Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <------NtERF2                  <-----------RAV1(1)              <---------ANAC58                                                        <xxxxxxxxxxxxxx              <---------ANAC58                                                  <---------ARR14(2)        <---------ARR14(2)                                                      --------->ARR14(2)        --------->ARR14(2)                                                      --------->GLK1(2)    <------NtERF2 --------->MYB52(2)                                           xxxxxxxxxxxxxxxx>smallRNA(i)   <---------DEAR3(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    xxxxxxxxxxxxxxxxxxxxxxx   ------>NtERF2<---------MYB52(1)                                          <------NtERF2<------MYB46(1)  <---------At1g77200--------->ETT(1)       --------->GLK1(2)              <---------DEAR3(2)  <---------DEAR3(1) <---------ANAC46       <---------ARR14(2)            <---------DEAR3(1) -----------HVH21 <---------MYB46(3)        --------->ARR14(2)            <---------At1g77200 >ARR11(3)    <---------ANAC46          <------NtERF2                    xxxxxxxxxxxxxxxx>smallRNA(s) >AGP1  --------->GLK1(2)             <---------DEAR3(1)                <-----------HVH21<------MYB83 -ARR11(3)   <---------TOE2(3)       <---------MYB52(1)   ----------->HVH21------>NtERF2--------->MYB59   ttcgtcggcgaatttgacgtttgtcggagagaacaattcgttggcgaatttgagttttatcggacagaacaattcgtcggcgaatttgagtaggtttgtc  11710600                           ---------->DOF2                        <---------------AGL15       ------->MYC2                       xxxxxxxxxxxxxx                   <---------ICU4                   <-------MYC2                     ---------->DOF2                   -------->HAHB4                   ------->MYC3                    <------ZmHOX2a(1)                   <---------AHL20(2)               <-------MYC3                  xxxxxxxxxxxxxxxxxxx             --------->TOE2(3) ----------->GT1<-----------GT1                     <xxxxxxxxxxxxxxxxxx             --------->TOE1(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              --------->YAB1    --------->DAG2<---------ATHB51       <---------MYB52(1)                     xxxxxxxxxxxxxxxxxxxxx   ---------->DOF2<---------ATHB12      <-------GAMYB                           xxxxxxxxxxxxxxxx>smallRNA(s) xxsmallRNA(i)    --------->ICU4       ----------->GT1                    --------->DAG2  --------->ZAT18 >smallRNA(si3)   <---------YAB1    ------------>MYB.PH3(1)             ---------->DOF2xxxxxxxxxxxxxx   aaaataaaagtgaaaccctaattattcagtaaagggtaagaccgttattttccacgttcgaaggggcaattttcaaaaggctatcaggaaagggcattgt  11710700                                              ----------->GT1                                             <---------WOX13(1)                                            >>>>>>>>>ARR2               ---------->DOF2              <------------CBF              <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------YAB1         <-----------ARR10    ----------->GT1             <---------ARR14(2)                   <---------HSFB2a(2)   --------->DAG2               --------->ARR14(2)  <---------ARR11(3)     --------->ARR11(3) ---------->DOF2--------->DAG2 <---------CCA1(2)   <---------CCA1(2) --------->HSFB2a(2) xxxxxxxxx>smallRNA(i2) <----------DOF2    --------->ATHB12       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxx>smallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <-----------GT1 xxxxsmallRNA(fl3)  <---------ZAT18       <---------YAB1    <---------GLK1(1) xx>smallRNA(le3)   --------->ZAT18    <----------DOF2--------->TOE2(3)    <---------ARR11(3)<------- xxxxxxxxx>smallRNA(si3)<---------DAG2<---------DAG2--------->ARR11(3)  <---------GLK1(2)<---------YAB1   tgcaaaaggttattagaaaaagggcacttttgcaaatctcccttttgattgttatatcttagatttcacctctagaatatcatctcgtattaatatcgac  11710800                                       --------->YAB1                                     <-----------GT1                                   --------->ANAC58                       <-----------HVH21                                               --------->ANAC58                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                          --------->YAB1              <xxxxxxxxxxxxxxxxsmallRNA(s)                                   <---------YAB1   <---------ICU4<-----------GT1   <---------AHL20(2)                      --------->YAB1  <---------ATHB12  ------->GAMYB  --------->AHL20(2)                    <-----------TBP --ETT(2)<-----------GT1   ------>ZmHOX2a(1)                           --------->AHL20(2)     ------>ZmHOX2a(1)   acaaatcattctaaccatataaccccgtcctatgaaattaaacatcattttgtcttagttttataaacttcaaatatttataataagactcgcatcctag  11710900                                                                                  --------->ZAT18                --------->ANAC46                                              --------->LBD16                --------->ANAC58                                              <---------MYB46(3)-----           ----------->ARR10                                                 <---------ANAC46  ------         --------->REM1(2)                                                   <---------ANAC58  ------       --------->LBD16            <------------CBF                           <---------ANAC58  ------      --------->ANAC46           <---------ICU4                             <---------LBD16    ------     ------->GAMYB  --------->GLK1(1)                                ------------>CBF         <------     --------->TOE1(2)   <-----------HVH21                         ---------->ID1 <---------ZAT18     <---------LBD16<---------GLK1(1)                            --------->ALFIN1 --------->ZAT14   -------->P   --------->ANAC58--------->ICU4                 --------->ALFIN1   <---------ZAT14 ---   accctaacccgcgaagactcgcaactccgtcgcaaaaattgctacagaataagttatcgtcgcaagtgtgtcgcaatttgcgggtgaactcagtttcccg  11711000                                                                                      <---------KAN4(2)                                                                              <---------ANAC58                                   <---------ICU4                             <---------ANAC58                                   --------->YAB1                           --------->ALFIN1                                  <---------ATHB12                         ------->MYC2                                  --------->ICU4                           ------->MYC3                            <---------LBD16                                --------->TOE2(2) ---->LBD16                 --------->LBD16                                --------->TOE1(2) --->ANAC58                <---------ANAC58              --------->ANAC58  <-------MYC2 --->ANAC46                <---------ANAC58              --------->ANAC58  <-------MYC3 --->LBD16                 <---------ANAC46              --------->ANAC46 <---------TGA1a --->ANAC58               <---------LBD16           --------->ARR14(2)    =========================== ---LBD16--------->AHL20(2)<---------LBD16    --------->ANAC46            <---------ANAC58 ------->DOF2     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ------>ZmHOX2a(1) <---------ANAC58   --------   caaagccctcataaatttgctacgtttttgcggggaatcatgacttacacacagtttcctcgcaattgtctagcaaacgtgcgagggaaatattcgtcgc  11711100                                                                                         ------>NtERF2                                                                                         <---------DEAR3(2)                                                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                      <------NtERF2                 xxxxxxxxxxxxxxxx>smallRNA(s)                                                     <---------DEAR3(2)         ------>ZmHOX2a(2)                                                     ------>NtERF2             <------ZmHOX2a(2)                                                    <---------At1g77200       --------->AGP1xxxxxxxxx                                                    <---------DEAR3(1)        <---------ARR11(3)                                                xxxxxxxxxxxxxxxx>smallRNA(i)  >>>>>>>>>GATA-2                                                xxxxxxxxxxxxxxxx>smallRNA(s)  >>>>>>>>>GATA-3                                            ------>ZmHOX2a(2)                 >>>>>>>>>GATA-1                                           <------ZmHOX2a(2)                  >>>>>>>>>GATA-4                                          >>>>>>>>>GATA-1                     --------->ARR11(3)                    <--------P            >>>>>>>>>GATA-4                    <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <---------ANAC58          >>>>>>>>>GATA-3                <------NtERF2<-----------HVH21                <---------ANAC58          --------->AGP1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            ---------->DOF2               <---------ARR11(3)           --------->ETT(1) <---------At1g77200        --------->ANAC58                  --------->ARR11(3)           <---------ANAC46 <---------DEAR3(1)        --------->ANAC58                  >>>>>>>>>GATA-2        <xxxxxxxxxxxxxxxxsmallRNA(i)     ----------->HVH21<------MYB46(1)    <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->GLK1(1) ======================bZIP_DOF          --------->GLK1(1)    xxxxxxxxxxxxxxxx>smallRNA(i)<------NtERF2 -->ID1<---------LBD16<------MYB83<---------LBD16 <-----------HVH21 xxxxxxxxxxxxxxxx>smallRNA(s)  xxx   aaaatttgcgacggaatagcgagttggtcatgttccctcggagagatctattcgtcggcgaagaagaggtttgtcggagagatctattcgtcggcgaaga  11711200                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              >>>>>>>>>GATA-2              >>>>>>>>>GATA-3              --------->ARR11(3)              >>>>>>>>>GATA-1              >>>>>>>>>GATA-4              <---------ARR11(3)                                                                    x              --------->AGP1                                                                       xx             --------->GLK1(1)                                                                   <---         <------NtERF2   ------>NtERF2                                                          <----       --------->ETT(1)  <---------DEAR3(2)--------->LBD16                                      -----       <---------ANAC46 <---------DEAR3(1)<---------ANAC46                                     <-----    xxxxxxxxxxxxxxxx>smallRNA(s)   <---------TOE1(3)                                           <----- <xxxxxxxxxxxxxxxxsmallRNA(i)      <---------TOE2(3)                                          xxxxxxx xxxxxxxxxxxxxx>smallRNA(fl3) <---------ARR14(2)                                        <--------ATHB1 xxxxxxxxxxxxx>smallRNA(i)<------NtERF2  <---------LBD16                     <---------YAB1  <-------   agaggtttgtcggagagatctattcgtcggcaaatttgaggtttgcggagagaacaattcttcgtcgaatttgagttttatcagagagaataattcgtcg  11711300       <xxxxxxxxxxxxxxxxsmallRNA(i) <---------ARR14(2) --------->GLK1(2)                      <---------AHL20(2) --------->ARR14(2)                     -------->HAHB4 xxxxxxxxxxxxxxx>smallRNA(i)            <---------ICU4 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ICU4 ---NtERF2<------MYB83                 <---------YAB1             <-----------GT1 -----DEAR3(2)                         <---------ATHB12      <---------MYB52(1) ->NtERF2--------->MYB59               <---------ATHB51     <-------GAMYB ----At1g77200                    ------->GAMYB            ----------->GT1 ----DEAR3(1)      --------->ICU4 --------->TOE2(3)     ------------>MYB.PH3(1)              <------- xxxxxxxxx>smallRNA(s)  ---------->DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxxxxxxxx ----HVH21<------MYB46(1)         --------->TOE1(3)<------ZmHOX2a(1)           xxxxxxxxxxxxxxxxxxxxxx   gcgaatttgagtaggtttgtcaaaatgaaagtgcaaccctaattattcagtgaggataagaccgttattttccacattagaaggggcagttttaaaaatg  11711400                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   ----------->GT1                                                                  <---------WOX13(1)                                                                 >>>>>>>>>ARR2                                                                --------->ATHB12                                                       <---------ARR11(3)             ----------->RAV1(2)                                                       <-----------GT1                <---------At4g35610                                                       --------->ARR11(3)             --------->At4g35610                                                      --------->CCA1(1)             <-----------GT1                                                      --------->RVE1(1)          <---------GLK1(1)  --------->YAB1         ----------->GT1             --------->ARR14(2)         <---------ARR11(3) --ICU4                 --------->DAG2               <---------ARR14(2) <---------CCA1(2)       ----- xxxxxxxxxxxxsmallRNA(si3)    <---------YAB1 <---------DAG2    <---------YAB1   --------->ARR11(3) x>smallRNA(le3)      ---------->DOF2        <----------DOF2<----------DOF2   <---------TOE2(3) <----   gccatcagaaaatggcattgttgcaaaaggttattagaaaaatggcacttttgcaaatatcccttttgattgttatatctaagatttcacctgtagaata  11711500  Previous    Next  AGI:  At3g29796.1    Description:  unknown protein Range:  from: 11711040    to: 11715507    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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