Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->AHL20(2)       --------->ANAC58 ----------DOF2                   --------->ANAC58               <----------DOF2                <---- >ZmHOX2a(2)                      --------->ANAC46              <---------ANAC58              <------ ->ARR14(2)             --------->ANAC58                        <---------ANAC58              ------- --AGP1<----------DOF2  --------->ANAC46                   <---------ICU4          >>>>>>>>>>MYB80 --ARR14(2)             --------->ANAC58              <-----------GT1  ------>NtERF2 --------->AtMYB61   ggcttttttctttaaatcacacacacacacaaacacaaacaacaatttcaagtttttttcaaaattgctttgcctccatgagtcaaaccaaaacatttaa  14243800                                                                                         <---------ICU4                                                                             --------->AGP1                                                                             --------->ARR14(2)                                                                             <-----------ARR10        ---------->DOF2 <---------DAG2                                       <---------ARR14(2)        --------->MYB52(1)         ----------->GT1          --------->ATHB51 <---------ARR11(3)       ------>ZmHOX2a(1)<----------DOF2                     <---------AHL20(2)       <---------YAB1 -------GT1          <---------ARR11(3)                     <---------ICU4  --------->GLK1(1) ---AHL20(2)         --------->ARR11(3)                     --------->AHL20(2)<------ZmHOX2a(2) -->AHL20(2)<------ZmHOX2a(1)  -------->P            --------->At4g35610    --------->At4g35610   actttgctcctaaaggaccttaagaactttatctacccagtaaaattgtagtatgagttgaattatttcagaattagcagatccaatctgataatttcat  14243900            --------->MYB52(1)         --------->ZAT2        --------->ANAC58        --------->ANAC46                                                                        <----        --------->ANAC58                                                             --------->LBD16    <------ZmHOX2a(2)                    ----------->GT1                         --------->ARR14(2) -    --------->CCA1(2)               --------->YAB1                   ----------->HVH21         ------   <---------ARR14(2)       ---------->DOF2          --------->AHL20(2)   ----------->GT1     <------ZmHOX2a(2)   --------->ARR14(2)       --------->MYB52(1)      --------->AHL20(2)   ----------->GT1     --------   --------->AGP1      ---------->DOF2---------->DOF2<---------AHL20(2)---------->DOF2     --------->MYB59   aaacagatccaagctaacaatttcacaaagtaaaggaatcaaaagctaaaaacatttaataaacaatcgaggtgaaagttaaaaatccccaattagatcc  14244000                                                                                                 ----                                                                                                 ----                                          --------->MYB52(1)                                     <---                                         --------->RVE1(1)                                       ----  --------->DAG2                 <---------HSFB2a(2)                                             <--- -----------AGL15                --------->HSFB2a(2)                                             <--- --------->DOF2                 <---------ANAC46                                       --------->ANAC58 ----------->AGL3         <---------TOE2(3) --------->TOE2(2)             <---------ANAC46  --------- ->AGP1                   <---------TOE1(3) --------->TOE1(2)         <-------GAMYB    --------->ANAC58   aaaaaaggcgaaattagatcgagagtttagggtttcgcgaaaaatacctgcgagggagaaattgaagctctgcgttgtgagtagagaagacggaaggaaa  14244100             <---------ANAC46                    <------ZmHOX2a(1)            <---------DEAR3(1)             ------>NtERF2           <-------TEIL                   <---------DEAR3(1)        <---------At4g35610              <---------LBD16        --------->At4g35610            ------>ZmHOX2a(2)       --------->MYB52(2)              =================HOX2a_HOX2a     <---------MYB52(1)    <---------ARR14(2)<---------ANAC46    <-----------HVH21     ====================HOX2a_HOX2a   --------->LBD16        ===================HOX2a_HOX2a <---------LBD16     <---------ANAC46 <------ZmHOX2a(2) ----->ARR14(2)   ----------->TGA1    ==================HOX2a_HOX2a ----->ARR11(3)   ----------->HVH21   <---------GLK1(1) --------ARR10  <---------MYB46(3)    --------->GLK1(1) ----->GLK1(2) <---------AtMYB61     <-----------ARR10                                      --------- ------ARR11(3)<---------DEAR3(1)    --------->ARR14(2)                                    ---------- ------ARR14(2)--------->ALFIN1      <---------ARR14(2)  --------->CCA1(2)       <----------DOF2 -->GT1----------->ARR10  <------ZmHOX2a(1)--------->LBD16          ----------->GT1  <---------AtLEC2   atctccggttagatgcggtggtgacggaggaatcgagccgatctccggcgaggagagagatttgggagagaggctaattggacctttggatgaaaaagca  14244200                                                                                                  ---                                                                                              <------                                                                                            ---------                                                                                            <--------                                                                                           --------->MYB111(1)                                                                                           --------->MYB52(2)                                                                                          <--------P                                                ------------>CBF                         <---------MYB52(1)                                               --------->YAB1                          <---------HSFB2a(2)                        --------->ICU4      <---------ICU4                             --------->HSFB2a(2)                        <---------YAB1      --------->YAB1        <---------MYB52(1)  <---------ANAC46                     <---------YAB1        --------->KAN4(1)     --------->At4g35610<---------ARR14(2) >DAG2             ----------->GT1         --------->ICU4 --------->MYB46(3)        --------->ARR14(2) >DOF2    --------->CCA1(2)    *TSS       <---------KAN4(2)   <---------ATHB12<---------ARR14(2)<----   gacaaggcgaagagataagttttgttattattcaagagacatggaataatcacaatgtcaacaaatcagttggctaagcgatttcggttcgggtagtttc  14244300                                                                 <---------At4g35610                                                              <---------At5g28300        ----------->GT1                               ------>ZmHOX2a(1)                             -      ---------->DOF2                                 <----------DOF2                               < ------>LBD16                                     --------->ARR14(2)                            ----- ---ARR14(2)                          <---------GLK1(2)      <-----------GT1       <----------DOF2--- >HSFC1(2)                         --------->LBD16<---------ARR14(2)    ----------->GT1        <----- -HSFC1(2)                        --------->ANAC46<---------ARR11(1) --------->MYB52(1)       <------ -----LBD16                       --------->LBD16<---------CCA1(2)  --------->MYB52(1)        -------   cggttaacaaaagttaattcgacccgattaagtcacccgagattgtctctcgtatccttttttttacagcaaaccggttaaatccctttgagaaacgatc  14244400           --------->AtLEC2 <---------ICU4 -------->ICU4                                                     --------->AHL20(1) ---------YAB1                                                     <---------AHL20(1) ->ZmHOX2a(2)                              <----------DOF2         <---------AHL20(2) ------>YAB1                       <----------DOF2                 --------->AHL20(2)   <-----------GT1 -ZmHOX2a(2)   --------->ANAC58 <---------ARR11(3)              --------->YAB1          <---------At5g28300 ---ARR11(3)   --------->ANAC58 --------->ARR11(3)            --------->AHL20(2)       <-----------GT1 -->ARR11(3)   --------->ANAC46<---------CCA1(2)            <----------DOF2         ------->TEIL   <-   tcataattctgaaatgcaaacaacaaatctcttaaatctttttttctttcatgtctcattctcttttaataaaatgtgtataaacgaatttaccccttct  14244500                                                                                <----------DOF2                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  --------->MYB52(1)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        ----------->GT1      ------>MYB46(1)                                                   <---------AHL20(2)        ------>MYB83                                                   --------->AHL20(1)      <---------MYB59                               <----------DOF2     --------->AHL20(2)     --------->ANAC58        <--           <-------TEIL--------->AHL20(2)         --------->AHL20(2)      --------->ANAC58      ----- ---------DOF2  --------->AHL20(2)     ------------------------>ANAC81  --------->GLK1(1)  ------>ZmHOX2a(1)   tctttctctaatattcattttaaaactaaataacttttaaaaaacaaaaaaaaaaaattagaaaaaaaaaacagaaacccaactttctctctcctctcct  14244600                                                                                --------->LBD16                                                                                ------>NtERF2                                                                               <---------DEAR3(1)                                                                              <---------LBD16                                                                    --------->ARR11(3)                                                                    <---------ARR11(1)                                                                    <-----------ARR10                                                                    --------->ARR14(2)                                                                    <---------ARR11(3)                                                                    <---------ARR14(2)                                                                   --------->GLK1(1)     <----------DOF2             --------->ANAC46                  <---------CCA1(2) --------DOF2         ---------->ID1                      <---------YAB1     ------>ZmHOX2a(1)  <---- ->ZmHOX2a(1)    <---------At4g35610                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)---------   ctttctcctttgaagtttgagctcgtcgctcttactcgccgaaattcgatttcagtagtcattgttggcatatcttctcctccggcgagttttgtcgaga  14244700  Previous    Next  AGI:  At3g42050.1    Description:  vacuolar ATP synthase subunit H family protein. Identical to Probable vacuolar proton pump subunit H [Arabidopsis Thaliana] (GB:Q9LX65); similar to Probable vacuolar proton pump subunit H (V-ATPase subunit H) (GB:Q84ZC0); similar to putative vacuolar ATPase subunit H [Mesembryanthemum crystallinum] (GB:CAD27445.1); similar to putative vacuolar ATPase subunit H protein [Suaeda maritima subsp. salsa] (GB:AAO65974.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain ATPase, V1 complex, subunit H; (InterPro:IPR004908); contains InterPro domain ATPase, V1 complex, subunit H, C-terminal; (InterPro:IPR011 Range:  from: 14239481    to: 14244231    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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