Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <----------DOF2                                                                    <---------DAG2              -----                            <---------AHL20(2)                   <---------ALFIN1               <----                    <---------ANAC58                --------->ARR11(3)     --------->TOE1(3)    -----                    <---------ANAC46  <---------At4g35610     --------->ANAC58                 <-----                    <---------ANAC58  --------->At4g35610     --------->ANAC58        --------->ZAT14               <---------ANAC58     --------->MYB46(3)        --------->ANAC46        ---------->DOF2               <---------ANAC58   ----------->RAV1(1)    --------->ANAC46  --------->TOE2(3)   <-----        <-----------RAV1(2)<---------AHL20(2)       <---------ARR11(3)  <-----------GT1        ------ -----TEIL  <--------P     --------->AHL20(2)---------->DOF2<---------ALFIN1    ------->TEIL   <-----   tacattgtcttcaggtagcatgtcttgaattaaatccaacagctgatcaaagtagttcttcgacacaccacttttaaccttgaatctgtaaagtcccata  13969900        --------->TOE2(3) ---->ATHB12 -----ICU4 ---->ATHB51 ----ATHB51 ----YAB1                         <---------ZAT14                                        <----------DOF2 --->ICU4<----------DOF2         <<<<<<<<<<<<<<<<<LFY                            ------>ZmHOX2a(1) ----ATHB12                 --------->YAB1                                   --------->ARR14(2)   <--   attgctgaaacctttgtgtatttgatacaatcagagtacaatggagtttcaacttctcttaacttctgcctaaactcagtttcctctactgcttcatcgt  13970000            --------->ATHB12            <---------ICU4                                                                      -----           <---------YAB1                                                                    --------         --------->YAB1                                                                      <-------         <---------ICU4           <-----------HVH21            --------->ANAC58             <--------   <---------LBD16        <------MYB46(1)                      --------->ANAC58             --------- -------DEAR3(2)          <------MYB83               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------ZmHOX2a(1)   cgtttccctgatcatcattcgtctgatttggttcaccttcacccatagagaatgctgtcttaaacaagtcaaatgcctctgtttcatattgaggaccacc  13970100                                                                        --------->ZAT6 ---->DEAR3(1)                                   <-----------GT1        <-----------GT1 ->AtMYB61                                       <---------YAB1        <---------YAB1 --ALFIN1           <-----------GT1         <---------ZAT6         <---------DAG2            <------- -ABI4(2)         <-----------GT1           ----------->GT1   <---------ALFIN1<---------GLK1(2)   <-- >MYB46(3)    <----------DOF2      ----------->RAV1(1)     --------------->AtSPL8         <---------ARR11(3)   gtcttctgtagatgctcttttttcaccatgagtactccaacaagaagtgttatacttcttatccataccccttatcactagatgctcaacaatttctttg  13970200                             <---------ZAT14                                                      ---                             <---------REM1(2)                <---------ATHB12            <-------GAMYB                             --------->ZAT14                 <---------ARR14(2)          <-----------RAV1(1)                       --------->GLK1(2)                     --------->ARR14(2)          --------->MYB52(2) ---DOF2          <----------ID1                      <---------WOX13(1)                 <---------MYB46(3) -------WOX13(1)  <---------ETT(1)                   <---------GLK1(2)                ------------>MYB.PH3(2)   atagactgatggcataaattgcgacaatctctacacgggcatagcatttcagacagattgcccaatcttcttgctgatgaattggcgaagtttgttgctc  13970300                       *TSS                      <---------TOE2(2)                      <---------TOE1(2)                            <---------MYB52(1)                     ------>ZmHOX2a(1)                   <----------DOF2                    --------->TOE2(2)    <---------ARR11(3)      ----------->GT1         <---------ANAC46  --------------->AtSPL8  ----------->GT1--------->ARR11(3)------------>CBF     ---------->DOF2 --->ZmHOX2a(1)     --------->TOE1(2)---------->DOF2 <---------GLK1(1)    --------->At4g35610   cttctaagtactcaaaactattcctacgttgtaaatttgaaaagaacttagctagatttctttcaatcggttaataagctcagaaagaatttagtgtata  13970400                <-----------ARR10                <---------ARR11(3)                 <---------MYB52(1)                       ---------          --------->ARR14(2)                   <------ZmHOX2a(2)                           ----------         --------->GLK1(1)        <---------YAB1------>ZmHOX2a(2)            --------->At4g35610     --------->At4g35610     <------MYB83     --------->ARR14(2)    --------->TOE1(3)   --------->TOE1(3)     <---------At4g35610     <------MYB46(1)  <---------ARR14(2)    --------->TOE2(3)   --------->TOE2(3)     <------NtERF2        <---------MYB52(1)  ------->TEIL        ------->TEIL        ------->TEIL<--   ccttggcagcgaaatccacatcttatccatttggttacgatggagatggatccgttctgaaattgctgaaccctaaaacatctgaatgaaccctaaagcg  13970500                   --------->TOE1(3)           --------->MYB59                                   --------->LBD16        --------->GLK1(2)                                   --------->DEAR3(1)       <---------GLK1(2)                            <---------ANAC58                           <-----       <---------ARR11(3)                  <---------YAB1 <---------At5g28300                <-------     ----------->ARR10            <---------ANAC46  <---------ANAC58                 ------->TEIL --- >DAG2 --------->ARR11(3)         <---------ANAC58 ---------->ID1                   --------->MYB52(1) >DOF2<---------RVE1(1)           <---------ANAC58<-----------GT1                <---------------AtSPL3 -------ANAC46     --------->TOE2(3)   <---------ZAT14 <-----------HVH21    ---------->DOF2  --------   acttggagagattttggtaaaccctaaacacgagttgtgtgtgttctgattttttcgtttcaccgcgaaatcagacactaaagaatgaacggctcagatc  13970600                                                  <---------YAB1                                                 >>>>>>>>>>>>>>>>>LFY                                                 <<<<<<<<<<<<<<<<<LFY                                                <-----------GT1                                             --------->MYB52(2)              <---------At4g35610                                            <XXXXXXXXXXXXXXXXXXXXMIR169H-N   --------->At4g35610    -   ----------->GT1                         <--------P                --------->SPL7                <- -ZmHOX2a(2)          <---------REM1(1)  <---------MYB46(3)       --------->ANAC58                <-- --At4g35610      --------->SPL7        <---------TOE2(2)         --------->ANAC58               ---- ------->DOF2   --------->TOE1(2)       <---------TOE1(2)       --------->ZAT6 <------ZmHOX2a(2)----- ->At4g35610 ------->TEIL           <---------LBD16--------->ATHB12 --------->MYB52(1)     ----------   aaaagaagtgaaacgaatcgaacgatgtagattgcaatctcggaggttagtcaccattggctaataacacgaacggctcagatcaaaactagagtgacag  13970700                                       <---------At4g35610      --------->ETT(2)                 <---------ZAT2                         <---------ANAC58      <---------ETT(2)   --------->YAB1--------->At4g35610                    <---------ANAC58   =========================MYC_MYB  <---------DEAR3(1)                  --------->ALFIN1   ------->GAMYB  --------->TGA1a   --------->RAP2.6(3)      <---------ANAC55(2) -------->MYB52(1)--------->O2     ==================HOX2a_HOX2a   ----------->HVH21            ----- --------WRKY12   ========================bZIP_DOF           --------->ANAC55(2)              <------ ----ZmHOX2a(2)   <---------ANAC55(2)<---------RAP2.6(2)    <-------TEIL <---------ANAC46   <-------- ----->AGP1  --------->YAB1        <------ZmHOX2a(1)   <------NtERF2--------->MYB52(1)     <---------TOE1(2) ---->At4g35610   <---------O2 ---------->DOF2  ---------->DOF2 <-----------ARR10          <---------TOE2(2) ->HVH21  --------->TOE2(3) --------->YAB1    <------ZmHOX2a(2)<---------CCA1(2)       <---------LBD16   atcaacggtctacattaatcacgtctacaataagaaaggacggctgagatcaaagttggcgatacatatctaacggtgtggattgcaatctcggaggtta  13970800  Previous    Next  AGI:  At3g33148.1    Description:  transposable element gene. CACTA-like transposase family (Tnp2/En/Spm), has a 1.5e-165 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative; 12762-16371 (Arabidopsis thaliana) (CACTA-element) Range:  from: 13967600    to: 13970323    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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