2)---------->DOF2 <---------YAB1              <---------   tgggtggctctggtaatttgatttttgttttttaatttcaatctcaagtcaaagaataaattatcttaattggagagtaagagcccttgatttcttttag  14309500                                                               <---------HSFB2a(1)                                                               --------->HSFB2a(1)         --------->ATHB12                                                               <---------HSFC1(2)      <-------GAMYB                                                           --------->ANAC46           <xxxxxxxxxxxxxx                                                     --------->ZAT14                  <---------MYB46(3)     --------->AHL20(2)                        --------->CCA1(2)                      <---------DEAR3(2)     <---------AHL20(2)                        <------ZmHOX2a(2)        <<<<<<<<<TBF1<---------ANAC46 <---------YAB1                               --------->ARR14(2)     <<<<<<<<<TBF1   <---------DEAR3(1) --------->GT1     <---------AHL20(2)         --------->ARR11(3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <<<<RAP2.2       <---------AHL20(2)          --------->AGP1   --------->HSFC1(2)    <---------RAP2.6(2) ----TOE2(3)      --------->AHL20(2)          <---------ARR14(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -DOF2<---------AHL20(2)             --------->AHL20(2)<---------HSFB2a(2)         ------------>AtMYB77   attgtgatttattttgcaaattaaatctaagttttgacataaatttgagatccagttctctaagaaacttcttcttcttcaacaatggcggtttgatttg  14309600                                    --------->ANAC46          <---------CCA1(2)                                   ------>MYB46(1)       --------->WOX13(1)                                   ------>MYB83        <---------MYB52(1)                          <-                ----------->GT1  --------->TOE2(2)   ----------->GT1                   <------ZmHOX2a(2)  <-----------GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<-------GAMYB       --------->ICU4        <---- xxxxxxxxxsmallRNA(fl3)       <-----------GT1    <---------GLK1(1)        <---------YAB1 ----------->GT1   atttttgctctctctcatgggtaaaactcgtttcacctacgtagcatcgagatttcggttaatcaaatctcatgttattatggacatagatcagtaaaaa  14309700                                                                                                <----                                                                                                -----                                                                                       xxxxxxxxxxxxxx                             <---------MYB52(1)                                       xxxxxxxxxxxxxxx                           --------->ANAC58                                           <---------ALFIN1                           --------->ANAC58                                    <xxxxxxxxxxxxxxxxxxxxx                           --------->ANAC55(2)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                           <---------ANAC55(2)                            xxxxxxxxxxxxxxxx>smallRNA(s)                           --------->ANAC55(1)                <---------AHL20(2)    <xxxxxxxxxxxxxxxx                           ----------->GT1             <-------GAMYB      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <---------AHL20(2)                   --------->MYB52(2)  xxxxxxxxxxxxxxxx>smallRNA(i)             --------->AHL20(2)               <---------AHL20(2)      xxxxxxxxxxxxxxxx>smallRNA(s) <-        ----------->GT1    --------->ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <xxxxxxxxxxxxxxxxx --------GLK1(1) --------->AHL20(2)<---------YAB1     <---------MYB46(3)xxxxxxxxxxxxxxxx>smallRNA(i) -----TOE2(3)--------->ICU4--------->bZIP60(2)--------->AHL20(2)   <-----------GT1 --------->AtMYB61-   ggtttccgaatggaaatatttaaatggacacgttattctgaataccaaaaaattgtttgttgatttttttttcagtttgcagagacctccaccttcaaga  14309800           ------->TEIL --------->SPL7 -----ARR11(3) ---->ARR11(3)                              <---------CCA1(2)     ----------->GT1 xx>smallRNA(s)                      <---------MYB52(1) --------->ICU4 x>smallRNA(s)                      <-------GAMYB    <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <------ZmHOX2a(2) xxsmallRNA(fl3)                    --------->At5g28300 <---------YAB1           --------->CCA1(2) xxsmallRNA(si3)                   ----------->GT1 ------>ZmHOX2a(1)            --------->ARR14(2) --------SPL7                  --------->MYB46(3)----------->RAV1(2)            <---------ARR14(2) xxsmallRNA(si3)             --------->ANAC46--------->ARR14(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) -------->MYB52(1)     <----------DOF2 --------->WOX13(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   ccttacggacatgaaactttggtctctttacaaaccacggttaatcaaatctcctgttattatggacatggtatatagaatggatatggatcagtagaaa  14309900                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                          <----                 --------->AHL20(2)                                                             -----                 <---------AHL20(2)                                                             -----                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                            <----              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      <xxxxxxxxxxx             <---------AHL20(2)                                                       <---------ALFIN1            --------->ARR11(3)     <---------TOE2(3)                           xxxxxxxxxxxxxxxxxxxxxx            <---------ARR11(3)  --------->ICU4                            xxxxxxxxxxxxxxxx>smallRNA(s)            <---------AHL20(1)  <---------YAB1                        <---------TOE2(3)  --------->AtMYB61        ----------->GT1    ----------->GT1                        <----------DOF2  --------->AtMYB61      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <---------MYB46(3)  xxxxxxxxxxxxxxxx>smallRNA(i)   tatttccgaatggatatatttaaatggactcgttattatggaaaccaaaaacttgtttgttaatttttctttaagtttgcagagacctccacctccaaga  14310000          --------->ZAT14          <---------ZAT18                                 <------------CBF          <---------ZAT14                                --------->ATHB12   --------->ETT(2)                                     --------->ICU4   --------->ZAT18                           <---------ARR11(1)                                  xxxx -----ARR14(3)                              <---------CCA1(2)                             <xxxxxxxxxx ---->ARR14(3)                              <---------GLK1(2)                          <------ZmHOX2a(2) ---->ARR11(3)                    <---------YAB1     <---------YAB1                    xxxxxxxxxxxxxx -----ARR11(3)<----------DOF2--------->ANAC46------->TEIL--------->ATHB51       <---------ARR14(2) xxxxxsmallRNA(s)          xxxxxxxxxxxxxxxx>smallRNA(s) <---------YAB1          --------->ARR14(2) x>smallRNA(fl3)       <----------DOF2      <---------ARR14(1)    ----------->GT1--------->CCA1(2) <-   ccttgtggacagtgaactttggtttctttacaaaccacgattaatcgaatctcttgttattattgacatggtatatagaatggatatggatcagtagaaa  14310100                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                 <---------AHL20(2)                 --------->AHL20(2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                              <---             <---------AHL20(2)                                                                <-----            --------->ARR11(3)                                                                 ------            <---------AHL20(1)                                                          <xxxxxxxxxxxx            <---------ARR11(3)  <---------YAB1                                          --------->AtMYB61        ----------->GT1         --------->ICU4 ----------->GT1                   --------->At4g35610      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->DAG2                     <---------At4g35610 xxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------TOE2(3)    ---------->ID1           --------->GLK1(1) xxxxxxxxxxxxsmallRNA(i2)  ----------->GT1   ---------->DOF2                  <xxxxxxxxxxxxxxxxxxxxxx xxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              <--------P   <---------ALFIN1 --------GLK1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <-----------RAV1(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ggtttccgaatggatatatttaaatggactcgttattatggataccaaaaagttatttgttgtttttcttacaggttgcagagagctccacctccaagac  14310200                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            xxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          --------->DREB2C(2)                     ------>MYB46(1)                     <---------HSFC1(2)              <xxxxxxxxxxx     --------->CCA1(2)<<<<<<<<<SARD1                     <---------HSFB2a(1)           <xxxxxxxxxxxxx ------DAG2          ------>MYB83                        --------->HSFB2a(1)           <---------ALFIN1 ----ARR11(3)      <---------MYB59                       --------->HSFC1(2)           --------->MYB46(3) --->ARR11(3)<----------DOF2                   --------->AHL20(2)                     <---------ABI4(2) xxxxxxxxsmallRNA(le3)<<<<<<<<<CBP60g          <---------AHL20(2)                    --------->SPL7 xsmallRNA(se3) <-----------GT1          <------ZmHOX2a(2)                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   cttatggatatagaacttttaccaaatttctgagataatcgagatcgaattttttaagaagcttctcccatttgtttgtagaattggtaccaccgatatc  14310300         <---------ATERF1(1)         --------->ABI4(1)         ------>NtERF2        --------->RRTF1(3)        --------->RAP2.3(2)        --------->RAP2.3(3)        --------->DREB2C(2)        --------->ANAC46        --------->RAP2.6(2)        --------->ATERF1(2)        --------->ANAC58        --------->ANAC58        --------->DEAR3(1)        <---------ATERF1(2)        --------->RRTF1(2)       --------->RRTF1(1)       --------->DEAR4(2)       --------->ORA47(2)       --------->ERF1       --------->RAP2.6(1)       --------->RAP2.3(1)       <------NtERF2       --------->ATERF1(1)      --------->At4g35610      <---------DEAR4(2)      ------>NtERF2      <---------ATERF1(1)      --------->DREB2C(1)      <---------DREB2C(1)      <---------RAP2.3(1)     <---------DEAR3(1)     --------->DEAR3(1)     --------->RAP2.6(2)     --------->RAP2.3(3)     --------->RAP2.3(2)    --------->MYB46(3)    --------->RAP2.3(1)    --------->DEAR3(2)    --------->ERF1    --------->ATERF1(1)   <---------ATERF1(1)   <---------At4g35610   --------->At4g35610  ----------->TCP11(1) -->ARR14(2) ---ARR11(3) -->ARR11(3) ---ARR14(2) --CCA1(2) ->GLK1(1) --GLK1(1) ----------->RAV1(1)                                                 ---------------------- -MYB52(1)<------NtERF2        <---------LBD16                              ---------->DOF2 xxxxxxxxxxxxxx>smallRNA(fl3) <---------ANAC46                 ------------------------>ANAC81 xxxxxxxxxxx>smallRNA(fl3) <---------ARR14(2)          ------------------------>ANAC81      --------- xxxxxxxxxxxxsmallRNA(i2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    ---------->DOF2 ---------->DOF2 xxxxxxxxxxsmallRNA(se3)  <------ZmHOX2a(1)           ---------->DOF2  ------------------------>ANAC81   tggtgagccgccgccacaatcgataagaggaatcgtggaagggggagagagagagagaaagagagagagagaaagagagaaagagagaaagagagaaaga  14310400  Previous    Next  AGI:  At3g42130.1    Description:  glycine-rich protein Range:  from: 14309227    to: 14309869    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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