Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <------NtERF2                                      ------>NtERF2                                      <---------ATERF1(1)                                     --------->RAP2.6(2)                                     --------->ATERF1(2)                                     <---------ATERF1(2)                                     --------->DEAR3(1)                                    --------->RAP2.6(3)                                    --------->SPL7                                    --------->ATERF1(1)                                   <---------ATERF1(1)                                              -                                  <---------SPL7                                              -------                              --------->MYB52(1)                                            <--------                       <---------HSFB2a(2)                                                 --------->LBD16                     ----------->RAV1(2)                                      <-----------GT1 xxxxxxx                <-----------GT1  ------->GAMYB                            --------->ATHB12<---------HSFB2a(2)            --------->ARR11(3)--------->ARR14(2)                     ------->GAMYB        --------->HSFB2a(2)            <---------ARR11(3)<---------ARR14(2)               --------->HSFB2a(2)  <---------ARR11(3)          ----------->ARR10 ---------->TaMYB80            <----------DOF2<---------YAB1  <---------LBD16     --------->MYB52(1)--------->HSFB2a(2)      <------ZmHOX2a(1)   --------->MYB46(3) <---------SPL7   tacaatggaacggagattttgccttctgggcataaccggccggccaaacaggatgaagcggttttctgcaaccgcatgattcacaatgtcttccggtaga  12799000                                                                            <---------MYB46(3)                                                                            <------MYB46(1)                                                                            <------MYB83                                           --------->MYB52(1)               ----------->GT1                                          --------->ANAC58                 --------->MYB46(2)                                          --------->ANAC58                 <---------AtMYB61                                          ----------->HVH21                --------->MYB111(1)                                          --------->ANAC46                 --------->MYB111(2)                                         --------->SPL7                    --------->MYB59                               <---------ANAC46                            <---------MYB46(3)                     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <---------MYB55(1) --------->DOF2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  <--------P   ---------->DOF2 --->DOF2        ------->GAMYB <---------ANAC58                        <---------TOE2(3)--------->DAG2 -MYB52(1)     --------->At4g35610   --------->MYB46(3)          <---------YAB1     --------->YAB1 <- xxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ANAC58            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---   gcaaaaggaatgtcatcaactcccaaattgatgtcttgaaccgcacgacggagattgtctgccatttgtgatagaggttggtagaatcgtaaagggaagt  12799100                                   XXXXXXXXXXXXXXXXXXXX>MIR832-5P                                  <---------HSFB2a(2)               <---------ANAC58                                  --------->HSFB2a(2)               ----------->RAV1(2)                               --------->GLK1(2)                    <---------ANAC46                              --------->ARR14(2)               --------->HSFB2a(1)                              <---------ARR14(2)     <----------DOF2<---------ANAC58                              <---------GLK1(2)      --------->TOE2(3)----------->HVH21 --------ANAC46     ----------->ARR10   ----------->GT1        <---------HSFB2a(1)                  < ------MYB46(3) --------->CCA1(2)<---------LBD16    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         ---   ggtttggaggtttaagagagatgagatttgtggattctgggattgtaaatcgaaactttaatagaacgttgcctgaagccgaagaagtagcatcacgatg  12799200                                        <------NtERF2                                        --------->At5g28300                                       ----------->GT1                                       <---------MYB46(3)                                      <---------DEAR3(1)                                     <---------ABI4(1)                                   --------->ZAT18                                  --------->ATERF1(1)                             <-----------HVH21                         -------->P<---------DEAR3(1)                             <-----------TGA1                         --------->MYB52(1)                         --------->GLK1(1)               --------->REM1(2)  --------->ALFIN1                  <---------ARR14(2)              --------->ALFIN1  --------->ALFIN1                    --------->ARR14(2)       --------            <---------ANAC46 xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ------     <---------ARR14(2)<---------MYB111(1)               <---------DAG2          --------->ANAC46  -- ---------ANAC46       --------->MYB46(3)            <---------ZAT18<---------GLK1(1)    --------->MYB52(1) ---->TEIL  --------->DEAR3(1)<XXXXXXXXXXXXXXXXXXXXMIR408<----------DOF2<---------ANAC46---------->DOF2   aatcgtggattccaccgtggagataactaccagggagtgggcggtgaagaaacagaccactttcccagcgaattccctgtaaaccgtcaccaaaggggtg  12799300                                            --------->DEAR3(1)                             ------>ZmHOX2a(2)      <---------O2                     --------->ETT(2)      <------NtERF2                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     <---------ETT(2)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                     ----------->HVH21    ------>NtERF2                  ------->GAMYB <----------DOF2 <-----------TGA1       <---------GLK1(2)                 --------->DEAR3(2)      <---------ETT(2)   <---------MYB52(2)                 --------->MYB46(3)      --------->ETT(2)  --------->At4g35610                 <------------AtMYB77   ---------->ID1     <---------At4g35610                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) --------->O2       <------------CBF                <---------At5g28300   <-----------RAV1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->DAG2   <------ZmHOX2a(2)   <-----------HVH21  ---------->DOF2<---------AHL20(2)       ----------->GT1     <---------ARR14(2)  --------->YAB1------->GAMYB     <------------CBF --->GT1  ---------->DOF2  --------->ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ----->HVH21   <-----------GT1  <---------DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <------------CBF -------->DOF2 --------->MYB52(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ZAT6   acaaagagatagtaaagtaaccgtcgacagatcgccttatctgtcgccatcgtcatgtcgcaactcaccaaaagattgtgttattgaattgtattcatat  12799400                                                                        ---------->DOF2                                                                        <---------AHL20(2)                                                                   --------->AHL20(2)                <---------ARR11(3)                              --------->YAB1                --------->ARR11(3)                             <---------YAB1                --------->GLK1(2)                           <---------AHL20(1)          <---------WOX13(1)                                --------->AHL20(2)         <------------CBF                                   --------->AHL20(1)       <---------AHL20(2)                                   <---------AHL20(2)       <---------YAB1                                    --------->AHL20(1)      --------->AHL20(2)                                --------->AHL20(2)      <---------AHL20(2)                                <---------AHL20(2)    <---------YAB1 <----------DOF2                     --------->ICU4  <---------AHL20(2)   --------->AHL20(1)                              <------ZmHOX2a(1)   --------->AHL20(2)  <---------AHL20(2)                             <---------TOE2(3) <---------AHL20(2)   <---------ARR11(3)  --------->ATHB51 --------->TOE2(3)             <---------TOE1(3)<---------YAB1        --------->ARR11(3)  --------->AHL20(2)                 --------->AHL20(2)<---------AHL20(2)           <---------ICU4  -   agaattattttaattgaaaatctttaatacatttacaaaaaaaatagttttaaggaaattattttattataaattaaatcgcataagaattatcttggta  12799500                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                  --------->AHL20(2)           <-----                                                                  <---------AHL20(2)           <-----                                                               ----------->GT1                 <-----                                                          ---------->DOF2                     -------                             ================================HOX2a_HOX2a                 --------->AHL20(2)                             <------ZmHOX2a(1)        <------ZmHOX2a(2)                  <---------AHL20(2)      ---------->ID1 <---------YAB1                 --------->At4g35610     <-----------GT1   ------- -------->ZAT6  <---------ZAT6      ------------>CBF<---------At4g35610   <---------AHL20(2)  -------   taacacttgtctcatctagtattatgttataggaaaatatcaatagctatactcagatcacaaagtagttaaatatttatacatgttttttttaattagg  12799600                                                    ------>MYB83                                                  <---------MYB59                                                  <---------MYB111(1)      --------->ARR11(3)     ---------->DOF2                             --------->ANAC55(1)       <---------ARR11(3) -MYB83                                          --------->ANAC46          <---------ARR11(1) ----ANAC46                             <----------DOF2                   <---------CCA1(2) -MYB46(1)                   <---------YAB1      --------->ANAC58       --------->YAB1 -->MYB59  <------------CBF <---------AHL20(2)   --------->ANAC58---------->ID1                  <--- -->MYB46(2)<---------WOX13(1)        ---------->ID1------>MYB46(1)  <----------DOF2           ------ -->MYB111(1)  <---------TOE2(3)<---------YAB1 --------->ANAC46 <-----------GT1          <-----------GT1   tggataagaaagagattgatgttttgatatttttattcttgtcttttacacacctaattgtttgtttttctctttcatatctttggatttttttctacat  12799700     <---------MYB52(1)                                <-----------HVH21    --------->LBD16                                 <---------ANAC58  <---------LBD16                                   <---------ANAC58                   <---------ARR11(3) ------ICU4           <---------ALFIN1       <----------DOF2                          <---------CCA1(2) --->TOE2(3)      <------ZmHOX2a(2)       xxxxxxxxxxxxxxxx>smallRNA(i)          <---------GLK1(2)   tatttccggtattatctccgatcaccacttctcttccaaactctcatctttcttccttgtcacctctatttcttcacaaatggattctatatctaagtct  12799800                                                 <---------ATHB12                                                 --------->ICU4                                                 <---------ATHB51                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                               ------>MYB83                                               ------>MYB46(1)                                       --------->YAB1                                       <---------ICU4<---------AHL20(2)                                       <--------ATHB1<---------AHL20(1)                                       <--------HAHB4--------->AHL20(2)                                       --------->ATHB51                                      <---------ATHB12                               ----------->RAV1(1)<---------ICU4                            --------->ANAC46 <---------MYB59                       <---------AHL20(2) <-----------GT1                                         <--                   <---------ICU4     <---------ATHB51          ---------->DOF2               -------                  <---------YAB1      --------->AHL20(2)       --------->AHL20(2)          --------->ANAC58                  --------->ICU4      --------->ICU4 --------->AHL20(1)    ---------->DOF2 --------->ANAC58   ctatttgggtcatcaacttcattattttatatgcaacacaataattaccaaataattaattacaaataaagagttggcaaagaaatataaaacaagaaaa  12799900  Previous    Next  AGI:  At3g31430.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18636.1); similar to 80C09_29 [Brassica rapa subsp. pekinensis] (GB:AAZ41840.1) Range:  from: 12798340    to: 12799350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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