Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <----------DOF2                  ------>MYB83                                                                      <               --------->DEAR3(2)                                                              <-----             <-----------GT1       <---------GLK1(1)                                      >>>>>>>>>MYB98          <---------AHL20(2)<---------ANAC58                      <----------ID1      ----------->GT1         --------->AHL20(2) <---------ANAC58                 ---------->DOF2        ---------->DOF2 <    <---------YAB1------>MYB46(1)  --------->GLK1(1)    XXXXXXXXXXXXXXXXXXXXX>MIR2936--------->DAG2 -   gggattatcaattttataccgactctttttgcttcggctatcccaaaatccaaacccttgaaaaaaagaagacaaactaattaacaaaaagtaacatata  12148600                                                                                           --------->ARR14(2)                                                                                         --------->LBD16                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC55(2)         --------->DAG2           <---------MYB46(3)     <----------DOF2  <---------ARR14(2)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <---------MYB46(3)      ------>NtERF2   <---       ---------->DOF2   ----------->HVH21    <------ZmHOX2a(1)           --------->ARR14(2)--------- ---------TOE2(3)       --------->TOE2(3)   <---------TOE1(2)           --------->At5g28300<---------ARR14(2) ----AHL20(2)           --------->TOE1(3)   <---------TOE2(2)        --------->ZAT18    --------->ANAC55(2) ---------TOE1(3)      ----------->RAV1(2)--------->TOE1(2)        --------->ZAT18<------NtERF2  ---- -------->MYB59       -------->P<---------MYB52(1)<-----------RAV1(2)<---------ZAT18   <---------LBD16   tttaggttgaaaaggcttcacacttacctgaaacgtttgttcatcgtaggaaccaggggctgtttggagagcgcggtatatggcgccattgcggaacccc  12148700                                                                                      --------->ANAC58                                                                              --------->HSFC1(2)            <-----------HVH21                                                 <---------At4g35610           ------>ZmHOX2a(2)                                                  <---------HSFC1(2)          <------ZmHOX2a(2)                                                   <---------HSFB2a(1)         <---------ARR14(2)                                                   <---------ZAT2     ------>NtERF2                                                            --------->At4g35610   <---------ANAC58                                                <---------ANAC58   --------->ANAC58   <---------ANAC46                                                <---------ANAC58  --------->SPL7   <---------ANAC58                                                <---------ANAC46<---------SPL7   --------->ATERF1(1)                                        <-----------RAV1(1)<-------TEIL  <-------TEIL                                            --------->ARR11(3)<--------P--------->ANAC46 --------->ALFIN1                                        <---------CCA1(2) <---------MYB52(1) ------STY1(1)                 <---------ANAC46      ------>ZmHOX2a(2)   ------>ZmHOX2a(2) >GLK1(1)--------->ARR14(2)    <---------ANAC58    --------->ARR11(3)  --------->ARR14(2) --------->ANAC58 ----->STY1(1)                 <---------ANAC58    <---------ARR11(3)  <---------ARR14(2) --------->ANAC58   taggtgcgggcgatcgtcaaaccgagactagttgcgttttgaaacacattagtgatcttaaatcttgtggctggatcggtagcttcgtacgcgagccagt  12148800                                                                                   --------->HSFB2a(1)                                                                          ----------->RAV1(2)                                                 ------>NtERF2 <---------MYB52(2)  <---------At4g35610                                                --------->ANAC58      <-----------HVH21                                        <---------AHL20(2)     --------->ANAC46    <---------HSFC1(2)                                        --------->AHL20(1)     --------->ANAC58    --------->At4g35610               <---------ANAC58         <---------AHL20(1)     --------->ANAC58    --------->ZAT2               <---------ANAC58         --------->AHL20(2)--------->At4g35610      --------->HSFC1(2)               ----------->GT1         --------->AHL20(2) <---------At4g35610      <---------ZAT2               <---------ANAC46    <---------TOE2(3)     ------>ZmHOX2a(1)<---------O2              <-----------------------TaNAC69(2)--------->ANAC58     --------->ANAC46         =======    ---------->DOF2               --------->YAB1--------->ANAC46  ------->TEIL   <------NtERF2------>ZmHOX2a(1)   aggcattgaagccattagcgtaaaatggtttcccattgagaataaattggacgccattcctgctcacgaacccatcacttggcgcagcttctactcctac  12148900            --------->YAB1       ---------->DOF2                   <----------DOF2           <------ZmHOX2a(2) --------->ANAC58                     <------------------------ANAC81       <---------ZAT18       --------->ANAC58          <----------DOF2  <----------DOF2      ---------->DOF2     <---------ALFIN1    <----------DOF2       ------>ZmHOX2a(1) =================HOX2a_HOX2a----------->GT1       <---------GLK1(2)            <---------At4g35610 -   atagctttgtgcgatcacaatcgctaaaagcacgataaaacacaaacacttcatattcttttcgactttctttttgtttttgtgctcctatcgttttcta  12149000                                                                                        --------->ANAC46                                                                                        <---------TGA1a                                                                                        <---------ANAC58                                                                                        --------->TGA1a                                                                                        <---------O2                                                                                        --------->ANAC55(2)                                                                                        <---------ANAC58                                                                                        --------->O2                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               <--------HAHB4                                                                               --------->ATHB51                                                                               <---------ICU4                                                                              --------->ICU4            --------->DAG2                                                    <---------YAB1        -           ---------->DOF2                                                  --------->YAB1       ----          <---------AHL20(2)                                               <---------YAB1       <----        <-----------TBP                                                <---------ARR14(2) -----------      --------->AHL20(2)              ------------>CBF                 --------->ARR14(2)<-----------HVH21      <-----------TBP              <------------CBF                <---------LBD16    <xxxxxxxxxxxxxx      <---------AHL20(2)         <---------YAB1                   <---------ANAC58    --------->ANAC58    <-----------TBP       <----------DOF2            ------->TEIL <---------ANAC58    --------->ANAC58 ---------->GT1     <-------TEIL------------>CBF<---------AtLEC2  <---------ANAC46    --------->ANAC46   acgagtatatatataaagggcatacatgctttcttacaattgcaatgcatgcatgaacattcactaattcgtggattttcataattacacgcgtgacatc  12149100                                                                                      ---------------                                                                                     --------->TOE2(3)                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                                  <---------CCA1(2)                <---------YAB1                                 --------->YAB1  <---------ARR11(3)                ------------>CBF                          ------------>CBF     --------->ARR11(3) xxxsmallRNA(le3)<---------ICU4                           ------>MYB83   ------>ZmHOX2a(1) ---------->GT1--------->TOE2(3)                 <---------AHL20(2)      <---------HSFB2a(2) ----->TOE2(3)--------->YAB1           <---------YAB1     ------>MYB46(1)--------->HSFB2a(2) ---TEIL     <---------ATHB12       <---------YAB1   <-----------GT1<---------HSFB2a(1) >HVH21      --------->ICU4    <<<<<<<<<TBF1     --------->AHL20(2) --------->HSFB2a(1) xxxxxxxxsmallRNA(le3)      <<<<<<<<<TBF1    <---------YAB1 --------->YAB1     <---------AHL20(1)<---   catagtaaataagaaatcatcaatacattcttcttcttcttattactatgatttattacctacaataagaacatcctagaatatatatcttagataatat  12149200                                                      <---------GLK1(2)                                                  <---------ANAC55(2)                 <---------ICU4                   --------->ANAC55(2)                 --------->YAB1                  xxxxxxxxxxxxxxxxxxx>smallRNA(se3)              --------->YAB1                ------->TEIL             <---------AHL20(2)             <---------TOE2(2)             --------->AHL20(2)             <---------TOE1(2)            --------->AHL20(1)              <-------TEIL            <---------AHL20(1)              --------->SPL7         --------->AHL20(2)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         <---------AHL20(2)               <---------SPL7        <---------AHL20(2)               <---------ANAC58    <-------GAMYB                      <----        --------->AHL20(2)               <---------ANAC58   ----------->GT1        --------->AHL20(2)       <---------YAB1                   --------------->AtSPL3                   <----------DOF2-----    <---------AHL20(2)                  <---------------AtSPL3                  --------->TOE2(3)    --------->AHL20(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <-----------GT1 --------    <---------YAB1          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------AHL20(2)   <---------TOE2(2) ------>WRI1<---------AHL20(2) <---------YAB1  <---------MYB52(1)    --------->AHL20(2)    <---------TOE1(2) --------GT1--------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------AHL20(2) --------->YAB1   caccatattattaatttaataataatctactctattatttgagacgtacgttaagtgattctcggttaaaattttttttttacctttaaatcatatgttt  12149300                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             --------                                                                   <---------MYB52(1)        <-------                                                           <---------ICU4                 --------->SPL7                                                         --------->ARR11(3)             <---------SPL7                                                        --------->YAB1                ---------------                         <---------DAG2            --------->TOE2(3)                 <---------At5g28300            <---------YAB1<----------DOF2         ----------->GT1 <---------SPL7    <-----------GT1 ----------->GT1      <-----------GT1             <---------ANAC55(2)               <---------WRKY18(1) -----AHL20(2)   --------->DAG2                   --------->ANAC55(2)   <----------DOF2 <-----------HVH21 ---->AHL20(2)  ---------->DOF2                 <-----------GT1  <---------MYB46(3)xxxxxxxxxxxxxxxx>smallRNA(i) --->GT1    --------->AtLEC2                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->WRKY38(1)   aaatggttaatgtcatgaaaaagtttaccttttactgagaataacttaagttacgttataatcttggccgttcgcttgaattgttttgaccgtccgatct  12149400                                                           --------->ANAC55(2)                                                           --------->ANAC46                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       xxxxxxxxxxxxxxxx>smallRNA(si3)                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                               --------->ATHB12     <---------ICU4                              <---------YAB1   <------------ATHB5 --------->ARR11(3)                            <---------ICU4     --------->ATHB51  --------->YAB1                           ------>ZmHOX2a(1)   -------->ATHB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         ------>ZmHOX2a(2)     <---------ICU4   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <------ZmHOX2a(2)      <--------ATHB1  xxxxxxxxxxxxxxxx>smallRNA(i)                       --------->ARR14(2)     <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       <---------ARR14(2)     <---------ATHB51xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     xxxxxxxxxxxxxxxx>smallRNA(s)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     --------->LBD16          --------->ICU4--------->TOE2(3)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------TOE2(2)                   ------->MYC3              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   - >ZmHOX2a(2)       <---------LBD16         <---------YAB1 <---------TOE1(2)                        <- ->ARR14(2)        <-------MYC3         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <-- --ARR14(2)       <xxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           ----- >AtSPL3          --------->ANAC46<---------LBD16    <-----------HVH21                 --------->ALFIN1   cgagccttcacttaaaaaacacgcggatccttatgactcgggtttacaattattgggtcatacgttataatcttggccattcgattgaagtgtttgtgtc  12149500  Previous    Next  AGI:  At3g30540.1    Description:  (1-4)-beta-mannan endohydrolase family. Identical to Putative mannan endo-1,4-beta-mannosidase P precursor (MANP) [Arabidopsis Thaliana] (GB:Q9LW44); similar to (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G10900.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45852.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 12147271    to: 12148954    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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