Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                             <---------AHL20(2)                                                 -----                             --------->ATHB51              --------->TOE2(3)                   <-----                             --------->AHL20(2)          --------->GLK1(2)                     ------                        ------>ZmHOX2a(1)               --------->CCA1(1)                     <------                       --------->TOE2(3)           --------->YAB1                             -------                       --------->TOE1(3)           --------->AHL20(2)                         -------                <---------YAB1                  --------->YAB1           <-----------ARR10    <------                <---------AHL20(2)            --------->AHL20(2)         <---------ARR11(3)  --------               <---------AHL20(1)             --------->AHL20(1)      --------->AHL20(2)     <-------               --------->AHL20(1)      --------->AHL20(2)<---------ARR11(3)               <---------ICU4               --------->AHL20(2)      <---------AHL20(2)--------->ARR11(3)       ---------->DOF2  <-              --------->YAB1 <---------ICU4--------->AHL20(2)    --------->AHL20(2)      --------->ICU4             <---------YAB1 --------->ICU4 <---------AHL20(2)    <---------AHL20(2)      --------->AHL20(2)            --------->AHL20(2) <---------YAB1--------->YAB1--------->YAB1--------->GLK1(2)--------->YAB1 -------AHL20(2)--------->AHL20(2) --------->AHL20(2)   --------->RVE1(1)--------->ARR11(3) <-------- ------AHL20(2)<---------AHL20(2)  <---------AHL20(2) --------->AHL20(2)--------->RVE1(1)<---------AHL20(2)   ttaatgacatagattaatataatttccttaattatttttaattaaaaaaataataaaaaaatcttaattaaaaaaaatctaactaaaagtattaattata  12106500 -----ICU4 ---->YAB1                                                                                    ------- ----YAB1                                                                                    <------- --->ICU4                               --------->AHL20(2)                      <---------RVE1(1) ---AHL20(2)                          --------->AHL20(1)                       <---------GLK1(2) -->AHL20(2)                         --------->AHL20(2)                        --------->ARR11(3) -->AHL20(1)                       --------->AHL20(2)                          <---------ARR11(3) ---AHL20(1)                --------->YAB1             <---------KAN4(1)      <---------RVE1(1) ->YAB1               --------->ANAC46<---------AHL20(1)             <-----------GT1        <-------- --ICU4    --------->ANAC46 ----------->GT1<---------AHL20(2)   <---------AHL20(1)         --------->YAB1 ----------GT1        --------->ANAC55(2)<---------AHL20(2)     --------->AHL20(1)      <----------DOF2 -YAB1   --------->ZAT6 <---------AHL20(2)--------->YAB1        <---------ARR11(3)  <-----------GT1   attacacaataacacaaaacatataagtaattgtaaaaaatatataatattctaacaatattccaatatttttacaagagagatttttatcttttatcat  12106600                                      <-----------GT1                                    --------->ANAC55(2) --------->WRKY38(1)                                   <---------------AtSPL3                                   <---------------AtSPL8                                   --------------->AtSPL8                                 --------->ICU4       <-------GAMYB                              <---------YAB1        <---------TOE2(3)                      <---------AHL20(2)          <-----------GT1    <-----------GT1   <---------YAB1<---------ANAC55(2)<---------MYB52(1)            <---------MYB52(1) <----------DOF2     --------->AHL20(1)       <---------YAB1                        --------->LBD16 -->YAB1             <---------AHL20(1)<---------At5g28300                   <---------AHL20(2) ----- --YAB1<---------DAG2--------->AHL20(2)------->TEIL<---------At5g28300   <---------AHL20(2) <-------- ---GT1<----------DOF2--------->AHL20(2)   <---------MYB52(1)       <---------YAB1<---------LBD16   tctcttttactttttttctaaaatataattttctaattatgtaccgttcttattaccgttgtctaaaattttgatttttttaattccggtttttaaaatt  12106700                                                          ---------->DOF2                                                      ----------->RAV1(1)                                                <---------TGA1a                                                --------->bZIP60(1)                                                <---------ANAC58                                                --------->TGA1a                                                --------->O2                                                <---------O2                                   --------->YAB1 --------->ALFIN1                           <---------DEAR3(2)   <---------bZIP60(1)                          <---------DREB2C(2)   --------->ANAC55(2)                          <---------DEAR3(1)    <---------ANAC58                         <-----------ARR10                          <---------At1g77200   =====================bZIP_DOF    ------->MYC3                          <---------DEAR4(1)    <---------bZIP60(2)              <-------MYC3     ===                         --------->DDF1         <---------ANAC46           --------->ANAC58       ---     <------------------------ANAC81           ----------->STF1            --------->ANAC58    ------    <---------AHL20(2)  <-----------HVH21    ----------->HVH21            --------->SPL7 --------->ARR11(3) ------>GT1            <-----------RAV1(1)   ----------->TGA1          --------->YAB1    <---------ARR14(2) -YAB1        <---------AHL20(2)  <---------YAB1<---------ANAC55(2)<---------ALFIN1     <---------CCA1(2)   gtgaatttttttttgttttattgatatgtcggtgctataatagttctatgacgtggccacaaaagagacacactcgtaagacatgtgttcaaatcttgtc  12106800        --------->ARR11(3)                                                      --------->ANAC46        <---------ARR11(3)                                   --------->TOE2(1)  --------->ANAC58       --------->YAB1                                       --------------->AtSPL3            <------     --------->ANAC58                                       --------------->AtSPL8          ---------     --------->ANAC58                               *TSS<---------GLK1(2)       --------->ANAC58 --------->ANAC58        <---------GLK1(2)        --------->YAB1          --------->At4g35610-------- --------->ANAC58   <---------RAP2.6(3)           <---------ICU4--------->SPL7<---------ALFIN1------- --------->AtLEC2  --------->RAP2.6(2)           <---------ATHB12    --------->YAB1        ---------- ===============HOX2a_HOX2a                     <---------ARR14(2)   <---------ICU4    <----------ID1 --->ZmHOX2a(1)  --------->At4g35610            --------->ARR14(2)  <---------ATHB12 ---------->DOF2 ---->ID1<------ZmHOX2a(2)                   ------------>CBF--------->TOE1(1)--------->REM1(1)   ctcatgcaaggatcatatgagccgaaatattctcttatactcgaaaacccaatcttcacattctcgtacaatcatcatctacacccaaaaagaaaaagga  12106900                                                       ------>MYB46(1)                                                     <---------MYB59                                             ------>MYB83                                           <---------MYB46(2)                                           --------->MYB46(3)                                           <---------MYB52(2)                                   <---- --------->AHL20(2)                        --------->DEAR3(1)------>NtERF2                    ------- ----ID1                                  --------->ANAC46  --------->DEAR3(1)               <------- >DAG2                         ------>ZmHOX2a(1)     --------->AtMYB61  --------->ARR11(3)   -------- --->GT1                 <---------At4g35610 ------>MYB46(1)----------->HVH21   --------->At4g35610 ---->GT1             <-------TEIL      --------->MYB52(1)  <---------ETT(1)    <---------At4g35610 < >DOF2           <------ZmHOX2a(1)    --------->AtMYB61------>MYB83     <---------ARR11(3) --------->TOE2(3)   aaaaaaaatcaatggctgaggagtttcatcttcctctaaacctcaccgaaccagaccaaactccgaccgaagaagatttcgaagcagacactacattaat  12107000                                                                     --------->TOE1(2)                                                                    ------>ZmHOX2a(2)                                                                  --------->ARR14(2)                                              <---------ICU4      <---------ARR11(3)                                              <------------ATHB5  <---------ARR14(2)                                              --------->YAB1      --------->ARR11(3)                                             <---------ATHB12     <---------AGP1                      <---------ALFIN1       --------->ICU4 ------->MYC3 -----WOX13(1) <---------MYB52(1)          --------->WOX13(1)    <---------CCA1(2) -->ATHB12--------->TOE2(2)          --------->ANAC46       <-------MYC3 --AHL20(2)    --------->DOF5.7(2)  <---------LBD16      <---------ALFIN1 ->AHL20(2)   <-----------HVH21    --------->MYB52(1)   <---------REM1(2)      --------->ARR11(3) ----------ID1<-------GAMYB     --------->ARR14(2)    <---------WRKY38(1)      <---------ARR11(3) ---   tgacgacgaatacctccgttacctccactacttggattcacggagcaatcatggagtcaacacgtttggatcttacgatgaaatctttggtctagttctc  12107100                                                       <---------ANAC46                                                    <---------ANAC46                                                    --------->ALFIN1                                                  <---------MYB46(3)                                                 <---------AtMYB61                                                 <---------DEAR3(1)                                                 --------->ALFIN1                                                <---------MYB52(1)                                               --------->LBD16                                            --------->MYB52(1)                                          <---------HSFB2a(1)             -------->HAHB4                               <-----------RAV1(2)--------->MYB55(2)      --------->ATHB12                        <---------ANAC58  --------->HSFB2a(1)        <------ZmHOX2a(1)                        <---------ANAC58 <---------HSFC1(2)        <---------TOE2(3)                       <------NtERF2     --------->HSFB2a(1)   <---------At4g35610                      ------>NtERF2      --------->HSFC1(2)    --------->At4g35610                     <---------DEAR3(1)  <---------HSFB2a(1) <---------RAP2.6(2)                    =                    --------->At5g28300 <---------ARR14(2)  <---------LBD16                         <                  <---------DEAR3(1)    <-----------ARR10  --------->MYB52(1)                 <------                <---------TOE1(1)       --------->ARR14(2)<---------ZAT14--------->ICU4       <------         ------>ZmHOX2a(1) --------->MYB52(1)<---------LBD16<---------At5g28300               <------ ------>At5g28300<---------LBD16       <------ZmHOX2a(1)  <---------ARR14(2)                <--------   ggtaattcatcctcttgtacgcggtggcttaacgcaggggaggaacttccggtggtggagtttacggctgaggaaatgatggagagaggtttagtggttt  12107200                                                                 --------------->AGL15                                                                 --------->YAB1                                                                 <---------------AGL15                                                                 --------->TOE1(3)                                                                 --------->TOE2(3)                                                              <-----------GT1                                                           <---------ICU4                    <---------At4g35610                    <--------HAHB4 --------------->AGL15                                     --------->ATHB51             <---------ANAC58 <----------DOF2 <---------ANAC58                         --------->ICU4     --------->ARR14(2) <---------------AGL15                                    <---------YAB1     <---------ARR14(2) ================================================================================MADS_MADS -----------------AGL3 <---------At4g35610             <------NtERF2---------->DOF2     <---------ANAC58 ---ANAC46       <---------ANAC58                    --------->ETT(1)        ------->TEIL ---ANAC58      --------->ZAT2                      --------->RAP2.6(3)     <---------CCA1(2)     --- ---ANAC58      --------->At4g35610             <---------ANAC58<---------YAB1  --------->HSFB2a(2) -MYB46(3)    <------ZmHOX2a(1)                 <---------ANAC58----------------->AGL1 <---------MYB46(3)   gtgctatatgtagagaggagcttgctgctaatgagaggctctcagagcttccttgtcggcattattaccataaagagtgtatctcgaattggttgagtaa  12107300                                          <---------MYB55(2)                                          --------->MYB46(3)                                         ------>MYB83                                         ------>MYB46(1)                                         -------->P                                              ----                           <---------ANAC46                                                     <----                           <---------ANAC58<---------ALFIN1                                   <------                    <-----------TGA1    ------>MYB46(1)                                       -------                   --------->ETT(2)     ------>MYB83                                          -------                   --------->bZIP60(1)<---------MYB59                                   --------->MYB52(1)                   <---------bZIP60(1)--------->MYB46(3)                              --------->AtMYB61                  ---------->ID1     --------->ANAC46                                 <---------MYB59              <----------DOF2      <-----------GT1 <---------TOE2(3)     <---------YAB1 ------>MYB83          <---------ZAT18  <---------bZIP60(2) <-------GAMYB          <---------AHL20(2)------>MYB46(1) ------>YAB1<------NtERF2  <---------ANAC58------->GAMYB   <---------AtLEC2       <---------ETT(1)---   tcggaacacttgtccgctttgtcgtcataacgtggaattacccaaccacggttgagattgtgcatgtagtattttcttattgttccgaccaaactgtatc  12107400  Previous    Next  AGI:  At3g30460.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G02340.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96854.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 12106852    to: 12107518    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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