Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------AHL20(2)                --------->YAB1                -------->HAHB4                <---------ICU4                <---------AHL20(2)                -------->ATHB1                --------->ATHB51               <---------ATHB51                               ------->GAMYB               <---------YAB1                               --------->At4g35610             --------->YAB1                               <---------WRKY45             <---------ICU4                               <---------WRKY12             <--------ATHB1                               --------->ETT(2)             <--------HAHB4                               <---------WRKY38(1)            <---------ATHB51                             --------->WRKY18(1)            <---------ATHB12                       --------->DAG2   <---------ARR11(3)              -            --------->ICU4                       ---------->DOF2 ----------->RAV1(1)          <------  <---------DAG2<--------HAHB4            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                -------  <----------DOF2 <---------YAB1      ---------->DOF2  <---------MYB46(3)                     <------ -----AHL20(2) --------->ICU4        --------->AtMYB61--------->ALFIN1                --------->HSFB2a(2) --->AHL20(2)--------->ATHB51       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <---------HSFB2a(2)   aatgctttttggcaataattattaaaacctagtttctcaccaaagctaaatgaaaggtggtcaacagcaacatattttgctaattcttctcgatttcttt  12797100        ----------->GT1        <---------YAB1                                                                 <---------ARR11(3)      --------->YAB1                                                             ------>MYB83      <---------ICU4                                                 --------->ATHB12  --------->ARR11(3)     --------->ICU4                                               <------ZmHOX2a(1)   --------->GLK1(1) -------->YAB1                                                 <---------LBD16   ------>MYB46(1) ---------AGL15               --------->DAG2                 <-----------GT1<-----------GT1 -------->AGL15       <---------GLK1(2)             ----------->RAV1(1)<---------WOX13(1)         --- ----DOF2--------->YAB1      ---------->DOF2       --------->ANAC46 <---------YAB1  --------->YAB1===   tatcagaataatgaaaattcgaaagattagcaaaagtagcattttgagtttctccaccatatttttcaggatgattgttaaccaaatgatatctatatga  12797200               <---------GLK1(1)      ------>ZmHOX2a(1)     --------->TOE2(3)     --------->TOE1(3)  <---------ARR14(2)                        --------->YAB1  --------->ARR14(2)                     <---------ICU4  <---------ARR11(3)                    --------->ICU4  <---------YAB1                  ----------->GT1 <---------CCA1(2)             <---------YAB1         <----------DOF2         <----------DOF2 --->ZmHOX2a(2)--------->GLK1(1)       --------->At5g28300                 <-----------GT1 ============HOX2a_HOX2a     <----------DOF2<-----------GT1             --------->AHL20(2)     ------   tccatatcctaaacctgatttccaaaaaaaacttttattgcagtaattacaacatgctttcattgttccatcaattttttcttttcgaaagtgtaacttg  12797300                                                                                   <---------ANAC46                                                                                 <------MYB83                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC58                                     <---------ZAT6                           xxxxxxxxxxxxxxxxxxxxxxx        --------->ANAC58         <---------ANAC58                         --------->ATHB12         <x        --------->ANAC58         <---------ANAC58               <---------ANAC58 <------MYB46(1)  <--  --------->MYB52(1)            <---------ZAT2            <-----------GT1--------->ICU4      <------- --------->RVE1(1)        <-----------GT1  <---------ANAC58     <---------ANAC58<---------MYB46(3)--- ----->GT1              <---------WOX13(1) <---------ANAC58  <----------DOF2 <---------MYB46(3) -----   aaaatatcggaagcattcagacgttgatttactgagcttgtgttagcttgttcttcagtttcactttcttgagtattgatggctggtgttgagttatgaa  12797400                                                                                         --------->TOE1(2)                                                                                       <---------TOE1(3)                 ------->MYC2                                                          <---------TOE2(3)                 <-------MYC4                                                         --------->MYB52(1)             --------->ZAT18                                                          <-----------GT1             <---------ZAT14                                                          <---------DOF5.7(2) >smallRNA(fl3)  <-------MYC2                                                    <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           ---------->DOF2   --------->AHL20(2) -------ARR11(3) ------->MYC3                              --------->AHL20(2) --------->YAB1 --YAB1      <---------ZAT18                              <---------AHL20(2)  ----------->GT1 ------>ARR11(3) <-------MYC3       --------->YAB1        --------->AHL20(2) <---------YAB1 <-------- -->TEIL     --------->ZAT14      ------->TEIL          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ---   catcttctatcggtgtgcacatgttagatcgaaatgaatcagaaaacatttttaaacaaaataaataaagctcaaaaatatgataaattaacgttggatg  12797500            <---------YAB1          --------->YAB1         --------->KAN4(1)                                              <---------ANAC58         <---------KAN4(1)                                 --------->YAB1<--------P        <---------KAN4(2)                                  <---------AHL20(2)      <---------ICU4       --------->YAB1                        *TSS        <-----------TBP<---------ANAC58     -------- -MYB46(3)--------->KAN4(2)              <<<<<<<<<<<<<<<<<LFY          <---------MYB46(3)    -------- -------->GT1                  <-----------GT1     ------------>CBF <------------CBF         <-------   aagtaaaaagaataatccttgttttcaaaaattttagcatatgaaacaatggaaacaatatttataagaaaattggttgctatatttatggcaaaaatct  12797600                                               <---------ANAC58                                               <---------ANAC58                                               <-------GAMYB                                              <------MYB46(1)                                              <------MYB83                                              <---------MYB46(3)                                     --------->ALFIN1                                    --------->TOE1(2)                                    <-------MYC3                                    ------->MYC2                                    <-------MYC2                      <------MYB83                         ---------->DOF2     --------->MYB59     <---------ANAC46                      --------->ANAC58       <---------AtMYB61   <---------YAB1                      --------->ANAC58 <---------ANAC58     <-----------RAV1(1)  <---------GLK1(2)                    --------->MYB52(1) <---------ANAC58    <---------YAB1--------->ARR14(2)    --------->ICU4 --------->TOE1(2)--------->TOE2(2)    --------->ATHB51<---------ARR14(2) ->GLK1(2)        --------->MYB46(3)------->MYC3        <---------YAB1<------MYB46(1) ->ARR11(3)   <---------AHL20(2)   <---------ANAC58 <---------DAG2   --------->MYB46(2) --ARR11(3)   --------->AHL20(2)   <---------ANAC58 --------->TOE2(3)--------->MYB59   ttagaaatttttaaaattaaacaaacgaaaagaagaaacgtgcgagtttggttgccttattattgttgtgtttggtatccacatattcttatctgtttat  12797700                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    =                                                                                                    =                                                                                                    =                                                                                                    =                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                         --------->At4g35610                             --------->GLK1(2)                                         ------->TEIL -              ------>ZmHOX2a(1)           ---------->DOF2                       <---------AHL20(2)  <        --------->ALFIN1 <---------At4g35610                                <---------ARR11(3)   ----  <---------ETT(2)       --------->At4g35610                                --------->ARR11(3)   ----  --------->ETT(2)       <---------ZAT2  <---------WRKY45         <-------TEIL  --------->AHL20(2) --   tatgtcgagagtgttcctatttttcgcagctaatctagcttagtcaaagacgaagtctgaatgtgagattcaaaattagattttaaatgaacgctgaatg  12797800           <-------GAMYB         <---------TOE1(3)         <---------TOE2(3) ---------bZIP60(2) ---------TGA1a ---------O2          <---------MYB46(3) -------->O2<--------P<------MYB83 ======================================bZIP_DOF ==================MYC_MYB ==================MYC_MYB                                                            <--------P ====================MYC_MYB<---------DAG2                                           <-------GAMYB -------->TGA1a       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        <---------TOE2(2) ---------ANAC46      <------MYB46(1)                                           <---------O2 ---------ANAC58     <---------AtMYB61                                          <---------ANAC58 ---------ANAC55(1)  <---------MYB46(3)                                         <---------ANAC58 ---------ANAC58  <---------MYB46(3)                                            <---------ANAC46 -------->ANAC55(2) <---------MYB52(1)            <---------YAB1              <---------DOF5.7(2) ---------ANAC55(2)<-------GAMYB --------->YAB1<---------AHL20(2)          <----------DOF2 <---------DAG2 ------->TGA1 <------MYB46(1)   <---------YAB1 --------->AHL20(2)     ------>ZmHOX2a(1)    <--------- ------->HVH21<------MYB83  <----------DOF2    <---------YAB1      ---------->ID1 --------->ALFIN1 --------->STF1   <-----------RAV1(1)--------->MYB52(1)  ----------------->AGL3<---------TOE2(3) ----   tgacgtgtgttagggttggactgttggtgactttatcataaacggctatattattagtttccaaaatttgtcctactctttaacgtgggttagcttttta  12797900          <---------YAB1                 --------->YAB1         --------->AHL20(2)       <---------AHL20(2)    <---------AHL20(1)        <---------AHL20(2)        --------->AHL20(2)    --------->AHL20(1)        --------->AHL20(2)  --------->AHL20(2)          --------->AHL20(2) -DOF2 --------->AHL20(2)   <---------AHL20(2)      --------->ZAT6                       ---------->DOF2 ----->AtLEC2         <-----------GT1   <---------YAB1  <---------AHL20(2)        ------->TEIL    <--   tgcaaacaaattaatataagtatttcacatttattttttaatatgataagtctaacaataaattgaaaacaattttggtgaatgtatttttaaaagccta  12798000  Previous    Next  AGI:  At3g31422.1    Description:  transposable element gene. hAT-like transposase family (hobo/Ac/Tam3), has a 4.9e-70 P-value blast match to GB:CAA38906 Tam3-transposase (hAT-element) (Antirrhinum majus) Range:  from: 12795419    to: 12797545    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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