Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->GLK1(2)                           --------->ARR11(3)                           <---------ARR11(3)                             ------->TEIL          <---------------------WRI1              --------->AHL20(2)     <<<<<<<<<<<<<<<<<LFY    <---------YAB1         <---------GLK1(2)  <---------TOE2(3)    <---------ANAC58              ---- -------->TOE1(3)         <---------RVE1(1)   <---------TOE1(3)    <---------ANAC58             ----- ----->DOF2           --------->MYB52(1)      <---------YAB1 <---------YAB1                  --------   aagcttaaaattgaagattagaactaagagattttgtcaatttgatttaagattaaacaaattgtgtttgggtatgcacattggaagtttatgcataccg  11407200             <-----------------AGL3             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           <---------AGP1           --------->ARR11(3)                                                                     <--           --------->ARR14(2)                                                                  ------           <---------ARR14(2)                                                               ---------           <---------ARR11(3)                                                              --------->HSFB2a(2)  <-------GAMYB       ----------->GT1                           --------->ANAC58           <---------HSFB2a(2) ------->RAV1(2)     ----------->GT1                            --------->ANAC46          <---------LBD16 ->NtERF2  --------->AGP1                                       --------->ANAC58   --------->ARR11(3) ->SPL7  ----------->ARR10                                   ------->TEIL         <---------At4g35610   cctgggttgaatagatctgtaaatgggtaaaaaatggattacccatagtgaattgtagttttgaacccgaaaccattcaatttgagctcttgtccggaaa  11407300                            <---------YAB1                           <-------MYC3                           ------->MYC3         <---------AHL20(2)                       <---------ZAT14         --------->AHL20(1)             <<<<<<<<<GT-1      <--------P       <---------ZAT18         <---------AHL20(1)             <-----------GT1 -----TEIL             --------->ZAT14       <---------AHL20(1)           <---------ZAT6 --->GLK1(1)       <-----------GT1           --------->AHL20(1)    --------->ZAT18                <-- >LBD16  <---------AGP1--------->ZAT18      --------->AHL20(2) --------->MYB52(2)                 ---   tacatctggtagaactgagtataactgcacatgattcaattgaaaaatatatatttagtatgacttagttgcactagtattaaccatttacatgtagtat  11407400                                                                                                    <   <------MYB46(1)                                                                                 <-   <------MYB83                       <---------YAB1                          ----------->GT1   <----  --------->MYB59                   <--------HAHB4                        --------->ATHB12      ----- -------AHL20(2)                   <---------YAB1                        <---------YAB1  <---------ZAT6 ------>AHL20(2)<-----------GT1  <---------ZAT6                   <---------REM1(1)<---------YAB1----   ttatttggtacagttgtattaccaattttcatgtagtattattagttatacctatattatacaaataggtgtagtatgattagttatacttgtgttatcc  11407500                                                          --------->YAB1                                                          <--------ATHB1                                                         <---------YAB1                             <                                                         --------->ICU4                             <                                                         <---------ATHB12                           -                                                    --------->CCA1(2)                              <-                                                  <------ZmHOX2a(1)                          <------- ------------CBF      ----------->HVH21         <---------TOE1(2)                            -------- --------GLK1(2)   <---------ARR14(2)           <---------TOE2(2)                          <---------HSFB2a(1) -----HSFB2a(2)    <---------ARR11(3)       <---------YAB1--------->ATHB12   <---------AHL20(2)    <- ---->HSFB2a(2)    --------->ARR14(2)      <-----------HVH21*TSS            <---------AHL20(1)<------ZmHOX2a(2) ----->LBD16      <---------CCA1(2)  <------------CBF------------>CBF   <---------YAB1   ---------->DOF2   agaattgtagtataactagtatatctgacagagtttttgtattgttgtcataggatacaatgatggaaaatgtcatcatatattttagatggaaagatcg  11407600  --------->SPL7                                                 --------->At4g35610             ---- ---------ZAT18                                               <---------GLK1(1)                 ----- ---------SPL7<---------YAB1                                  --------->GLK1(1)             --------- -------->ZAT18              ----------->GT1                 --------->ARR14(2)            <---------TOE2(3) --------ANAC58        <-----------RAV1(2)                   <---------ARR14(2)            <---------TOE1(3) --ARR11(3)<---------YAB1   ----------->GT1                 <------ZmHOX2a(1)              --------->MYB59 ->ARR11(3)--------->ICU4 <------ZmHOX2a(1)             --------->TOE1(2)            ---------->DOF2 --------ANAC58     --------->ANAC46<-----------GT1  ---------->DOF2             --------->At4g35610   agcgtacaacttgatgatgaatacaccaggagggaaaataactctctccatgttagaaagtaggatttgctgaagcttggattagatgaaagtaaggtta  11407700                                                                                                  ---                                                           --------->ICU4                   ---------                                           ==============================HOX2a_HOX2a      <---------At4g35610                                           <------ZmHOX2a(2)                              -----------                                          --------->ARR11(3)      <------ZmHOX2a(1)       --------->At4g35610                        <---------REM1(1) <---------ARR11(3)    <---------TOE2(3)       <-----------RAV1(2) ----->DAG2      --------->ZAT14   ------>MYB46(1)         <---------YAB1          <---------ARR11(3) ----->DOF2      <---------ZAT14   ------>MYB83          --------->YAB1            --------->ARR11(3) -->GT1 <---------------AtSPL8   --------->AtMYB61      <---------ZAT6            <---------CCA1(2)   aagtgcaaatgaagtacaatgcagtgatgttgggaccaactcaagatcatacacattagtgatgatgaggatgtcagtgtctatatatcttcaggtgaaa  11407800                                   <---------ZAT14                                 --------->ANAC46                          <-----------TGA1                         <---------O2                         --------->TGA2(1)                         --------->O2                         --------->ANAC46  <---------GLK1(1)                         --------->bZIP60(1)                        ----------->STF1   --------->GLK1(1)                        <-----------STF1  --------->ARR14(2)                      --------->WRKY12  --------->LBD16                    <-------GAMYB--------->ANAC58                   <---------MYB46(3) <---------LBD16                  >>>>>>>>>>>>WRKY18<---------ALFIN1 <---------ARR14(2)               --------->WRKY38(1) --------->ZAT14   --------->ARR14(2)         ---------->DOF2       <---------ARR11(3)<---------TGA2(1)<---------ARR14(2)   <---------ANAC46--------->YAB1 >>>>>>>>>GT-1 --------->WRKY12  --------->ANAC58   <------ZmHOX2a(1)   ----------->GT1 -------->GT1<----------DOF2  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -->HVH21 --------->GLK1(2)--------->TGA2(2)     <-----------RAV1(2)<---------AtMYB61 >GT1  --------->ARR11(3)<---------bZIP60(1)     <---------LBD16 --------->ALFIN1   tggttaatagatattctttgactgttgacgtcatcactccaccggaattgcccaggaactgtctagagtggaggtcgtcaataaaagttctattggtaag  11407900                                                  --------->YAB1          --------->ANAC46               <-------TEIL                    ------->GAMYB              --------->ANAC58     <---------YAB1     <------ZmHOX2a(1)     --------->MYB46(3)          --------->ANAC58  ---------   <---------At4g35610<---------TOE2(3)       <---------MYB55(2)     <----------ID1        <---------TOE2(3)   aactatgctgatttgggttcaaatgaggatgaaatgagagattatgcaaccatcgtgatgggcgaattggagggacaaggaacagaacaaaatgaggtaa  11408000                                      <---------O2                                      --------->O2                                      <---------ANAC55(2)                                      --------->ANAC55(2)                                   ---------                                      --------->TGA1a                                       <--------                                      --------->ANAC46                                      <--------                                      <---------ANAC46                                      ---------                         ------>ZmHOX2a(1)                                               ----------->RAV1(2)                         --------->LBD16                                                --------->ABI4(1)                       ------>ZmHOX2a(2)                                                ------>NtERF2                     --------->ARR14(2)                                                --------->DREB2C(2)                     --------->AGP1<------ZmHOX2a(2)                                   --------->DEAR3(1)                     --------->ARR14(3)                                                <---------ALFIN1                     <---------ARR11(3)                                                ------->GAMYB           --------->YAB1=================HOX2a_HOX2a                                 --------->DEAR4(2)          <---------YAB1--------->TOE1(2)                  --------->ATHB12         --------->AtMYB61      <--------P     <---------ARR14(3)     --------->ATHB12   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      ==========================================MYC_MYB --------->YAB1             <---------MYB55(2)     <-------GAMYB   <---------ARR14(2)    <---------YAB1 <---------YAB1       --------->WRKY12     <     ===========================================MYC_MYB<---------YAB1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------MYB46(3)<------ZmHOX2a(2)------->MYC3    --------->ICU4 <---------YAB1--------->DEAR3(1)   <---------AtMYB61 --------->ARR11(3)<-------MYC3 --------->ICU4    --------->ICU4<---------ALFIN1- -->GT1<-------TEIL  <---------GLK1(2)<---------TGA1a--------->YAB1--------->ALFIN1--------->MYB46(3)   tagtggaggttgatgatactcaagatcctgagattggatcacgtgatgatagggatgatgatgataggggtgatgaatacgttgaaccaccgcctgctgt  11408100  Previous    Next  AGI:  At3g29595.1    Description:  transposable element gene. Mutator-like transposase family, has a 3.4e-63 P-value blast match to O80466 /172-336 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 11407560    to: 11408766    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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