Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <------NtERF2   ------>NtERF2  <---------DEAR3(1)     --------->LBD16            --------->At4g35610 -------ATHB12          --------->RAP2.6(2)         <---------At4g35610    <---------ANAC46<---------DOF5.7(2) -->MYB46(1)           <---------LBD16           <---------At4g35610    --------->ALFIN1--------->LBD16 -->MYB83        --------->YAB1                 <---------ATERF1(1)   <-----------RAV1(1) <---------ARR14(2) --->AtMYB61   ------>ZmHOX2a(1)               <------NtERF2          <---------bZIP60(2)<------NtERF2 -->MYB46(3)------>NtERF2----------->GT1      --------->LBD16         <---------REM1(1)<---------ANAC46 ->ANAC58 <---------ANAC58                  <---------LBD16        <-------TEIL       <---------LBD16 ->ANAC58 <---------ANAC58               ------>ZmHOX2a(1)        <--------P <------NtERF2--------->ARR14(2)   atcgtcggcattgcctccttcataagccggataatccacagtcctacgcggggctgcttcaaaccgaggttgatgtggcgcagattgaggcggaaacgtt  13747800                                                                                     <---------ZAT2                                                                                     <---------At4g35610                                                                                     --------->At4g35610                   <---------ZAT6                                             <------NtERF2            <------MYB46(1)                                               --------->REM1(2)            <------MYB83                                                --------->LBD16          <--------P                 <------ZmHOX2a(1)              <---------ARR14(2)        --------->HSFB2a(1)         --------->ICU4                  --------->ARR14(2)        <------MYB46(1)       ------->PIF5                 <---------YAB1--------->ALFIN1        <------MYB83          --------->LBD16           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <--        <---------HSFC1(2)    <-------PIF5          --------->TOE1(3)  <---------ANAC46        xxxxxx        <---------HSFB2a(1)  <---------ANAC46      ----------->RAV1(2) <---------O2  --------->ZAT2<-        --------->HSFC1(2)  <---------LBD16   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  ----------->RAV1(2)   tgtgtttggaaggttggagtagtctgaaaccccgtggaaggattagatggaaaacctgaagatgatggaagacccgtggaggcattcagctgaaaccctg  13747900             <---------ANAC58             <---------bZIP60(2)             <---------TGA1a             <---------O2 <---------ANAC46             <---------ANAC46             <---------ANAC58             =================bZIP_DOF          ----------->HVH21------>NtERF2                                   ----------->RAV1(2)-------          ----------->TGA1<---------O2      <---------At4g35610           ------>NtERF2      <-------        --------->YAB1 ----------->HVH21    --------->At4g35610          --------->ANAC46    <------- -------AtMYB61    ---------->DOF2          --------->ZAT2              --------->ATERF1(1)  <------- xxxxxxxxxxxxxxxx>smallRNA(i2)<---------SPL7<---------ZAT2             <---------ATERF1(1)  --------- --------MYB46(3)----------->HVH21      --------->ALFIN1         --------->ZAT14           <---------   gtggttctaatggtgacgagtgaaagcgacgcggttcgaagggtgaagctggaagtcgaggtatctctgaagtcgacgcctggtatcgcgactggtcaaa  13748000                                     <------NtERF2                                   <---------ANAC46                          --------->ATHB12                        <---------MYB52(1)                       <-------GAMYB--------->LBD16                                      <xxxxxxxxxxx --------->MYB52(1)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                   <---------ZAT14 --->DOF2      <---------ANAC58    <---------HSFB2a(2)       ------->TEIL             <---------ANAC46 --WRKY45      <---------ANAC58    --------->ATERF1(2)   --------------->AtSPL8       <---------REM1(1) --WRKY38(1)   --------->ALFIN1    --------->HSFB2a(2)   --------------->AtSPL3     <---------ANAC46 --WRKY12    --------->ALFIN1      --------->ETT(1)   --------->ZAT14        <------ZmHOX2a(1) >WRKY18(1)  <---------ANAC46     <---------LBD16     <---------ZAT14      <---------TOE2(3)     <--- --HVH21<------NtERF2 <---------ANAC46       <---------GLK1(2)        --------->ALFIN1--------->ALFIN1   gagtaagggccgagggtgtgtgtcccgttgatttgtgccggaaaacagagtctctctgttctgtacctccaagtgttgaggatgagaggtgtagactggt  13748100              ----------->GT1      --------->At4g35610      <---------ZAT2      --------->ZAT2      <---------At4g35610                            <---------ANAC46     --------->ARR14(2)                         <-----------RAV1(1)     <---------ARR14(2)                        <---------ARR11(3)    <------NtERF2                           <---------HSFB2a(2)   --------->LBD16                          --------->HSFB2a(2)  --------->DEAR3(1)               --------->MYB59 <---------ANAC46 <---------LBD16               xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxsmallRNA(si3)   ------>ZmHOX2a(1) --------->ARR11(3) ------DOF5.7(2)   --------->MYB52(1)    ------>ZmHOX2a(1)    *TSS   aacgccggagctggagaagaaaaacggactcctctattcggtccttccagatgttgtgggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn  13748200   nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn  13748300   nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn  13748400   nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn  13748500   nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn  13748600   nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn  13748700  Previous    Next  AGI:  At3g33076.1    Description:  transposable element gene. gypsy-like retrotransposon family, has a 4.2e-187 P-value blast match to GB:AAD22153 polyprotein (Gypsy_Ty3-element) (Sorghum bicolor) Range:  from: 13743444    to: 13748162    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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