Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                       <---------AHL20(2)                                                                                      <---------AHL20(1)                             <----------DOF2                                          --------->AHL20(1)                 --------->YAB1           ---------->DOF2                        --------->AHL20(1)                --------->ICU4           <------ZmHOX2a(1)          <---------ALFIN1  --------->AHL20(2)                <---------YAB1         <---------TOE1(3)           <---------ZAT18    <---------AHL20(2)              --------->YAB1 <---------DAG2            --------->GLK1(2)         <---------AHL20(2)    <----------DOF2  ----------->GT1   <---------TOE2(3)         --------->PCF2  --------->AHL20(2)   gataaactttttagagtcatcataagtaaaactttttgtttaaggaaagaagaaacgattctatattggcccacttgatgaaataaaataaaatttcaag  11926500                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC58         ---------->DOF2          --------->MYB52(1)  --------->ANAC46           <-----------GT1 --------->TOE1(2) ------>CCA1(2)          <---------RVE1(1) --------->ARR14(2) ----ZmHOX2a(2)         --------->ARR11(3) <---------ARR14(2) ----->ARR11(3)         <---------ARR11(3) --------->GLK1(2)   <------MYB46(1) ----->AGP1           ----------->ARR10   <---------GLK1(1)    <------MYB83 ------ARR14(2)   ----------->GT1----------->HVH21            --------->MYB59     ----------->HVH21 ----->ARR14(2)  --------->DAG2<---------AtLEC2             --------->ARR14(2)--------->ARR11(3) ------ARR11(3)---------->DOF2 --------->ANAC55(2)          <---------ARR14(2)<---------ARR11(3)   atccactaaacaaaagagaaaggtgagatttttacatgacgggcaaatctgggattgtcgaagataggtctccaagagaagatagtgacagggatagagt  11926600                                                                                               ------                                                                                               ------                                                                                               ------                        --------->TOE1(2)                                                      ------                     <---------ARR14(2)                                            ------>MYB46(1)                     --------->ARR14(2)                                            ------>MYB83<-----              --------->At4g35610                                                 --------->WOX13(1)              <---------At4g35610      <----------ID1---------->DOF2             --------->AtMYB61   aatcggagattgagtcatctgtgaatccagcgagaagaaaatggacaagaagagagaaagcagagagaacaagaccaagaagaccaatccatttcatacg  11926700                                                                  --------->ALFIN1                                                                <---------bZIP60(2)                                                           <---------ANAC46                                                         <---------ZAT14    --------->HSFB2a(2)                                  --------->ZAT14    <---------HSFB2a(2)                               <---------ANAC46 --->ANAC58                                         --------->ZAT14     <----------DOF2 --->ANAC46                                         <---------ZAT14<---------MYB46(3) --->ANAC55(2)                                 ---------->DOF2  <---------ANAC46           --------->MYB52(1) --->ANAC58 <----------DOF2--------->REM1(1) ----------->HVH21<---------ZAT14         <------ZmHOX2a(1) ----ANAC55(2)<-----------GT1             <---------ARR11(3)  --------->ZAT14      <---------------AtSPL8   cgacttcaagaagactttaccttctcccttcatctctacttcaagatgtgaaagtgaagtgaagtgaagtggttcttttgctaatggaggacataacaga  11926800                                                          --------->ALFIN1                                                         <-------MYC3                                                         <-------MYC2                                                         ------->MYC3                                                         ------->MYC2                                                         <-------MYC4                                                         ------->MYC4                                                        <---------ANAC46                                                        <---------O2                                                        <--------ABF1                                                        --------->TGA1a                        ------                                                        <---------ANAC55(2)                  *TSS ---                                                        <---------TGA1a                 --------->ALFIN1                                                        --------->O2                 ------>ZmHOX2a(2)                   --------->DAG2                       --------->ANAC55(2)        --------->ARR14(2) <---------ZAT14  ---------->DOF2                   --------->CCA1(2)              <---------AGP1<<<< ---------->DOF2  ================================================bZIP_DOF         <---------ARR14(2)   gactaaagtgagagtagaagaaaagttgaatcggaagagagagagagagagaagagacacgtgtgagaacatgtctggagaagtagatcggtgttgatcg  11926900              --------->PCF2           <------------CBF            <------MYB46(1)           --------->ATHB12           --------->MYB59           <---------YAB1       <---------MYB46(3)          <----------DOF2      <--------P             <---------ARR14(2)     <---------ANAC58        --------->ARR14(2)     <---------ANAC58        --------->ARR11(3)   <----------DOF2 >ZmHOX2a(2)<------MYB83     <---------ARR11(3)   <---------DAG2 --------->CBF--------->PCF5 --------->GLK1(2) <---------AHL20(2)            ----------->HVH21 <<<<<<<<<<<<<LFY            <-----------ARR10 <-----------GT1  <-----------GT1      <----------DOF2   gacaatgggttgtttggtccctctctctgaaaatctgctttcattgaatttacttttttttttttttttctatgtttctctgacgcgcttattctacgag  11927000                                                    <---------AHL20(2)                                                    <---------YAB1                                                    --------->AHL20(1)                    --------->YAB1                 --------->AHL20(2)                            <---              --------->ZAT6                       --------->YAB1                  ----------------->AGL1           <-----------GT1                      --------->YAB1        --------->AHL20(2)         ====        <---------MYB46(3)<---------DAG2       <---------YAB1     --------->AHL20(1)         --------   <---------At5g28300    <----------DOF2    --------->YAB1       --------->AHL20(2)<---------------AGL15  <-----------GT1   <------ZmHOX2a(1)        ----------->GT1      <---------AHL20(2)--------------->AGL15   tgatttacagttgttacctctaggataacttttttttttgtttcccattgtaataatattgagaaaaataaaatatatgtctgtttcaaatttgagaaag  11927100                                                        <---------AHL20(2)                                                        --------->AHL20(2)                                                 <---------AHL20(2)                                                --------->AHL20(2)                                               <---------YAB1                ---------->DOF2                                            --------->AHL20(1)         <---------ICU4                    <------ZmHOX2a(2)       <---------AHL20(2)         <--------ATHB1    <---------ICU4 <---------ARR11(3)       --------->AHL20(2)         --------->ATHB51    --------->YAB1 --------->ARR11(3)--------->YAB1 <---------AHL20(2)--------->ICU4        --------- ---ZmHOX2a(1) ---------->DOF2       ----------->GT1--------->AHL20(2)<---------ATHB12     --------->DAG2 ==========================HOX2a_HOX2a     <---------AHL20(2)         <---------ATHB51    ---------->DOF2 -->DOF2  <----------DOF2--------->YAB1    --------->AHL20(2)       --------->YAB1  --------->AtLEC2<   gacctataatgacttttaaaagatcaaaaataactcaaattgtaattttattatataattttttaaactacaataattcaaaagcgatgcaaaaaagttt  11927200                                  --------->ARR11(3)                                  <---------ARR11(3)                                             ----   <---------WOX13(1)         <---------ZAT6               --------->ANAC58                     <---- --------->ATHB12 <---------AHL20(2)                       --------->ANAC58                     ----- -->GT1           --------->AHL20(2)                    <----------ID1                         ------ ---------YAB1   --------->AHL20(2)<---------YAB1     ---------->DOF2                          <-----   atatgattgagttttttcatttatttatagtagtattatcttcgattttaaaaaaaaaaagacgaaataaaaactctctaaatccaattcgaaaccaata  11927300                                                                                  --------->GLK1(1)                                                                                 --------->ARR14(2)       <----------DOF2                                                           <---------ARR14(2)  XXXXXXXXXXXXXXXXXXXX>MIR837-5P                                 <---------ARR14(3) ----->WOX13(1)                                                  --------->GLK1(2)<---------GLK1(1) -----AHL20(2)                              --------->ANAC46     --------->ARR14(3) ---->AHL20(2)                     ----------->GT1               <---------ARR11(3)              ---- --->AHL20(2)                    <---------MYB52(1)              --------->ARR14(2)    --------->LBD16 ----ATHB12             <----------DOF2     <---------ETT(1)     --------->ARR11(3)  <---------LBD16   aatcaaactctttctcgtttcatgttctttttttcggtagtaatttccgacagcaagagaaaaacaaaatcttcaaatgggccgatttccggtgaagaag  11927400  Previous    Next  AGI:  At3g30300.1    Description:  similar to EDA30 (embryo sac development arrest 30) [Arabidopsis thaliana] (TAIR:AT3G03810.1); similar to Hypothetical plant protein [Medicago truncatula] (GB:ABN09047.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49224.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 11923677    to: 11926893    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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