Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ANAC58                                            --------->ANAC58                                            --------->ANAC46          <xxxxxxxxxxxxxxxxsmallRNA(i)    xxxxxxxxxxxxxxxx>smallRNA(i)                        -------    --------->TOE1(2)                 --------->ARR11(3)                                  -------->P    --------->TOE2(2)                 <---------ARR11(3)                                --------->MYB46(3) ----->ANAC46 <---------ANAC58       --------->CCA1(1)         <xxxxxxxxxxxxxxxsmallRNA(se3)  ------- ----->ANAC58 <---------ANAC46       --------->RVE1(1)     <---------GLK1(2)    ---------->DOF2 ----->ANAC58 <---------ANAC58 ----------->GT1          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------   agaaaacatgcgatttgcgagggaaatttgcaatggaaaatatccctcgcaaattgctacagaattgcaagacgtttgcgatgaaagagaacaacctcgc  13201900                                                                 --------->LBD16                                                                <---------AtLEC2                                                                <---------ANAC58                                                                <---------ANAC46   --------->ANAC58                                                                <---------ANAC55(1)--------->ANAC46                                                                <---------ANAC58   --------->ANAC58                                --------->ANAC58               <-----------------------TaNAC69(2)                                --------->ANAC58         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       --------->HSFB2a(1)               <------ZmHOX2a(1)        ------>ZmHOX2a(1)   <-----------HVH21  ------->TEIL                   <---------ANAC58       <---------ICU4 -->ANAC46          ------->GAMYB                    <---------ANAC58      --------->ICU4          <- -->ANAC58         --------->MYB46(3)                <---------ANAC46      <---------YAB1          -- -->ANAC58         <---------MYB52(2)<---------ARR14(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    xxxxx   tactccgtcgcaaaatttgcaacgaacatttctctcgcaaatttgtgagacgtttgcgaggaaattgcgtggaaaccatgattcctcgcaaaaacgtcgc  13202000                                                          --------->ANAC58                                                          --------->ANAC46                       <---                  <---------MYB52(2)                      --------->ANAC58                    <------                 --------->ANAC58                        ------>NtERF2                        <------           <-------GAMYB                                <---------ANAC46                  --------->GLK1(1)           --------->At4g35610                       ----------->HVH21                    <---------GLK1(1)          --------->ALFIN1                        <-------PIF5                           <---------GLK1(2)    <---------ANAC58                              ------->PIF5                           --------->ARR14(2)    <---------ANAC58      --------->GLK1(1)     ------->TEIL                             <---------ARR14(2)    <---------ANAC46--------->MYB52(1)         <---------ALFIN1                       <---------ANAC46 --------ARR14(2)--------->ANAC46            --------->ANAC58                      ----------->HVH21 ------->ARR14(2)--------->ANAC58     <---------ARR14(2)--------->DEAR3(1)        --------->HSFB2a(2) xxxxxxxxxxx>smallRNA(i)  <---------GLK1(1)  --------->ANAC58                     <---------HSFB2a(2)   aaatttgcgagggagttgcaagtaacagaaatctcttgcagattgcgacgcacttgcgacgcgcaactattctatagcaaatttcgcgacggatttgcga  13202100                                                          --------->GLK1(1)                                                          <---------GLK1(1)                                                         <---------GLK1(2)                                                         <---------ARR14(2)                                                   <------MYB83                                                  <---------MYB46(3)                                                  --------->MYB46(2)             ----------->HVH21                    --------->MYB55(2)           <---------ANAC55(2)                    --------->MYB59           --------->At4g35610                    --------->MYB111(1)           --------->ANAC55(2)                 <------MYB46(1)           <------MYB83                        <------MYB83           <------MYB46(1)                     <---------MYB46(3)           <---------At4g35610                --------->MYB111(2)          --------->MYB59                     <---------AtMYB61          --------->MYB52(2)                  --------->MYB55(2)          --------->MYB46(2)                  --------->MYB46(2)          <---------AtMYB61                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------MYB55(1)                   --------->MYB111(1)        <--------P                     ------>MYB46(1)   --------->ARR14(2)       <-----------HVH21               ------>MYB83<------MYB46(1)       <-------GAMYB                 <---------MYB46(2) <------ZmHOX2a(1)     --------->LBD16                 <---------MYB59 <--------P --------->ANAC46                    <     <---------TOE1(2)              --------->HSFB2a(2)<------MYB46(1)                              -    <---------ANAC46              <-----------GT1 --------->MYB111(2)                              <-   <---------LBD16       --------->AHL20(2)   <---------MYB46(3)--------->ANAC58          <---------- <---------REM1(2)       <---------AHL20(2)  <--------P<------MYB83                   <----------DOF2 --------ARR10          --------->AHL20(2)   <---------MYB55(1) --------->ANAC58      <---------DAG2- ---ANAC58--------->MYB111(1) --------->ARR11(3) <--------P   XXXXXXXXXXXXXXXXXXXX>MIR780.2        -- ---ANAC58--------->MYB111(2) <---------ARR11(3) <---------MYB55(1)       ------>ZmHOX2a(1)   ------>ZmHOX2a(1)   gtcttcgcgggttaggtgaccacattttaaattatcttaccgaactggttggtaggtaggattccctcgcaaattcctagcaaaaaaacttttttcctag  13202200                                      <---------AHL20(2)                                    <---------AHL20(2)                                   --------->ARR11(3)          <---------ANAC55(2)                                   <---------ARR11(3)          --------->ANAC55(2)                                   <---------AHL20(1)          --------->ANAC55(1)                                   --------->AHL20(1)          --------->ANAC58                                   <---------AHL20(2)       --------->TOE2(2)    <-----------HVH21              --------->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->ANAC46          --------->ANAC46       ----------->TBP ---------ARR14(2)           --------->ANAC58       --------->AHL20(2) -------->ARR14(2)           --------->ANAC58     --------------->AGL15         --------->YAB1 --------GLK1(1)        <---------ZAT18        --------->ARR11(3)   <---------ANAC46 -GT1                  --------->ARR14(2)      <---------ARR11(3) --------->MYB52(1)        --------- -------->GLK1(2)      <---------ARR14(2)     --------->GLK1(1)--------->ANAC46 <---------ICU4 ------->GLK1(1)      <---------At4g35610     <---------GLK1(1)--------->ANAC58<---------ATHB12   caaatccgtcgcaaacagtcttgcagttccctcgcaatatatttttggatatctataaatagcctacgtaacgtctaagaaatcataactcaaatcacaa  13202300                                                                 <---------ANAC58                                                                 <---------ANAC46                                                            <---------ANAC58                     --------->AHL20(1)                     <---------ANAC58                     <---------AHL20(1)                     <---------ANAC46                     --------->ARR11(3)               <---------YAB1                     <---------ARR11(3)              --------->AHL20(2)                   --------->AHL20(1)                <---------AHL20(2)                   --------->ARR11(3)                --------->AHL20(1)                   <---------ARR11(3)               --------->YAB1 --------->ALFIN1 <---------AHL20(2)<---------AHL20(1)       *TSS --------->YAB1  <---------ANAC58      --------->ANAC46 >YAB1          --------->AHL20(2)        <----------DOF2 --------->ARR11(3)       <-----------GT1   catttacttacaaacaaaaaaaatattttcaaaaaacaaaacttctttcaaaaattataatgtcttggggtggagaacatgaaatttacacattacgaag  13202400                     --------->ANAC58            --------->YAB1                     --------->ANAC46           <---------YAB1                     --------->ANAC58       ----------->GT1                   ---------->DOF2    <---------TGA1a                   =============================bZIP_DOF                  ------->TEIL      <xxxxxxxx                  <------ZmHOX2a(2)   --------->TGA1a                <---------ANAC46     ------->TEIL                 --------->ARR11(3)   --------->O2            <---------ZAT18          <---------MYB52(2)          --------->YAB1              <---------O2            --------->LBD16        --------->MYB52(1)         <<<<<<<<<ARR2                <---------bZIP60(1)   --------->ZAT14        <---------MYB52(2)         <---------YAB1               <---------ANAC46      <---------LBD16        --------->MYB46(3)         <---------ATHB12          ----------->TGA1<---------YAB1   <-------TEIL ----------->RAV1(1)         <<<<<<<<<ARR1             ----------->HVH21        --------->ZAT18     <----------ID1 --------------->AtSPL3          <---------bZIP60(2)        <---------ZAT14   --------->ANAC46 --------------->AtSPL8          --------->At4g35610      <---------DEAR3(1)  --------->ANAC58    <-- <---------------AtSPL8----------->HVH21   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC58    <--   ttggatgtacaatcatagagatcaagcgaccgatgaggtgacgagagagtattatgacggactgcgcagtttcatgtatcaagcgacaaacgaaccattt  13202500                                                                <---------TOE2(3)                                                              <---------AHL20(2)                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                   <---------AHL20(2)                                                  --------->ARR11(3)         ----------->GT1                          --------->AHL20(1)                          <------ZmHOX2a(1)        --------------->AtSPL3                    <---------ARR11(3)                   --------->YAB1        --------------->AtSPL8<---------ANAC58    <---------AHL20(1)                  <---------YAB1 xxxxxxxxxxxxxxxsmallRNA(s2)  <---------ANAC46   --------->CCA1(2)                <----------DOF2 -------ANAC58                <---------ANAC58  <---------ARR11(3)           <---------HSFC1(2) -------ANAC58    --------->GLK1(2)             --------->ARR11(3)           --------->HSFC1(2)   gctcgtgagaacggtacaatattctgtccatgtcgtaagtgactcaatgagatatatttggaatttaatgtagtcaagaagcatctttataatagaggat  13202600                                      <---------REM1(1)                                      <---------MYB46(3)                                    <-------GAMYB                         --------->TGA2(2)                                                          <                        <-----------TGA1                                                 xxxxxxxxxxxx                        <-----------HVH21                                                ----------->GT1                       --------->ANAC58                                              -------->P     -                       <---------ANAC58                                           <xxxxxxxxxxxxxxxxxx                       --------->ANAC58                                          --------->ANAC58 ---                       --------->ANAC55(2)                                       --------->ANAC58<---                       <---------ANAC55(2)                                     <---------ANAC46 <----                       <---------ANAC58                                       <------NtERF2     -----                       --------->TGA2(1)                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       <---------TGA2(1)                              <---------ATHB51   xxxxxxxxxxxx                       <---------bZIP60(1)       <---------ANAC46    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       --------->bZIP60(1) <---------ZAT6  ----------->GT1  <---------ANAC46   ------   ttatgtcaaactactatgtctggttacgtcatggagagggttgtagagatagcgcataaactagtaatacaaattatggtgtcgagcaacctagtaattt  13202700    -------->HAHB4   --------->ICU4   <---------YAB1 --------->YAB1 <---------ICU4 -------->HAHB4 ---------ATHB51                                                                          ------->TEIL xxxxxxxxxxx>smallRNA(fl3)                                                              <-------TEIL -------->ICU4                                                                       --------->At4g35610 xxxxxsmallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxx ------>YAB1                                                           --------------->AGL15 ------YAB1  <---------ICU4                               <------ZmHOX2a(1)  <---------TOE2(3) -----AHL20(2)    <xxxxxxxxxxxxxxxxsmallRNA(s)     --------->ICU4      <---------------AGL15 ---->AHL20(2) <---------YAB1             <---------YAB1 ----------->GT1     <---------YAB1 xxxxxxxxxxx>smallRNA(si3)   <---------MYB59      <---------KAN4(2)   <-----------------AGL3       -- --->YAB1    --------->YAB1------->TEIL<---------YAB1  --------->YAB1 --------->YAB1 <---------At4g35610   taataatgatgcgaattatggtcagcatgtacctgatcaatttgattatgggcataatcaggaaaatagatttcataatatggttacagatgcatttcat  13202800  Previous    Next  AGI:  At3g32226.1    Description:  transposable element gene. CACTA-like transposase family (Tnp2/En/Spm), has a 5.2e-146 P-value blast match to GB:CAA40555 TNP2 (CACTA-element) (Antirrhinum majus) Range:  from: 13202344    to: 13206065    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version