Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ---------->DOF2                        <---------At4g35610                     <---------AHL20(2)            -------                        --------->At4g35610                  --------->YAB1                  <------- --->YAB1           --------->ANAC58              <----------DOF2                           --------- ---YAB1            --------->ANAC58           ------>ZmHOX2a(1)--------->AHL20(2)          <-------- ->AHL20(2)        --------->WOX13(1)   ---------->DOF2   --------->WOX13(1)               --------->RVE1(1) >YAB1           --------->WRKY18(1)  <---------YAB1     <-------TEIL                      --------->CCA1(1)   tcagtcttcaaactcatgagtcaagcagctaaagagaattgtgaaagtccttctttacatccatcataaattggatgttttgtagcctccaaaatatcat  13001000                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                               ------                                                                                              -------                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                             >>>>>>>>>>>>>>>>>LFY <--                                                                       <---------At4g35610    <------  <---------DAG2                                                       --------->At4g35610    <------  <----------DOF2                                      ----------->GT1 ----------->RAV1(2)    ------- -->YAB1               <-------TEIL              ------>ZmHOX2a(1)    ------->TEIL           <------ZmHOX2a(1) --YAB1             <------MYB83               ----------->RAV1(2) --------->ANAC58    <---------ANAC55(2) >ARR11(3)          <------MYB46(1)          <---------ARR14(2)    --------->ANAC58    --------->ANAC55(2) -ARR11(3)         --------->MYB59           --------->ARR14(2)    --------->ANAC46<-----------HVH21-   aaaacttttttgcatcagcattaggttcttcatccatgttttgatcaaatcctgactctgtaaaatcaaacgcatctgaaaccattgtcacataaggatt  13001100          ----------->HVH21       --------->LBD16      <---------ANAC46      <---------ANAC58                                                                         ------      <---------ANAC58                                                                         ------ ------>NtERF2                                                                                 <----- <---------ATERF1(1)                                                                           <----- -------->WRKY12                                                                               <----- -------->WRKY38(1)                                                                            <----- ------>At4g35610                                                                              ------ --->ARR14(1)                                                                                 ------- -->ARR14(2)                                -------->ATHB1<---------YAB1                      <------ xxxxsmallRNA(si3)                          <---------ICU4<---------AHL20(2)                  ------- -------At4g35610                           --------->ATHB51  --------->YAB1                  <------ ---GLK1(2)                                 --------->ATHB12 <---------YAB1              --------->ANAC58 ---ARR14(2)                               <---------YAB1--------->YAB1                  --------->ANAC58 -->ARR11(1)                               --------->ICU4--------->AHL20(2)      <---------GLK1(1) ---------->HVH21                  --------->ETT(2)      <---------AHL20(1)      --------->GLK1(1)   cgctgactccgtgtgacacttagacacaaaaacatgttcgacagaattattgtctgcaatattattgtaatcttctccatgagaaatccaaacccaataa  13001200                                                                                                    -                                                                                                    <                                                                                                  ---                                                                                                 ---- --->YAB1                                                                                       <---- --->ATHB12                                 <---------YAB1                                     <----- ---ATHB1                         --------->ANAC58                                            <------ -------ATHB5                   <---------ALFIN1                                             <------- ----ICU4                    --------->bZIP60(2)                                          --------->AHL20(1) ---HAHB4           <---------AHL20(2)      ----------->HVH21                             <---------AHL20(1) --->ATHB51         --------->AHL20(2)    ------>ZmHOX2a(1)                               <---------ARR11(3) -->ICU4         <---------AHL20(2)       <---------At4g35610                             --------->ARR11(3) ---ATHB51      --------->YAB1 <---------REM1(2)     <---------TOE2(3)                  <---------AHL20(1) -->AHL20(2)    --------->AHL20(2)--------->ANAC58   <---------TOE1(3)                  --------->AHL20(1) ---ATHB12--------->TOE2(3)  ----------->HVH21     ---------->DOF2                      <---------ARR11(3)   ttagacataaaacctctattatataaatgcctcgacacggtctcctctgatagtaaaggttttccattcttgcatttgaaacatggacaaaatattttcc  13001300       <---------ARR11(3)       --------->ARR11(3)    <---------HSFB2a(2)    --------->HSFB2a(2)                                                              --------->LBD16 -------->ARR14(2)                                                                  <---------ANAC55(2) ---------ARR14(2)                                                                  --------->ANAC55(2) ------>LBD16                                     --------->ATHB12                  <---------ANAC46 ----->LBD16     <-------TEIL               <-----------GT1                        <---------LBD16 -----LBD16     <--------P                 <-----------GT1                       --------->ARR14(2) ----LBD16   <---------TOE2(3)        <---------AHL20(2)                    --------->TOE2(3)   <---- -----GT1  ---------->DOF2           --------->AHL20(2)         <----------DOF2  <---------ARR14(2) ----GT1--------->CCA1(2) <---------At4g35610    <---------ATHB12         <-------TEIL   <------ZmHOX2a(2)   cggtttcgagatataaaggttgattcttagctaatctcataaaattttccaatccttggcaaaattcttttgatggtacattagttccgcgatcaactct  13001400                                        ------>NtERF2                               ------>ZmHOX2a(2)                                        ----------->RAV1(1)                         --------->YAB1                                <---------ICU4                                    >>>>>>>>>ARR1                               <---------YAB1                --------->CCA1(2)    >>>>>>>>>ARR2                               --------->ICU4          --------->TOE1(3)         <------ZmHOX2a(1)                             --------->YAB1      <---------ICU4           ------->TEIL       <---------ALFIN1     <---------YAB1      *TSS<-----------GT1--------->AHL20(2)              <-      --------->MYB46(3)   <---------ARR11(3) <---------AHL20(2)   <---------AHL20(2)          ------  <-------TEIL             --------->ARR11(3)--------->AHL20(2)----------->TBP <---------TOE1(2)<---- ------DOF2         <---------ZAT6     --------->ANAC46--------->TOE2(3) <---------CCA1(2)--------->YAB1   ttgatacatccaccttcttgtagtataaatatcattattcgacgacattaattttgaccttagatataaaaaaatgtatcttaggatcgtaatcaaattt  13001500            <---------YAB1          <---------ICU4         --------->ICU4      --------->AHL20(1)      <---------AHL20(2)        ----------->GT1      <---------AHL20(1)   --------->AHL20(1)                  --------->ANAC58      --------->AHL20(2)   <---------AHL20(2)                  --------->ANAC58 <---------HSFB2a(2)     <---------ATHB12 --------->AHL20(1)                       --------->ANAC46 --------->HSFB2a(2)   --------->WOX13(1) <---------AHL20(2)                      <---------LBD16   <---------HSFC1(1) ------------>CBF     --------->AHL20(2)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----------GT1   <---------AHL20(2)                    ------>ZmHOX2a(2)        --------->HSFC1(1)<-- --->AHL20(2)<---------ZAT6--------->AHL20(2)     ----------------------->TaNAC69(2)              <-- -----AHL20(2)   --------->AHL20(2)      --------->ALFIN1------>ZmHOX2a(1)----------->GT1     ------>NtERF2   tataccaattaattagtattaaaataaaataaaatagtaaaatgtgtgtgaagttgatcctatctacggcacaatatggtttctagaagttatctctgcc  13001600                                                               ------------------------>ANAC81                                                     <---------ANAC58                                                     <---------ANAC58                                                   --------->ARR14(3)                                                   <-----------ARR10                                                   --------->ARR11(3)                                                   <---------ARR14(3)                                                   <---------ARR14(2)               -------->P                          <---------ARR11(3)               ------>MYB46(1)                     --------->ARR14(2)               ------>MYB83                        --------->AHL20(1)            --------->MYB46(3)           <---------ZAT18    ------>ZmHOX2a(1)            <---------MYB55(2)           --------->ZAT14    --------->HSFB2a(2)           --------->ANAC58              --------->ZAT18    <---------HSFB2a(2)           --------->ANAC58            --------------->AtSPL8 ---------->DOF2     ----------->GT1           --------->ANAC46<---------YAB1<---------ZAT14    <---------HSFC1(1)   --------->DAG2 --------DOF2------->GAMYB <----------DOF2         <---------AHL20(1)      ---------->DOF2 -------DAG2<---------MYB52(2)        <---------ANAC46      --------->HSFC1(1)  ---------->DOF2   ctttatcacttacaaccaacttgatagtgatttttggattttgtgtactacaatatcttgtcctagaagcacaaaacaaaagaaaagtagaaaactactg  13001700                         --------->ANAC46                         --------->ANAC58          <---------ANAC58                         --------->ANAC58          <---------ANAC58                   --------->WRKY38(1)             <---------ANAC55(1)                   --------->WRKY12                <---------ANAC46                                 <               <---------YAB1                --------->ICU4                                      ----             --------->YAB1  <------ZmHOX2a(2)<---------ICU4                                     <---   <---------TOE1(2)    <---------LBD16    ---------->DOF2  ---------->DOF2                    <-----   tttcgaatgttttaatcacaattgaccacggatcacaaaacaaaataaagattacttgtatgaaaagaaacttacttcccttgtgaaatttgtttcggtt  13001800                                                                            <---------AHL20(2)                                                                         <---------AHL20(1)                                                                         --------->AHL20(1)                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)            ------>ZmHOX2a(2)                               --------->ARR11(3)     <-------TEIL          --------->ARR11(3)                    <----------DOF2     --------->AHL20(2)          <---------ARR11(3)               <----------DOF2  <---------AGP1  --------->AHL20(2) -----------GT1                         <---------ARR11(3)  <---------ARR14(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->MYB52(2)                         --------->ARR11(3)  <---------ARR11(3)--------->AHL20(2) ------MYB46(3)  <---------At4g35610   <---------CCA1(2)    --------->AGP1--------->AHL20(2) ----MYB52(1)<----------DOF2           <---------GLK1(1)    --------->ARR14(2)<---------AHL20(2)   tgttacgctctcgatctttagctaatagctatagtctattgatatcttttcttttgtttatagatcttgatataatatatatatatacatggtcagtcta  13001900  Previous    Next  AGI:  At3g32021.1    Description:  transposable element gene. CACTA-like transposase family (En/Spm), has a 1.8e-154 P-value blast match to GB:AAA66266 unknown protein ORF1 transposable element En-1 (CACTA-element) (Zea mays) Range:  from: 12997431    to: 13001448    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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