Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             ------>MYB83                          <-----------GT1                                                    ------>MYB46(1)                          <---------AHL20(2)                                               --------->AtMYB61                     --------->AHL20(1)                                       <-----------ARR10------                    --------->YAB1     --------->AHL20(2)         <---------YAB1          --------->MYB46(3)           --------->TOE2(3)          --------->AHL20(2)         <-----------GT1     --------->TOE2(3)   ctctatagaaaaacatcagtaaacatattaacttgctcaaataaaaaaaaacattcttcaactcaattttcatttcatcaaatctaatctaaaccaacca  11132900                               <---------MYB59                            ----------->RAV1(1)                            <---------DDF1                           --------->DREB2C(2)                           ------->GAMYB                           --------->At1g77200                           --------->DEAR3(1)                           --------->DEAR4(1)                          --------->DEAR3(2)                         --------->MYB52(1)                        <---------ALFIN1                       <---------ABI4(2) --->TOE2(3)           --------->MYB46(3) ---ATHB12             <---------MYB55(2)         <---------MYB46(3) -->MYB46(3)         --------->ARR14(2)       --------->ICU4        ------>MYB46(1) >P                --------->ANAC58           <---------AtMYB61     ------>MYB83 --->YAB1          --------->ANAC58    <----------DOF2 <---------AtMYB61                         <---   taagcttgtaagaaaactgacaagaaccaccgacataactactttgtaatggtggttttggtctgaaaccaaacaagagactcacaagtttgagtttaga  11133000                                                                                           --------->YAB1                                                                                         --------->GLK1(2)                                                                                     --------->LBD16                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                  --------->CCA1(2)                                                    ----------->GT1              <---------AGP1                             ---------->DOF2      <---------ANAC58               <---------ARR14(2)                    ---------->DOF2               <---------ANAC58               --------->ARR14(2)               <----------DOF2--------->DAG2  ---------->DOF2                    <---------ARR11(3)              --------->TOE1(3)           --------->TOE1(3)                     <---------GLK1(1)      ----------->GT1 ----------->GT1     --------->TOE2(3)                    ----------->ARR10 -------ID1   --------->TOE2(3)        <-----------GT1                      <---------ANAC46        -   agacaaaattgataaacctttacaaagaaaaaaaagtcaatttacctgaaaagcttgttaatttcgaaaaccgtcttggagtagatccgagaatcaaaaa  11133100                                                             <---------ANAC46                                                         --------->ATHB12                                                       <---------WOX13(1)                   ---------->DOF2                 --------->YAB1                                <---    --------->AHL20(2)                           --------->GLK1(2)                     <-----------GT1 -------->LBD16  ---------->DOF2             --------->YAB1  ----------->GT1    ----------->GT1  ----   cccagataaattgttcaaacaaagagcgaagaaatatacagaaacaaggagaatcagattgatgggtataaatagggcagaattgtaaattacgatgtaa  11133200                                                <---------At4g35610                                                --------->At4g35610                                       ----------->TGA1                                       ----------->HVH21                                     <------MYB83                        <---------GLK1(1)       --------->ZAT2             <---------HSFB2a(2)     <------MYB46(1)             --------->HSFB2a(2)    <---------TOE2(2)            <---------LBD16         <---------TOE1(2)  <-----------RAV1(2)       --------->GLK1(2)--------->GLK1(1)       <---------ZAT2                             ---------- ------At4g35610       --------->ARR14(2)   <----------CDC5                   ----------->GT1     <-- ----->At4g35610       <---------GLK1(2)  <---------ANAC46                  ----------->GT1--------->ICU4   tctgaagaaattcttggggaagtcagatttccaactcgtaggtgacgcagagctgagtcaggtttttttaagtcttcatggtgaaaattggtaatgacga  11133300  *TSS   --------->ANAC46      <-----------GT1                  <-----------GT1 --------->ANAC58            <------------CBF               <----------DOF2 --------->ANAC58           --------->ATHB12     --------->AHL20(2) ->TGA1--------->TOE2(3)    <---------ICU4--------->ANAC58  <---------DAG2 -------ATHB12   --------->LBD16          --------->ANAC58 <----------DOF2   atcaagaaaccacaaaacccagataaacatttattgccatttgcaagcccttaaattagggcctttttgcccattttctgtttttgtttgaaaaactagt  11133400                                                                      --------->AHL20(2)                                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                               <xxxxxxxxxxxxxxxxsmallRNA(s)                                                             <----------DOF2                                                           xxxxxxxxxxxxxxxx>smallRNA(s)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                          <---------ALFIN1                                                          <xxxxxxxxxxxxxxxxsmallRNA(i)                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                xxxxxxxxxxxxxxxx>smallRNA(s)                                               xxxxxxxxxxxxxxxx>smallRNA(i)                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                         <                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                xx                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxx                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <xxx                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxx                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <xxxx                                             <-------TEIL<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxx                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               xxxxxx                                            <-----------GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxx                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            xxxxxxxxxxxxx                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            xxxxxxxxxxxxx                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------ZAT6 xxxxxx                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------>ZmHOX2a(1)xxxxxxx               --------->AHL20(2)  <---------ARR11(3)   ------>NtERF2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    ----------->GT1                --------->ARR11(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <------   <---------TOE2(3)             <---------YAB1<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     xxxxxxxxxxxxxxx   <---------TOE1(3)  <-----------GT1------>ZmHOX2a(2) xxxxxxxxxxxxxxxx>smallRNA(s) <xxxxxxxxxxxxxxxx   tttttaaggtttaaaatttttatattactgtttttatgatctatatatacatttttgcagccactttgtgaaataaatcctagagttggagtttatttac  11133500                    <---------ICU4                    -------->HAHB4                    --------->ATHB51                    <--------ATHB1                   <---------YAB1                   <---------AHL20(2)                   --------->ICU4                --------->AHL20(2)          --------->ANAC58      <---------ALFIN1    ------>NtERF2--------->YAB1    <xxxxxxxxxxxxxxxxsmallRNA(i) --------->At4g35610--------->YAB1 ---------MYB46(3) <---------ATHB51 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxsmallRNA(i) ----At5g28300 --------->AHL20(2)                           <---------AHL20(2) xxxxxxxxxxxsmallRNA(i)                                  <---------AHL20(2) xxxxxxxxxx>smallRNA(i)                             --------->AHL20(2) xxxxxxxxxxx>smallRNA(i)                 ----------->GT1--------->AHL20(2) xxx>smallRNA(i)<---------AHL20(2)     ---------->DOF2  <---------AHL20(2)      --------->GLK1(2) xxxxxxxxxx>smallRNA(fl3)           --------->YAB1 --------->AHL20(2)           --------->ARR11(3) xxxxxxxxxx>smallRNA(s)          <---------ICU4    <---------AHL20(2)           <-----------ARR10 xxxxxxxxx>smallRNA(s)          --------->ICU4   <----------DOF2             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -----GT1 --------->ANAC58      <---------YAB1<---------ARR11(3)     --------->GLK1(2) xxxxxxxx>smallRNA(si3)       --------->YAB1  --------->ARR11(3)     <-----------ARR10       <------- xxxxxxxsmallRNA(le3)        <---------YAB1   --------->GLK1(2)  <-----------GT1<---------ARR11(3)   agtggctgccactcgcatttaataattgtttttgataattagaaagaaaatctttaaattaaatatttgacaatcttcccaaaatctttccacattaact  11133600                                                <---------ICU4                                            --------->AHL20(2)                                       <---------YAB1                                           -----                                      <---------ARR11(3)                                        <----                                      --------->ARR11(3)                                        <----                                  <---------AHL20(2)        <-----------GT1                    <-----                                 --------->AHL20(2)        --------->YAB1                      ------     ----------->GT1          --------->AHL20(2)<-----------GT1 <---------YAB1               --------     --------->MYB52(2)   --------->LBD16  --------->AHL20(2)<---------YAB1                 <-------- ----GT1      --------->YAB1  --------->ICU4<---------AHL20(2)--------->YAB1   <-----------GT1 <-----   acacgattagttactaaaataaaacttccgaaatatttaatatcatttaattactacaaaattatcatttttgatattgtttttctacatgactataata  11133700                 <xxxxxxxxxxxxxxxxsmallRNA(i)                <xxxxxxxxxxxxxxxxsmallRNA(i)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <xxxxxxxxxxxxxxxxsmallRNA(i)              <xxxxxxxxxxxxxxxxsmallRNA(s)              <xxxxxxxxxxxxxxxxsmallRNA(i)                                    --------->YAB1            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                             <-------TEIL        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                              --------->ATHB12        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                               <--------ATHB1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    --------->YAB1 --------->LBD16      <---------AHL20(2)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->AHL20(2)    --------->AHL20(2) --->HAHB4<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----ATHB1<---------ICU4             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ICU4 -----ICU4--------->YAB1  --------->CCA1(2)            <---------AHL20(2)<---------YAB1 ----YAB1--------->ICU4  <---------ARR11(3)            --------->AHL20(2)<---------ATHB12       <---- --->ICU4<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<---------ICU4   --------->AHL20(1)                 ----- ->YAB1--------->YAB1    --------->ARR11(3) <-----------GT1  <---------AHL20(1)            <---------YAB1 -YAB1<---------YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->ARR11(3)          --------->YAB1 ----ATHB51xxxxxxxxxxxxxxxx>smallRNA(s)--------->AHL20(2)    <---------ARR11(3)         <---------YAB1   attcgattataatcatcaaaccgcagagatattagatagcatttaattactacaaaattaaaaaatatttagacaatgattcataaacatatcataaata  11133800  Previous    Next  AGI:  At3g29160.1    Description:  AKIN11 (ARABIDOPSIS SNF1 KINASE HOMOLOG 11); protein kinase. Identical to SNF1-related protein kinase catalytic subunit alpha KIN11 (KIN11) [Arabidopsis Thaliana] (GB:P92958;GB:P92968); similar to AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) [Arabidopsis thaliana] (TAIR:AT3G01090.3); similar to AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10), protein kinase [Arabidopsis thaliana] (TAIR:AT3G01090.2); similar to AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10), protein kinase [Arabidopsis thaliana] (TAIR:AT3G01090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15027.1); similar to Ser/Thr protein kinase [Lotus japonicus] (GB:BAD95888.1); Range:  from: 11129862    to: 11133302    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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