Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                                                                  <--            <---------GLK1(2)                                                                     <--            --------->ARR11(3)         --------->AHL20(2)                                        <---            <---------ARR11(3)       ----------->GT1<---------ANAC58                            <----     --------->AHL20(2)    --------->CCA1(2)  <---------YAB1                                    <---- ----->TOE1(2)         --------->YAB1<---------ANAC55(2)   ------->TEIL      <---------ALFIN1   ----- ->TEIL    <---------RVE1(1)   <---------TOE2(3)    <---------ANAC58        --------->ZAT18     -----   ctagaaatttaagagattttctcaattagatttgagattaagtaaattgtgtttgggtatgcacattgaaagtttatgcacactgcctgtgttgaataga  13137400 -------------->AGL3 --->ZmHOX2a(2) ---------------AGL3 ---------------AGL2                                                                   <------ZmHOX2a(1) ---ZmHOX2a(2)                                                                       >>>>>>>GRF7 -----ARR11(3)                     --------->YAB1                                 <-----------HVH21 -----AGP1                    ------->GAMYB                                    <---------ANAC58 ---->ARR11(3)              --------->At4g35610                                <---------ANAC58 ---->AGP1                --------->MYB46(3)            ------->TEIL         --------->ARR11(3)   tctataaatgggtgagaaatggattacaacaactgaatcatagtgaattgtagttttgaacccgaacaattcaatttgagttcttgtcaggaaatacaac  13137500                                                                                 ------->TEIL                                                                             ------->MYC3                      <---------YAB1   <---------AHL20(1)                 <---------ALFIN1                     <-------MYC3      --------->AHL20(1)              --------->PCF2  <---------AtLEC2         --------->ZAT14       ------->GAMYB                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         --------->REM1(2)   --------->At4g35610          <---------CCA1(2)  <-------MYC3         <---------ZAT14     <---------At4g35610 <---------ZAT6       <---------WRKY18(1)----------->HVH21   <---------AGP1    ------->MYC3     --------->AHL20(2)--------->ANAC46  ----------->RAV1(1)      --   tagtagaactgtgtagaattgcacatgattcaactgaaaaatatatatgtagtattactcgtagctctagtttgacccacatgtatgtagcatgacatag  13137600                                                                             <---------YAB1                                                                        <---------MYB46(3)                 --------->AHL20(2)                                 --------->ATHB51          -------          <-----------GT1         <---------TOE2(3)                 --------->ATHB12         <-------          <<<<<<<<<GT-1           --------->MYB59                   -------->ATHB1           --------      <---------ZAT6      <---------ZAT6                           <---------YAB1    <---------YAB1 ------->ZAT18   <---------AHL20(2)   <-------TEIL               <---------ZAT6    <---------ZAT6   ttgcactagtattaaccatttatatgtagtattacttaggtacagtagcaatacccatttacatgtagtattattggttatactagtattatacagatat  13137700                                <------------CBF                  <---------ANAC46      <-----------GT1          <---------GLK1(2)       --------->MYB52(1)                   <--------      --------->ZAT6        --------->ANAC46          ------->GAMYB                  ------------>CBF -->CCA1(2)                --------------->AGL15      ----------->HVH21    <-----------TBP  *TSS  --- --ARR14(2)          <---------ZAT6             --------->YAB1    <---------ANAC58  --------->CCA1(2) ->ARR14(2)    <---------YAB1--------->LBD16  ----------->GT1     <---------ANAC58<------ZmHOX2a(1)   gtgtaatatcactagttattcttgtgttacccagaattgtagtataactagtataactgacagagttttcgtgttgtttttgtaggatacaatggtggag  13137800                                                                                                   --                                                                                                   --                                                                                                 <---                         --------->ARR11(3)                                                  --------                         <---------ARR11(3)                                                 <--------              <---------AHL20(2)                                                            ---------              <---------YAB1                                                               <------ZmHOX2a(1)             --------->AHL20(2)                                                           <------MYB46(1)             <---------AHL20(2)                        <-----------RAV1(2)                -----------         <---------AHL20(2)                   <---------YAB1                              <------MYB83    <---------YAB1   ---------->DOF2       <---------YAB1          <-----------GT1      <--------P -- -ANAC46<---------AHL20(1)<------ZmHOX2a(2)--------->ICU4   ----------->GT1            --------->TOE1(2) ------>GLK1(2)--------->ATHB12     <-----------GT1  <-----------HVH21           xxxxxxxxxxxxxxxxxxxx   aatgtgatcatatattttaattggaaagatcaagcgtataacttgatgatgaatacatcagggggaaaataactctctccatattagaaggtaggatttg  13137900   --------->HSFC1(2)   <---------HSFC1(2)  ------->TEIL ------->ANAC46 ------->ANAC58 ------AtLEC2              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  --- ->GLK1(1)              ----------->GT1                                                   --------->ICU4 -ARR14(2)             <---------TOE2(3)                              ---------->DOF2     <---------YAB1 >ARR14(2)             --------->MYB59                  <---------REM1(1)               --------->YAB1 >ARR10      --------->At4g35610                 --------->ZAT14    <---------MYB52(2) <---------ZAT6 ------->ANAC58        <---------TOE1(3)         <---------ZAT14   ------>MYB46(1)--------->TOE2(3) < >smallRNA(se3)  ---------->DOF2        <---------------AtSPL8     ------>MYB83<-----------GT1    <--   cacgaagcttagattagatgaaagtaaggttaaattgcaaatgaagtacaatgcagtgatgttgggaccaactaaagagatttacattagtgatgatgaa  13138000                                                         <-----------TGA1                                                        <---------O2                                                       <-----------STF1                                                       ----------->STF1                                                     --------->WRKY12                                                  <---------MYB46(3)                                                 >>>>>>>>>>>>WRKY18                                              --------->WRKY38(1)                                              ----------->HVH21                                              --------->WRKY12    --------->ZAT14                                        --------->ARR11(3)        <---------ZAT14                                        <---------ARR11(3)--------->TGA2(2)                                       <---------GLK1(1)--------->O2                                 --------->MYB52(2)<-------GAMYB--------->ANAC58                                xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ZAT18                               <--------P   <----------DOF2     --------->ANAC58                             ----------->GT1------>ZmHOX2a(1)   --------->ANAC46           <---------ETT(2)                     ----------->GT1   --------->GLK1(1)--------->TGA2(1)                  --------->ETT(2)                  <---------MYB52(1)  --------->ARR14(2)<---------bZIP60(1)          <---------ARR14(2) ------>ARR11(3)  ------>ZmHOX2a(1)   <---------ARR14(2)<---------TGA2(1)            --------->ARR14(2) -----------HVH21--------->TOE2(3)    <---------ARR11(3)--------->ANAC46        --------->LBD16  ---- -------ARR11(3) --------->TOE1(3)    --------->ARR11(3)--------->bZIP60(1)    <---------HSFB2a(2)  <   gatgtcagtgtctatatatccttaggtgaaatggttagtagatatcctttgactgttgacgtcatcactccactagaattgcccgaagaactgtcgagag  13138100                      <---------ZAT6                                                 --------->ATHB12            ---------->DOF2                                                       <---------ANAC58           --------->YAB1                                                         <---------ANAC46      ------>ZmHOX2a(1)                        <-------TEIL                       <---------ANAC58 ----->ALFIN1     <---------AHL20(2) <---------YAB1 <---------ATHB12         <---------At4g35610 ---------AtMYB61 <---------YAB1   <---------At4g35610               --------->ARR11(3)   tggaggtcctcaataaaagttttattgttaagaactatgctgatttgggttcaaatgaagatgaaataagagataatgctgctagcgtgatgggcgaatt  13138200                                                                             <-------MYC3                                                                             ------->MYC3                                                <---------YAB1              --------->O2                                             <-------TEIL                   <---------O2                                            <--------P                      --------->TGA1a                                            ==========================================MYC_MYB                                           <-------GAMYB                    --------->ANAC55(2)                                           ===========================================MYC_MYB                                          <---------MYB46(3)                <---------ANAC46                                         <---------TOE2(3)                  --------->ANAC46                                    <--------ATHB1           --------->At4g35610                                    --------->YAB1          --------->MYB52(1)   <---------YAB1      --------->ANAC58              <---------ICU4       --------->ANAC58   <---------ANAC55(2)      --------->ANAC46             <---------ATHB51      --------->ANAC58   <---------TGA1a      --------->ANAC58             <---------ATHB12      --------->ANAC46<------ZmHOX2a(2)<---------YAB1 <------ZmHOX2a(1)                 --------->ICU4--------->YAB1  <---------TOE2(3)  ------->TEIL   --   ggaggaacaaggaacagaacaaaatgaggcaatggcaataatggaggttgatgatactcaagcaactgagattggatcacgtgatgaatgtgatgataga  13138300  Previous    Next  AGI:  At3g32135.1    Description:  transposable element gene. Mutator-like transposase family, has a 7.4e-59 P-value blast match to O80466 /172-336 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 13137792    to: 13140140    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version