Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ARR11(1)                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                           ----------->GT1                                      ----------->GT1                         ---------->DOF2                                       <---------TOE2(3)  <--               ----------->GT1                                               --------->YAB1   -------              --------->DAG2                        ---------->DOF2          <---------ICU4   <------             ---------->DOF2              ----------->HVH21                 --------->ICU4--------->CCA1(2) -------->GLK1(2)     --------->YAB1    <----------DOF2             ---------->DOF2  ---------->DOF2 ->DOF2     <---------ATHB12      <---------------AtSPL8    <---------AHL20(2) <---------YAB1 -------   agaatttttatccaataaagttaaaaataaagaaaaatggtactttgacaccttcaaagaattttttttttaaagagaattatggtataaagatatgaag  11074500                                                          ------>ZmHOX2a(1)               <---------ANAC58                          --------->TOE2(3)               <---------ANAC58                        <---------YAB1      --------------->AGL15                 --------->AHL20(2) -----TEIL     <---------AtLEC2             <---------AHL20(2) -------->AtSPL3                            --------->AHL20(1)                 --------->TOE2(3) ---------AtSPL8                  <---------ANAC46    <-----------GT1       --------->YAB1      <---- -------->AtSPL8                --------->At4g35610<---------GLK1(2)  ------->TEIL        -----------   tacatattctattttttgcatggtttgaaatatgtgctgtagaaaataaaatagattatccttacaaaaatgaatcaataacattagttcaatagtatat  11074600                                                     --------->CCA1(2)                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                ---------->DOF2                                    <-             <---------YAB1                --------------->AGL15                              -------  --------->TOE1(2)                        ========================================================== -----AHL20(2)                         --------->MYB46(3)<-----------RAV1(1)  ----------->GT1<------- >GT1     --------->ICU4    ---------->DOF2<---------------AGL15       <---------AtLEC2      --------   aatacatgggaaatgactattgagaaatacaaaagaattcatccaccattaaaagatatatgttgtgactagtgcatggatagaaaaacaagaatttaaa  11074700                                                                              --------->At4g35610                                                                              <---------At4g35610                                                                             ------>NtERF2                              --------->LBD16                               <---------DEAR3(1)    --------->At4g35610   <-----------HVH21                                 <---------RAP2.3(2)  --------->YAB1         <----------DOF2                                   <---------LBD16 --------GLK1(1)       --------------->AGL15                              <-----------RAV1(1) --->DOF2              <---------------AGL15                            ----------->RAV1(2) ======================================MADS_MADS        --------->AHL20(2)------>ZmHOX2a(1)   <------ --AHL20(2)           <-----------------AGL1<---------ANAC58     <-----------GT1            --------- ->AHL20(2)   <-----------GT1<---------LBD16<---------ANAC58  <----------DOF2<---------RAP2.3(1)-----   gaaatcagaagaatttatacttcttctctttcagggaatacagttttcgtctcaacaaaaaattctttaacaattcctgcggctggacttggactggtta  11074800                     <---------ANAC46                     ----------->GT1                     <---------ANAC58                                                         <------                     <---------ANAC58                       --------->ANAC46                 --------                >>>>>>>>>SARD1                              --------->ANAC58       ------>ZmHOX2a(1)           --------->ANAC55(2)                              --------->ANAC58   --------->ARR11(3)           --------->ANAC58                    --------->DAG2                  --------->ARR14(2)           --------->ANAC58             --------->TOE2(3) <-----------GT1      <---------ARR14(2) --P       --------->ANAC46            --------->YAB1<------MYB83           --------->ANAC55(2) -->GT1------>ZmHOX2a(1)     <-----------GT1  ---------->DOF2  ------->TEIL <---------ANAC55(2)  <--- ------>ARR10   >>>>>>>>>CBP60g    --------->AHL20(2)<------MYB46(1)    --------->YAB1 --------->ZAT6   gaattgctccttcacgaaatttggggtgaatttacaaataaacataaataaagggaggtttcacgaatttttaaaaataagtatcctgatcactaaatat  11074900                                              --------->AtMYB61                                             --------->ANAC58                                             --------->ANAC58         --------->ANAC58             <-----------HVH21             <---------ALFIN1           --------->ANAC46      ---------->DOF2                   <---------ETT(1)              --------->ANAC58 ---ICU4    --------->ANAC58            *TSS------>NtERF2 --------->SPL7          --------->DOF5.7(2) ->ICU4     --------->ANAC46     ------------>CBF       --------->ZAT14           <---------MYB52(1) --------GT1--------->ANAC58  ------>ZmHOX2a(2)       --------------->AtSPL8    <---------ICU4   tacaaaactaaagaacgtcacacagatggtgatcgaacaataccgacacctaaacctctgtaccacaattcgacgcaattcatcgttacccaaaaacctc  11075000                                                                                         --------->ZAT14                                                                                         <---------ZAT14                                                                               --------->LBD16                                                                              <---------HSFB2a(2)                                                                          ----------------------->TaNAC69(2)                        <---------TOE2(3)                                <---------MYB46(3)                      --------->STY1(1)                                  <---------HSFC1(2)                   --------->ZAT6                          <---------TOE2(3)  --------->HSFB2a(2)         <---------HSFB2a(2)                --------->MYB46(3)           <---------HSFB2a(1)         ------>ZmHOX2a(1)     <-----------------AGL1      <---------TOE1(3) <---------LBD16         --------->HSFB2a(2)  <-----------GT1         <---------MYB46(3) --------->HSFC1(2)   tgtttcgattcctagacactctcactagggttttacaactatggcaacgactcgaatggttagggtttcgcaagatggttcgggagattactgctctgtt  11075100                                                                <----------DOF2                                                          --------->TOE1(2)                                                          <---------LBD16                        --------->ANAC55(2)               --------------------->WRI1                       --------->MYB59                   <---------TGA1a                       <---------TOE2(3)                 <---------ZAT2                     <---------MYB52(1)                  ----------->RAV1(2)                    ===============================================bZIP_DOF                 ------>NtERF2                           --------->TGA1a                 --------->ABI4(2)                       ==========================MYC_MYB              <---------ANAC58                    <---------CCA1(2)              <---------ANAC58        <---------ARR14(2) <---------O2                  --------->ANAC58             <---------DEAR3(1)       --------->ARR14(2) --------->O2 --------->ANAC46 --------->ANAC58         --------->ATHB12    --------->ZAT6<---------YAB1==================bZIP_DOF    --------->ANAC46  --------->ANAC46  <----------DOF2--------->HSFB2a(2)   --------->ZAT2           ------->TEIL  --------->ANAC58 <----------DOF2 <---------HSFB2a(2)----------->HVH21   -------->P  ------->TEIL  --------->ANAC58 ================================================bZIP_DOF --------->TOE2(2)  <-----   caagacgcaattgattcggtgcctttaggtaacacttgcagaactgtgattcgtctctcacctgggatttatcggcaacctgtgtatgtacccaagagga  11075200                                  --------->MYB52(1)                                 <------ZmHOX2a(2)                            --------->LBD16                          <---------LBD16                    <-----------ARR10                   <---------ARR14(2)                   <---------GLK1(2)                   --------->ARR14(2)        <---------ANAC46                            <---------MYB52(1)                  <------NtERF2 <---------ARR11(3)                                   --------->MYB52(1)                 --------->LBD16--------->ARR11(3)                                   <---------DOF5.7(2)                --------->LBD16--------->GLK1(1)           --------->At4g35610    --------->ANAC46 -ZmHOX2a(1)   <---------LBD16 <---------GLK1(1)           <---------At4g35610  <-----------RAV1(2)   agaatttcattaccttcgccggaatctcaccggagatcacggttttgacttggaacaatacagcttccaagattgagcatcaccaggtaacgtttgctat  11075300                      --------->ANAC46                     --------->SPL7                 <---------------AtSPL8                                                <---------AtMYB61                 <---------------AtSPL3                                              <---------MYB46(3)                <---------ANAC46                                                   <---------ANAC58                <---------ANAC55(1)                                                <-------GAMYB                --------->ANAC55(2)   ----------------------->TaNAC69(2)           <---------ANAC58                <---------ANAC55(2)<---------ANAC58            --------->ATHB12   <---------MYB46(3)                <---------ANAC58   <---------ANAC58     --------->REM1(2)         <------MYB83                <---------ANAC58   <-------GAMYB     <---------ANAC58             <------MYB46(1)               <-------TEIL       <------MYB46(1)    <---------ANAC46            <---------AtMYB61           <---------------AtSPL3 <------MYB83       <---------ANAC58          <---------MYB52(1) <--           <---------------AtSPL8<---------AtMYB61  --------->ATERF1(1)     <-------TEIL     <-------     <---------ZAT6--------->REM1(2) <---------MYB46(3)<------NtERF2    <---------------AtSPL3 <-----   gttcttagtgtttttggtacgtgtacggctctgatttggttgttttgttttgcaggcgtctagagtcattgggactggtacgtttggttgtggtagtgtt  11075400  Previous    Next  AGI:  At3g29090.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G19730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15020.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 11074940    to: 11076715    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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