Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ----------->RAV1(2)                                                  <---------ZAT2             <---------ANAC46                     --------->ZAT2             <------NtERF2                        --------->At4g35610             ----------->RAV1(2)                  <---------At4g35610            <-----------------------TaNAC69(2)  <-----------RAV1(2)        <-----------GT1    <-----------HVH21                         --------->TOE2(3)       <---------ANAC46           ----   --------->DEAR3(1)                      ------>ZmHOX2a(1)         <------NtERF2               ---- <---------At5g28300           <---------ALFIN1------>ZmHOX2a(1)   <---------DEAR3(1)         ------- -----------GT1           ------->TEIL <---------ALFIN1        <---------HSFC1(2)  <-----------HVH21-   attcaccgtcgagtcgcctgaaaaactgaacctccatctcccctccttcctcagctgagttaagaaacgtcgtcgtataactcgctgtctcgtcttcatt  11049300                                                  <---------ICU4                                               <---------ICU4                                              --------->ICU4                                              <---------YAB1  <---------ICU4                                            <XXXXXXXXXXXXXXXXXXXXMIR414                                            --------->YAB1   --------->ICU4                                           <---------YAB1    <---------YAB1      <---------TOE2(3)                                         -------->HAHB4    --------->YAB1      ---------->DOF2                                         <---------ICU4   --------->ICU4     <----------DOF2                                        --------->ICU4  --------->YAB1     --------->At4g35610                                        <---------YAB1 --------->ICU4      <---------At4g35610                                      <---------ICU4 --------->YAB1       --------------->AGL15                                     --------->ICU4 <---------YAB1      <---------At4g35610      --------->ATHB12          --------->CCA1(2) --------->YAB1       --------->MYB52(2)     --------->ICU4        ---------->DOF2 --------->ICU4 <---------YAB1--------->At4g35610      ---- ----->YAB1             <-----------HVH21--------->YAB1<---------YAB1<-------GAMYB         <---------YAB1 ----->WOX13(1)       <------NtERF2--------->YAB1<---------YAB1    <---------ANAC46      --------->YAB1 -->TOE2(3)         <---------DEAR3(1)--------->YAB1--------->ICU4 <---------ANAC58     <---------YAB1 -------->YAB1  ------>ZmHOX2a(1) <---------YAB1 --------->ICU4    <---------ANAC58<------ZmHOX2a(1)   aatcaaaatgatttgttcctcgtcgtcgtcaaagagatgataatgatgatgattatgatgatgatgatggcgtttgctgcttaaaggattatgatgttta  11049400                                                                                                  ---                                                                                                  <--                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                             --------                                                                                            <--------                                                                                            ------>NtERF2                                                                                           <---------ALFIN1                                                                                           --------->DEAR3(1)                                                                                          --------->ATERF1(1)                                                                                         <---------ATERF1(1)                                                                                         ------>NtERF2                                                                                        --------->DEAR3(1)                                                                                        <---------ALFIN1                                                                                        --------->ANAC46                                                                                       --------->ATERF1(1)                                                                                     --------->DEAR3(1)                                                             --------->GLK1(2)       <---------ALFIN1                                                             <-----------ARR10      --------->ATERF1(1)                                                    ---------->DOF2                <------NtERF2 ----                             ----------->GT1      --------->At5g28300              ------>NtERF2 <---                             <---------MYB46(3)  ----------->GT1                   <---------ATERF1(1)                             --------->MYB52(2)--------->ZAT18             ----------->RAV1(2)-------          <------ZmHOX2a(1)<---------MYB52(1)  --------->LBD16     --------->HSFB2a(2)------>NtERF2 <  --------->GLK1(1)  --------->ZAT2            <---------LBD16     <---------HSFB2a(2)<---------ATERF1(1) ----->ANAC55(2)    --------->GLK1(2)     ---------->DOF2   <---------GLK1(2)------>ZmHOX2a(1)-------   tgtgatttcttaggagaacgagaagctcggtttgttaaaccgctaaatgcgcggtaaagagagattcttctcgataatcctggtccgcctccgcctccgc  11049500      <---------DAG2    --------->LBD16    ------>NtERF2   --------->DEAR3(1)   <---------ALFIN1                                                --------->ALFIN1 <---------ATERF1(1)                                              <------ZmHOX2a(1) ------>ZmHOX2a(1)                                              --------->ALFIN1 --->NtERF2                                                    <------ZmHOX2a(1) -------ATERF1(1)                                            --------->ALFIN1 ----ATERF1(1)                                              xxxxxxxxxxxxxxxx>smallRNA(se3) >NtERF2                                                    <------ZmHOX2a(1) ---ALFIN1                                             --------->ALFIN1 ->ATERF1(1)                    <-------TEIL          xxxxxxxxxxxxxxxx>smallRNA(se3) -ATERF1(1)                     --------->SPL7        <------ZmHOX2a(1) ----->DEAR3(1)               <---------SPL7<-------GAMYB<------ZmHOX2a(1) ------ALFIN1               <---------------AtSPL3  --------->ALFIN1    <------ZmHOX2a(1) -->ANAC46     --------->DEAR3(1)          --------->LBD16--------->ALFIN1                      <---- ---------ALFIN1 <---------MYB52(1)      <---------LBD16 xxxxxxxxxxxxxxxx>smallRNA(se3)         ----- -->DEAR3(1)<---------ALFIN1<---------------AtSPL8 <------ZmHOX2a(1) <------ZmHOX2a(1)        -------   ctcctccgccttctccaccgtctgttttaagaggtacggtgtctccggttgaaggaggaggaggaggaggaggaggacgttgttgtttttgtaggcgata  11049600      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR11(3)    --------->ARR14(2)    <---------AGP1    --------->GLK1(2)    <---------ARR14(2)                                                  <---------ANAC58    <---------ARR11(3)                                                  <---------ANAC58   <------ZmHOX2a(1)                                                ----------->RAV1(2)  <---------HSFC1(2)                                                --------->At4g35610  --------->HSFC1(2)                                   <---------------AGL15  --------->HSFB2a(1)                                 <-----------------AGL2 -----DOF5.7(2)                           --------->REM1(2)      <------ZmHOX2a(2) ---->MYB52(1)     --------->ATHB12 --------->GLK1(2) <-----------------AGL3    <---------GLK1(2) -->DOF5.7(2) <---------YAB1    --------->YAB1     <----------DOF2  <---------At4g35610   acgaaggatctgtttgactattgatttaagagaacgataatccatgtaggcttctttccattcttggatcatctgcgtttcaaattctcttccaaacttc  11049700                      <----------DOF2              ------>ZmHOX2a(2)             <------ZmHOX2a(2)         <------------CBF             --------->At4g35610      --------->ATHB12                                     <---------TOE2(2)            <---------ARR14(2)       --------->ICU4       <---------ARR11(3)               <---------TOE1(2)            <---------AGP1       --------->LBD16          --------->GLK1(2)               ------>ZmHOX2a(1)            ------->TEIL        --------->ANAC46          --------->ARR11(3)             --------->TOE2(2)            --------->ARR14(2)  --------->LBD16      --------->LBD16                  --------->GLK1(2)            --------->GLK1(2)  --------->LBD16      --------->LBD16                   <---------ARR11(3)         --------->ANAC46      <---------LBD16     --------->LBD16                    <---------ARR14(2)        <---------LBD16       <---------LBD16      <---------LBD16                    --------->ARR14(2)  <-----------GT1 --------->GLK1(1)---------->DOF2<---------LBD16              ---------->DOF2   atattttctctacggatctgaattctttttttccccggaaagattggagtttcccgggaaaatctagcaagaacacaagaacaaagaaaatcctatgttt  11049800                                                                                      --------->HSFB2a(2)                                                                                <---------------AGL15                                                                                --------------->AGL15                                                                                <----------DOF2                                                                               <-----------------AGL1                                                                               ======================                                                <---------AHL20(2)             <-----------------AGL3                                               <---------AHL20(2)--------->At4g35610  <---------HSFB2a(2)                                       <------------CBF          --------->ZAT2<-----------------AGL2 <----------DOF2                     <---------YAB1      <-------TEIL  <------ZmHOX2a(2)      -------   ctcctttgtaatctctagtcttttgaattttggttttggattattgttttttattttggttcgtaagagctggatcaagtttctttttctggtaatcaaa  11049900                                     <------MYB83                                     <------MYB46(1)                                     ----------->GT1                                    --------->MYB59                                --------->AHL20(2)                                <---------AHL20(2)                               <---------AHL20(2)                              <---------------AGL15                            <---------AHL20(2)                            --------->AHL20(2)                           --------->AHL20(2)  ----------->TBP        <---------ARR11(3)        --------->YAB1---------->DOF2 =============================================MADS_MADS <----------ID1>>>>>>>>>>GT-3b         <------ --->DOF2------->TEIL    --------->ARR11(3) ----------->GT1     --------->AHL20(2)      <---------ZAT18   gactatatatgtatgtgtgtgtatcaagatttatttatttggtagaaagaaaattataacgagaaataaaagaaaaatagagctattttgtgcattttca  11050000                                                                                <-------GAMYB               <---------ARR11(3)                                              <---------MYB46(3)            <---------DDF1                                                     ----------->GT1           <---------ETT(2)                 <---------ZAT2              <---------AHL20(2)           --------->ETT(2)                 --------->ZAT2              --------->AHL20(1)    <---------YAB1<----------DOF2           <---------At4g35610         --------->AHL20(2)  <---------AHL20(2)                     ------>ZmHOX2a(2)        --------->ANAC55(2) <---------AHL20(2)<---------YAB1      --------->ARR11(3)   --------->AHL20(2)<---------RAP2.6(2) ---YAB1  ---------->ID1             <---------ATHB12   ----------->GT1 <---------AHL20(1)     ------   ttttttatttttgtcgacatctttattagattaactcaaatgatccagcacagaaatattgtttatatatgtaataaaatgcggttgaatacgaatgcat  11050100                                                                                                  <--                            --------->YAB1                                                      <----                        --------------->AGL15                                                  ------                        <---------------AGL15                                                  <-----                     --------->ANAC58                                                          ------                     --------->ANAC58                                <---------AHL20(2)        <-----               --------->ARR11(3)                                --------->AHL20(2)            <-----               <---------ARR11(3)<------ZmHOX2a(1)      ----------->GT1        --------->AHL20(2)----              --------->RVE1(1) ----------->GT1     --------->ARR14(2)    ----------->GT1      <-----  <----------DOF2    --------->AtLEC2               <---------ARR14(2)   --------->ANAC46     <------ ->TEIL       --------->CCA1(1) <----------ID1      --------->ARR11(3) --------->MYB52(1)     <------   tttcctttcatataaaaaatctcatgcaaataataggaaaaacaaaacaaaacaaatcttgtaacatatatataaacggaaaaaaatactaaattcggat  11050200  Previous    Next  AGI:  At3g29060.1    Description:  similar to EXS family protein / ERD1/XPR1/SYG1 family protein [Arabidopsis thaliana] (TAIR:AT2G03260.1); similar to ATP binding / ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G14040.1); similar to EXS family protein / ERD1/XPR1/SYG1 family protein [Arabidopsis thaliana] (TAIR:AT2G03240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68453.1); similar to SPX, N-terminal; EXS, C-terminal [Medicago truncatula] (GB:ABD32751.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23292.1); contains InterPro domain SPX, N-terminal (InterPro:IPR004331); contains InterPro domain EXS, C- Range:  from: 11046227    to: 11049702    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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