Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <------NtERF2  <-----------RAV1(1)                                --------->ATERF1(2)                                <---------ATERF1(2)       <---------ZAT6      <---------ANAC58                                --------->DEAR3(1)    <---------ANAC58        <---------ANAC58                                --------->RAP2.6(2)   <---------ANAC58    ---------->ID1                    --------->LBD16          --------->ZAT14            <-----------RAV1(1) ------>bZIP60(2)  <---------ANAC46          <---------ZAT14          <----------DOF2 -----ALFIN1      <---------LBD16------>NtERF2   <---------MYB46(3)  --------->TOE2(3) ----ZAT18       --------->MYB52(1)          --------->ZAT18       <---------ARR11(3) ->PCF2 <----------DOF2        <---------RAP2.6(2)<-------GAMYB    --------->ARR11(3)               -   acttcatagactttgctagtaccggataagtttgccgcctctcttggtggactgttgctagagttggaatacctttgttgtcttgcaatattaggctctc  14238900                                                                           <------ZmHOX2a(1)                                                                         --------->ALFIN1                                                                     --------->At4g35610                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<--                <---------ARR11(3)                ------>NtERF2--------->ATHB12<-----------ARR10 ----                --------->ARR11(3)             --------->At4g35610   <---------At4g35610      -------              ------->TEIL                     <---------ZAT2 <---------YAB1  <------ZmHOX2a(1)  <---           <---------YAB1                      <---------At4g35610   <---------LBD16       <---------AtMYB61 -------->AtMYB61             <---------ANAC46 --------->ZAT2 --------->ICU4--------->ALFIN1  <------   taccatacctgttatgaacatctctagttgtggcgaagtatggaattgcagctgccaattcttcatgattcagcggaggaggagctactcttggaggtgg  14239000       --------->At4g35610       <---------ZAT2                                         --------->ZAT6       --------->ZAT2                                        <---------ZAT14       <---------At4g35610                                   --------->ZAT18 ---------HVH21                                        ------>ZmHOX2a(2) ----->bZIP60(1)             --------->At4g35610      --------->At4g35610 -->ALFIN1                   <---------At4g35610      <---------At4g35610            xxxxxxxxxxxxxxxx ------bZIP60(1)             ----------->RAV1(2)     <---------ARR11(3)        <------NtERF2<xxxxxxxx ---AtMYB61              <-----------HVH21           <---------AGP1    <xxxxxxxxxxxxxxxxsmallRNA(s)   tgtcactggagctggaaacgaagtctcagtcatctgagactgagaattcaaacttgatctgagaacactatctctgaaggcagcccttgctcttgctatg  14239100                  ----------->GT1              <---------ARR14(2)                                                                    <            <---------YAB1                                                                          <           <---------TOE2(3)                        --------->ZAT2                                  <          <---------DOF5.7(2)                  <---------ARR14(2)                                 <xx         --------->WRKY12                      --------->ARR14(2)                               <----         --------->WRKY38(1)                 --------->LBD16                                   >>>>>>         --------->WRKY45                  <---------LBD16    <---------GLK1(2)                >>>>>>        --------->DOF5.7(2)   --------------->AGL15 --------->At4g35610                       -------    <------ZmHOX2a(1)         <---------------AGL15 <---------At4g35610       --------->YAB1 <------- xxxxxxx>smallRNA(se3)--------->YAB1    <---------ZAT14--------->At4g35610 <----------DOF2<---------AHL20(2) xxxxxxxxxxxxxsmallRNA(s2)   ----------------->AGL1 <---------ZAT2<----------DOF2        --------->AHL20(2)   ctgtgaggacgttgacgatagggataatagtccctgtttgagtaaaccggaaacagctgctacatattcttttgagcctttcatactgaaattttatgat  14239200      ------>NtERF2      <xxxxxxxxxxxxxxxxsmallRNA(i)      ----------->RAV1(1) ---------ANAC46 ---------ANAC58 ---------ANAC58          ------>ZmHOX2a(1) xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -----WOX13(1)          ------>ZmHOX2a(2) >>>ARR1              <---------ARR11(3) >>>ARR2              --------->ARR11(3)                               --------->ZAT6 -->ATHB12  --------->GLK1(2)        --------->TOE2(2)              <---------MYB52(1)        <------ --YAB1    <---------GLK1(2)        ----------->RAV1(2)         ------->TEIL              *TSS-------   tgtcgtgccaccagaatcgaagatgatcctttggaaaaacctgagtctgtctgtgataccaaaatgaacccttactctaatataggctatttgagtttaa  14239300       <---------ANAC55(2)       <------MYB83                                                       <-------TEIL       <------MYB46(1)                                                    <---------YAB1       <---------ANAC46                                          <----------DOF2      --------->MYB111(1)                                       <---------ANAC58      --------->MYB59                                           <---------ANAC58                 <---      --------->MYB46(2)                                   <---------ANAC46                      <---     <---------MYB55(1)                    --------->At4g35610 ---------->ID1                    <--- ---AHL20(2)                     <------------CBF          <---------ANAC58                      <--- -->AHL20(2)                    --------->ATHB12           <---------ANAC58 <------------CBF <-------   ttaagagttaggtatgagacttcatacatctaacttattggtatgagatgaaatttttgtgccttggctttttatgttcattgtcaagagtgtttctttg  14239400                                   <-----------GT1                              --------->YAB1                                           <xxxxxxxxxxxxx ------ANAC58                 <---------AHL20(2)                                      --------->YAB1 ------ANAC46                 --------->AHL20(2)    --------->GLK1(2)               ---------->DOF2 ------AtLEC2            ----------------->AGL3     <-----------ARR10             --------->YAB1 ------ANAC58        --------->MYB46(3)            <---------GLK1(2)           --------->WOX13(1) ---DOF2            --------->DEAR3(2)       --------->ETT(2)              ----------->GT1      -----   cttgtatttcagattagaccgaaacgacccatttatattaccagttgtcgagagaatctaattagacatggtaaccagagtaaatcaaaagtaatctcat  14239500                                                                                              -------                                                                                             <-------                                                                                            <--------                                --------->MYB52(1)                                        -----------                  --------->ANAC58                                                        <----------       <---------At4g35610     ------->GAMYB                                           <-----------GT1       --------->At4g35610    --------->MYB46(3)                               --------->ARR11(3) xxxxxsmallRNA(fl3)           <---------MYB52(2)                       <<<<<<<<<TBF1<----------DOF2 ---->At4g35610   --------->ANAC58                       ----------->RAV1(1)   <---------ARR11(3)   ctccatataagctgaaactctcgcatcatacaacaaactggcccaaatgtgtctgtctgcaacaatagcattcttcttcaaggtctcttttactctttat  14239600                                                                       --------->YAB1     --------->AHL20(2)          --------->ATHB12               <------ZmHOX2a(1)     <---------AHL20(2)          -------->ATHB1               --------->LBD16 --------->AHL20(2)              --------->ATHB51            <---------LBD16 -->ATHB12                      <---------YAB1          --------->GLK1(2)                       ----- --YAB1                         --------->ICU4         <---------ARR14(2)             <---------ANAC58 --DOF2                         <---------AHL20(2)     <---------GLK1(2)              <---------ANAC58 ---->AGL15                     <---------ATHB51       --------->ARR14(2)             <---------ANAC46 -----AGL15                --------->LBD16           ----------->ARR10<---------AHL20(2)       ------   tgaataaataaatacagaaaacacaaacccagaaattattgaagcatacaatagccagattctccaggataaataataaacagatgtgtcttggaatgtg  14239700                                                                                                    <                             --------->ALFIN1                                          <-------GAMYB-                    ------->MYC2                                ----------->GT1        <---------ANAC58          ---------->DOF2 <------ZmHOX2a(1)             ----------->GT1                <---------ANAC58     ---------->DOF2<-------MYC2                       ----------->GT1                <---------MYB46(3) ---->REM1(2)       ------->MYC3         <---------MYB52(1)  ---------->DOF2         <---------AtMYB61 --->ALFIN1         <-------MYC3   <---------ZAT2   <-----------RAV1(2)  --------->GLK1(2)        <--   tagaatcgaaagaaaagaagcatatgcaggagttgggagcacggtttgttttggacaggggaaaaaaggaaacacaatctgtgtgttttggttgcatttc  14239800  Previous    Next  AGI:  At3g42047.1    Description:  unknown pseudogene Range:  from: 14238665    to: 14239290    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g42050.1    Description:  vacuolar ATP synthase subunit H family protein. Identical to Probable vacuolar proton pump subunit H [Arabidopsis Thaliana] (GB:Q9LX65); similar to Probable vacuolar proton pump subunit H (V-ATPase subunit H) (GB:Q84ZC0); similar to putative vacuolar ATPase subunit H [Mesembryanthemum crystallinum] (GB:CAD27445.1); similar to putative vacuolar ATPase subunit H protein [Suaeda maritima subsp. salsa] (GB:AAO65974.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain ATPase, V1 complex, subunit H; (InterPro:IPR004908); contains InterPro domain ATPase, V1 complex, subunit H, C-terminal; (InterPro:IPR011 Range:  from: 14239481    to: 14244231    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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