Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 ---------->DOF2                                                              --------->AHL20(2)                                                    --------->ANAC58                 <----------DOF2                                                    <---------ANAC55(2)          <------MYB46(1)                                                    --------->ANAC58             <------MYB83                                                    --------->ANAC55(2)      <---------ANAC46                                                   <---------LBD16           <-----------RAV1(1)                                                 ----------->HVH21    <---------ANAC58                                       <---------ANAC58       <---------AHL20(2)<---------AtMYB61                                       <---------ANAC46    ------->TEIL    <---------ANAC46      ------>NtERF2                    <---------ANAC58  <-------TEIL <---------ANAC46 --------DOF2                 --------->ICU4    <-----------HVH21     <---------ANAC58       <-------   ctttgtgaggccgattagatttagaaaatgtcagaattgtttcttgtttatgtcacggatgcatttaaagagtcgtgttgtgttggtctttgtttaagtt  12381900                                                                                              -------                                                                                       <---------ANAC58                                                              <---------AtLEC2         <---------ANAC46                                                       ------>ZmHOX2a(2)           <---------ANAC58                                                     <---------ARR11(3)            <---------ANAC58                            --------->YAB1           --------->ARR11(3)         <---------MYB52(1)                          ------>NtERF2         <---------ARR11(3)            <-----------RAV1(1)                    <----------DOF2             --------->ARR14(2)      <---------YAB1 <---------ANAC58 --TOE2(3)  <---------At4g35610 --------->GLK1(2)--------->CCA1(2) ------->TEIL<-------GAMYB --------   tatgtctgatatttagatgatactttgcagccataatctatgttttgctagatatgatctatttgtatgaacttcttattctgttgtttgcgagaaaaag  12382000                                   <------MYB46(1)                                   <---------ANAC46                                   <------MYB83                                  <---------MYB46(3)                                             <---                    ------>ZmHOX2a(2)                                                            ----                  --------->ARR11(3)     --------->YAB1                                          ----                  <---------ARR11(3)    --------->ICU4                                           ----              <---------ANAC46    --------->MYB59                                               <----         --------->ANAC55(2)     <---------ANAC46                                            <-------         <---------ANAC55(1)    <---------MYB52(1)                                 <---------GLK1(2) -->DAG2 <---------ANAC46      <-------GAMYB                        <---------AHL20(2)    <---------ANAC58 -->DOF2 <---------ANAC55(2)  <-----------RAV1(1)    ------>NtERF2--------->ANAC55(2)     <---------ANAC58   tagtttaagttatgtgttgtgatcttagggttctgttgggtaatgagcattgtgaggccaagtagtttaagtaattgtctgaattgattcttgtttgtca  12382100    ------->TEIL  <-------TEIL ------ANAC55(2)                                                                             ------>ZmHOX2a(2) ----->ANAC55(2)              <----------DOF2                                              --------->ARR11(3) ----->ANAC58         --------->ATHB12                                                     <---------ARR11(3) ----->ANAC58    <---------ANAC58                 <---------At4g35610                 <---------ARR11(3) -----LBD16      <---------ANAC46             <---------REM1(1)       --------->GLK1(2)--------->CCA1(2) ----HVH21       <---------ANAC58     <---------TOE2(3)   <----------DOF2             --------->ARR14(2)   cggatgcatttgaagagttgtgtgttattggtctttgtttaagtttagttgtagatgatactttgtagccacaatctatgttttgctagatatgatctgt  12382200                                                                                             <-------                                                                      <-----------GT1  <---------ANAC58               --------->MYB46(3)                      <---------CCA1(1)      <---------ANAC58              ------>NtERF2                          <<<<<<<<<RAP2.2 *TSS     <---------ANAC58      <        <----------DOF2                         <---------ICU4 <-----------HVH21       <---------ANAC58   --------->YAB1               <-----------------AGL2<---------ARR11(3)      <---------ANAC46    <--  <---------YAB1----------->RAV1(1)    --------->MYB59--------->ARR11(3)--------->MYB46(3) <---------ANAC46   ttgtatgatactttgcagccacagtctatgttttgctagtttaggtctaatatttagatattatctgtcatataacaactgcttgtttttcttgtgtatg  12382300                                                                                          --------->ALFIN1                                                                                          <---------ANAC58                    --------->ANAC46                                                      <---------ANAC58       --------->ANAC46                                                                  <-------MYC3       <---------LBD16                                                                   ------->MYC3      <---------LBD16          --------->MYB59>>>>>>>>>TAC1                     --------->At4g35610 --AtLEC2           --------->ANAC58<---------KAN4(1)                           --------->ZAT2 xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<------ZmHOX2a(1)                              <---------At4g35610 -------TOE2(3)     --------->ANAC58--------->KAN4(1)                           <---------ZAT2   gaggtttactcgggacacaaactcgctacttgttaggaatattactcgagtgtttacaaacaaatttgatggtccctactacagctgaacatgtgtgcct  12382400                                                                    <----------DOF2                                                            <-----------GT1                                                         <---------ICU4                                                        --------->AHL20(2)                                                        <---------YAB1                  <----------DOF2                       <----------DOF2                  <---------AHL20(2)             <---------DAG2            <---------ANAC58                        --------->AHL20(2)              <-----------GT1--            <---------ANAC58       <----------DOF2  <---------AHL20(2)     <-----------GT1         <-   caagagaaatacttccttgagttttcttttaagtgttctttcagcccttcttatatatataattacgcttcttttttttactgacattaccttttgtatt  12382500                      ------>ZmHOX2a(1)                      <----------DOF2                        ------>ZmHOX2a(2)                    ------>ZmHOX2a(2)                      --------->ARR14(2)                   <------ZmHOX2a(2)                       <---------ARR14(2)                       -                  --------->ARR11(3)                       --------->AGP1                           <           --------->ATHB12                                <---------ARR11(3)                     ---        --------->ANAC58                                   --------->ARR11(3)                     ---        --------->ANAC46                                  <---------GLK1(1)                    ------        --------->ANAC58 --------->YAB1                  ----------->ARR10                    -------  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <---------AHL20(2)                         ------- ------->HSFB2a(2)--------->ARR14(2)          <---------YAB1<------ZmHOX2a(2)              <xxxxxxxxx --------HSFB2a(2)<---------ARR14(2)  <---------ARR14(2)--------->YAB1       ---------->DOF2  -------   tgtagaaaacacaccattgggatcctttgataacatggactatccagtattatttcaatgagatctgtttaaggcgaatgaaaggcatggttagcaccgc  12382600       --------->ANAC46       --------->ANAC58                                                                         -----       --------->ANAC58                                                                         <---- -------->ARR11(3)                                                                              <---- ---------ARR11(3)                                                                              ----- ------>ANAC58                                                                     ---------->DOF2 ------>ANAC58                                                                   --------->ANAC58 --->LBD16                                                                       --------->ANAC58 -->ANAC58                  ----------->GT1                                 <---------At4g35610 <---- -->DEAR3(1)     --------->TOE1(3)                                          --------->At4g35610 ----- xxxxxxxsmallRNA(i)        ----------->GT1               --------->ZAT14   ------->TEIL ----------->GT1 -->ANAC58       --------->TOE2(3)                       <---------ZAT14<---------REM1(1)      ------   aagaactagacgaaataaaccttaatggattggaaaaactctatggaaaacaatgactgtgtactgggacactgatgaagctcaagaaagaagtcaaata  12382700 ---->AHL20(1) -----AHL20(2) -----AHL20(1) ---->AHL20(2)               --------->WRKY18(1)                                --------->ANAC46 -----ARR11(3)             ------->GAMYB                                   --------->ARR14(2) ---->ARR11(3)          --------->MYB52(1)  <-------TEIL                   <---------ARR14(2) --->AHL20(2)    ----------->HVH21    ------>ZmHOX2a(1)                   --------->GLK1(1)      ----   tattcaaatgcccgtctgtctgaccgtaacggtctaggtcctcacatacatttctcaaggtcgaagtcatatcagcaaatccaagacaaattagtgagtc  12382800  Previous    Next  AGI:  At3g30744.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 8.2e-41 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 12382269    to: 12383569    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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