Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->AtMYB61 -->ZmHOX2a(2) --ZmHOX2a(2) ----AGP1 --->ARR11(3) ------ARR10         <---------ANAC58 ----ARR11(3)        <---------ANAC58                       <-----------RAV1(1) --->ARR14(2) ------->GAMYB                           <-------GAMYB --->AGP1    <------------AtMYB77                    <---------MYB46(3)--------->YAB1 ----ARR14(2)--------->MYB46(3)       <----------DOF2----------->GT1  <---------YAB1 ---CCA1(2) -------->P          --------->YAB1 <---------ICU4       --------->YAB1 --------->YAB1<---   ctagagaccatagcaaccgtctcgcttgagactataaaaacttttctaatattgatggttatatgttgcatcatcataaactataacataataaactcag  11115300               --------->AHL20(1)               --------->AHL20(2)            <---------AHL20(2)            --------->AHL20(2)         <---------AHL20(2)         --------->AHL20(2)        --------->AHL20(2)         --------->ARR14(2)       <---------YAB1              --------->ARR11(3)     -------->HAHB4    --------->YAB1     -------->ATHB1    <--------ATHB1     --------->YAB1    <---------AHL20(2)     --------->ATHB51  --------->AHL20(2)    <------ZmHOX2a(2)     <---------ICU4    <---------AHL20(1)    ==================HOX2a_HOX2a     <--------HAHB4   <---------YAB1   =============HOX2a_HOX2a     <---------AHL20(2)<---------ICU4  ------>ZmHOX2a(1)                --------->ANAC58    --------->ICU4    --------->ICU4 ----------->RAV1(2)                --------->ANAC58    <---------YAB1  <---------ICU4 <---------ARR14(2)               <-----------GT1    <---------ATHB51--------->YAB1 <---------ARR11(3)            --------->KAN4(1)  --------->YAB1 --------->YAB1   --------->GLK1(1)        --------->DAG2 <---------AHL20(2)--------->ICU4 --------->CCA1(1)       ---------->DOF2                   --------- --------->AHL20(2)<---------YAB1 --------->RVE1(1)     <------ZmHOX2a(1)  <----------DOF2  <-------- ------ATHB12 --------->YAB1<-----------GT1<------ZmHOX2a(1)     <---------KAN4(1)       <-----------GT1   tcattaattattaaaaaaataataataattttacaaatatcctgaggatcaacaagtaggaaaaggaatattacaagctttgcaagttttttgaccattt  11115400                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                          <---------ALFIN1                    <---------SPL7                   --------->ANAC55(2)                   <---------ANAC58                   <---------ANAC58                       <---------ANAC58                   --------->ANAC58                       <---------ANAC46                   --------->ANAC58                       <---------ANAC58                  --------------->AtSPL3                  <------MYB46(1)<---------ANAC55(2)                  --------------->AtSPL8                  <------MYB83   --------->ANAC55(2)                  ------->TEIL                           <---------MYB46(3)              <----------DOF2                            --------->MYB55(2)              <---------------AtSPL3                     --------->MYB52(2)              <---------------AtSPL8                     --------->MYB46(2)             <---------ANAC58                            <---------AtMYB61        --------->DAG2  <---------ALFIN1                <---------MYB55(1) ----------->HVH21  <------       ---------->DOF2--------->SPL7                   <---------MYB52(1)<---------ANAC58    <------MYB46(1)    --------->AHL20(2)------->TEIL   <---------YAB1   <-------MYC3       <---------ANAC58    <------- ------>AGL15<---------ANAC58   <----------DOF2       ------->MYC3    <---------MYB52(1)     <------MYB83 -------AGL15<---------ANAC46  <---------DAG2    XXXXXXXXXXXXXXXXXXXX>MIR782          --------->ALFIN1   ggagaattaaaaagtgcttgtacgtaccacacgccttttatgaattgacacaaacacgtttggtgttctaccattacttgacagcaatgtggagtcggta  11115500                 ------->GAMYB              <---------DOF5.7(2)              --------->MYB52(1)             <---------WRKY38(1)                                    <---------MYB52(1)             <---------WRKY12                                       <-----------HVH21             <---------WRKY45                             <-----------GT1          <------MYB46(1)    ----------->GT1         <---------AtLEC2                <-----------RAV1(1)          <------MYB83      <---------------AtSPL8   <---------ANAC58            --------->MYB46(3)      <---------ZAT6        --------------->AtSPL8   <---------ANAC58    --------->ARR14(2) -GAMYB <--------P        --------->YAB1   --------->ATHB12      <---------LBD16 <---------ATHB12 --DEAR3(2) --------->WRKY18(1)           <-------TEIL  <-----------HVH21<---------ARR14(2)       ---   gaattttagagttggtcaacggtagcaaacatggtacaataacatccattggattgcatgtcacatctccggtcggaccttcaaccattgtggctctgat  11115600                                 ------->PIF5                                                      <-                                 ------->MYC2                                                      <-                                 <-------MYC2                                                      --                                 <-------PIF5                                                      --                                 ------->MYC3                                                     <--                                 <-------MYC3                                                     ---                             --------->ZAT2                                                     -----                          --------->At4g35610   ----------->GT1                               <------ ------->DOF2         <-----------HVH21<---------ZAT6                    <------------------------ANAC81   caaagttggagacaattggattactgtcaccagcacgagcagtgtcaatgttgtaaacttcatgtcttacaaattggtttttttttttttggttttaaga  11115700       --------->CCA1(2)    <---------TOE2(3) -------ATHB1 --------ICU4                                                                 <-----------TBP ------->ATHB51                                       <---------YAB1  --------->CCA1(2) ------->ATHB12                                     --------->YAB1   --------->ARR14(2) -------YAB1                                       <---------AHL20(2)<---------ARR14(2) ------>ICU4                *TSS      <---------MYB46(3)             --------->ARR11(1) ---->YAB1                 <---------AHL20(2)      <---------YAB1    <---------ARR11(3) ---TOE2(3)               <---------AHL20(2)----------->GT1          --------->ARR11(3)            --   ataattgagatttgggttttgtttgttttttatttatcgatggtgagagttatattataaatgtagttggagatatggagttttatatggttccatcgtg  11115800                              <--------HAHB4                  <---------ARR11(3)                --------->AHL20(1)                <---------AHL20(1)                <---------ARR11(3)                --------->ARR11(3)               --------->AHL20(2)            --------->YAB1    <---------ICU4                                                        -           <---------ATHB12   --------->ATHB51          <---------YAB1                          -----           --------->AHL20(2)<---------YAB1             --------->ICU4                        <------       ------------>CBF      --------->ICU4         --------->ARR11(3) <---------AHL20(2)<---------AHL20(2)     <---------ZAT6   <---------CCA1(2)         <-------TEIL    ----------->HVH21    --------->AHL20(2) ------>ZmHOX2a(2)--------->ARR11(3)     --------->TOE2(3)    --------->ANAC55(2)    <---------AHL20(2) ------->ARR11(3)<---------CCA1(2)<-----------GT1  <---------CCA1(2)  --------->AHL20(2) --------->AHL20(2)   tgatctagagtcaataaatatatcttatctcattattaactaaacttaaatgcatatcatgtttatgtgacattaatttgttgatatttttttaatttac  11115900                                  --------->AHL20(2)                                     <---------HSFB2a(2)                                  --------->AHL20(1)                                 <---------YAB1                                  <---------AHL20(2)                          <---------O2                                  <---------AHL20(1)                          --------->O2                                 --------->AHL20(2)                           --------->ANAC58       <---------ANAC58          <---------AHL20(2)                       <-----------GT1--------->HSFB2a(2)       <---------ANAC58      --------->AHL20(2)                  ------->TEIL --------->ANAC55(2) -------->AHL20(2)        --------->DAG2                      <---------ATHB12--------->ANAC55(1)   < ---->ANAC55(2)          ---------->DOF2                   <---------WRKY38(1)--------->ANAC58  ----- -----GT1  <---------ANAC46----------->GT1   <---------ZAT18--------->WOX13(1)--------->ANAC46  <----   atattaataggttgcctaaataactagaaaagtaaataaattggttttgcactctatctagtcaatgaatttgaatttacacgtcttatttttggaagtc  11116000                      <---------AHL20(2)   --------->CCA1(2)                     <---------AHL20(2)   <---------ARR11(3)         <---------AHL20(1)           ---------->DOF2         <---------AHL20(2)      --------->ZAT18         --------->AHL20(2)      <---------ZAT18                                     <---------------AGL15 ----------DOF2      --------->AHL20(2)   --------->ARR11(1)                   <---------AHL20(2) ---->ZAT18        ------->TEIL  <---------ZAT14                   <---------YAB1 <-----------GT1 -----ZAT18     <---------YAB1   --------->ZAT14           --------->YAB1     --------->AHL20(2)    -   cactttgacattttatttatgaatttaatatgcagtgcacaaaagatttgaagagtctcaaatataagtatgtttagctattaaataccattttctgaaa  11116100                                                                                         <-----------GT1                                                                                        <---------YAB1                                                                                      --------->ATHB51                              <---------WOX13(1)                                      <--------HAHB4                            <---------ICU4                                            <---------ICU4                            --------->ATHB12                                          -------->HAHB4                           <---------YAB1            ----------->GT1                  -------->ATHB1                           --------->ICU4         --------->ANAC58                   --------->ICU4                         --------->YAB1           --------->ANAC46                   <---------YAB1                        <-------TEIL              --------->ANAC58                   <---------ATHB51                 --------->AHL20(2)              ------->TEIL                     <---------AHL20(2)                 <---------AHL20(2)  ----------------------->TaNAC69(2)           --------->AHL20(2) <---------AHL20(2) --------->ARR11(3)        --------->AtLEC2             <---------TOE2(3) -------->AHL20(2)  <---------AHL20(1)   <-----------GT1             <---------TOE2(3)--------->YAB1<   tattaaataagttagcaaattatatattcatgattgaatattgataccatgcacgtagttaaatctgaattttggttaacatttttaattattactggat  11116200  Previous    Next  AGI:  At3g29152.1    Description:  similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G38170.1); similar to seed specific protein Bn15D80B [Brassica napus] (GB:AAP37973.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 11115289    to: 11115728    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version