Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->LBD16                                   --------->ANAC46                                  ------->GAMYB                                  <---------LBD16                                  --------->TOE1(2)                                -------->P                            --------->ANAC58         --------->YAB1     --------->ANAC58      --------->YAB1        --------->AtLEC2                                                      ---     <---------YAB1 <---------AHL20(2)                                --------->YAB1              <-- -----AHL20(2)      --------->AHL20(2)                 <---------YAB1<-------TEIL            -------- ----AHL20(2)      --------->AHL20(2)   --------->GLK1(1) --------->At4g35610             <------ZmHOX2a(1) --->AHL20(2)  <-------TEIL --------->ANAC46    --------------------->WRI1               <---------YAB1   aatcagtataataagcatacatttaatttcatgcaacccgcgatttctaacctagttatcatctaactacgttcataagcccagtcaaattaggattgaa  11006600                                                                           <---------RVE1(1)                                                                           <---------CCA1(1)                                                                          --------->ARR11(3)                                                                          <---------ARR11(3)                                                                          <---------AHL20(1)           ----------->GT1                                         --------->AHL20(2)          --------->DAG2                                           <---------AHL20(2) <---------------AtSPL8                                           --------->AHL20(2) ------>AHL20(2)  --------->DAG2                               --------->AHL20(2) -------AHL20(2) ---------->DOF2                               <---------AHL20(2) --->GT1 ---------->DOF2           ---------->DOF2            --------->AHL20(2)               ------   ataaatgtacaaaaagtcaaaaagtcttcagtcaattcaaagtcttggtctctcaagttttccatttaataaataagatatttgaattcgaaataacaaa  11006700                                                                                                   --                                                                                              ------>NtERF2                                                                                        ---------->DOF2                                                                                     --------->ANAC55(1)                                                                                     --------->O2  --                                                                                     <---------O2<---                                   --------->YAB1                                    <---------ANAC55(2)                              <---------ATHB12                                       --------->ANAC58                              <---------MYB55(2)                                     --------->ANAC46                              --------->MYB46(3)                 <-----------GT1     ==============bZIP_DOF                      --------->ARR11(3)                      --------->YAB1         --------->ANAC58                      <---------AHL20(1)            --------->TOE2(3)                --------->bZIP60(2)                      <---------ARR11(3)          --------->AHL20(1)                 --------->TGA1a                   --------->YAB1 <---------ATHB12<-----------ARR10          --------->AHL20(2)  ----                   --------->AHL20(2)             --------->ARR11(3)     --------->AHL20(2)  --------             --------->ZAT6  ------>MYB46(1)      <---------ARR11(3)    --------->AHL20(2)   --------      --------->AHL20(2)     -------->P          --------->RVE1(1)      <---------AHL20(2)  ---------     <---------AHL20(2)      ------>MYB83 --------->AtLEC2  <---------YAB1  --------->AHL20(2)------- ---->DOF2 <-----------GT1   --------->ANAC46    --------->CCA1(1)  --------->AHL20(2)<-----------HVH21   agtctatattatttaacacaataatatatccaaccaatgaagacatacaaaatatcttagttattaataactaaataaataaaaaacacgtcaagccgac  11006800       ------>ZmHOX2a(1) ---->MYB46(1) ---->MYB83 ------MYB59                                                             ------>ZmHOX2a(1) ----->AtMYB61                                                     <---------HSFB2a(1) ->RAP2.6(2)                                                       --------->HSFB2a(1) ->DEAR3(1)                                    --------->TOE2(3)   --------->HSFC1(2)             <-- >DEAR3(2)                                 --------->MYB46(3)---------->DOF2       <---------ARR11(3) -->ORA47(1)                    <-----------GT1--------->TOE1(3)   <---------HSFC1(2) <----------DOF2   caaactttcctccaaataagaccaaaaaaactcttaacaattccaacaacgttaagaagaaactaaagaaacttcctatttccaatttcttttcaaacaa  11006900                                             <---------ALFIN1        ----------->TBP                                            ------>MYB46(1)  --------->ARR11(3)                                   <---------ANAC58          <---------ARR14(2)                                   <---------ANAC58   <---------ARR11(3)                               <----------DOF2        --------->GLK1(2)                            <---------ALFIN1------>MYB83--------->TOE2(3)            ---------->ID1------>MYB46(1)   -------->P--------->ARR11(3)       <---------MYB52(2)       <----------DOF2    -------->P       ----------->RAV1(1)   ----------->GT1------->GAMYB-------- ----ZmHOX2a(1)           ------>MYB83    --------->AtMYB61 <---------CCA1(2)  --------->MYB46(3)   ggactctgtcttttgtctctacttgccctaccactttccttgcaccaacacttgaaaatctcaaatcttgtatatatatcaacaaacaaacacaaattct  11007000       --------->YAB1                        <<<<<<<<<TBF1                        ------>ZmHOX2a(1)    --------->WOX13(1)                    <<<<<<<<<TBF1                        ---------->ID1  <---------YAB1 --------->YAB1    --------->ARR11(3)   <----------DOF2       <-----------GT1    <--- ->GLK1(2)      *TSS               <---------ARR11(3)  --------->TOE2(3)   --------->AHL20(2)    ----   atatatcattcataacaaaacataaccatggagtcgaaatcttcttcttcttctctacctttgtttgctctgttcaattttttcctcataagtttttgca  11007100                           --------->YAB1                         <-----------GT1                    <----------DOF2                 --------->ARR14(2)                 ------->TEIL  <---------ARR14(2)                 <---------ARR14(2)              --------->ANAC55(1) <---------ANAC58              --------->ANAC58 --------->ARR11(1)              <---------ANAC55(2) <---------ANAC58                                         -------->P              --------->ANAC55(2)<-------TEIL                                              ------>MYB83              --------->ANAC58 --------->ARR14(2)                                          ------>MYB46(1)              --------->ANAC46 <---------GLK1(2)                                          -----------           <---------REM1(2) <---------YAB1                                        ---------->DOF2 ----------------------->TaNAC69(2)                                             ----------->RAV1(1) ------At4g35610 <---------ARR11(1) ---------->ID1                             <----------ID1 ----->At4g35610<---------CCA1(2)--------------->AtSPL8                  ---------->DOF2 --------->AtMYB61   gatgggtttcttctacacgtatctttttatcaagattcgtccctcttcttcaacatcatcaacgcgttttcgacaaaaagaacaacaaagaccaacaaga  11007200                                           --------->YAB1                                  --------->YAB1          --------->YAB1                                 --------->ICU4 <---------YAB1                                 <---------YAB1 --------->ICU4--------->ARR11(3)                               --------->YAB1 --------->YAB1  <---------ARR11(3)                              --------->ICU4 <---------YAB1  --------->YAB1        ------>MYB83          <---------YAB1 --------->ICU4 <---------YAB1        ------>MYB46(1)     --------->YAB1 <XXXXXXXXXXXXXXXXXXXXMIR414      <---------MYB59      <---------YAB1 <---------YAB1 <---------YAB1   >>>>>>>>>>WRKY62        --------->ICU4 --------->ICU4 --------->ICU4   <---------WRKY18(1)   --------->YAB1 --------->YAB1 --------->YAB1   >>>>>>>>>>WRKY40     <---------YAB1 <---------YAB1 <---------YAB1   >>>>>>>>>>WRKY18     --------->ICU4 --------->ICU4 --------->ICU4                    <------NtERF2  --------->WRKY45    --------->YAB1 --------->YAB1 --------->YAB1         <---------HSFB2a(2)    <--  --------->WRKY12    <XXXXXXXXXXXXXXXXXXXXMIR414--------->YAB1            <---------HSFC1(1)<-------  --------->WRKY38(1)<---------YAB1 <---------YAB1 <---------YAB1          --------->HSFC1(1)-------- >RAV1(1)            --------->ICU4 --------->ICU4 --------->ICU4          --------->HSFB2a(2)<------   gactttgaccaaacaagaagatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatattgatatttctagagaagaggcagagatggtt  11007300    <---------HSFC1(2)    --------->HSFC1(2)          <---------At4g35610   ---------->DOF2   --------->GLK1(2)       --------->YAB1          --------->ZAT14 -------YAB1              <---------YAB1      <---------ZAT14 --MYB46(3)             --------->YAB1        --------->ZAT14 --->GT1          <-----------GT1    --------->HSFB2a(2)                         ---------->DOF2 -GAMYB      <----------DOF2    --------->At4g35610<---------ZAT18    <---------MYB46(3)   atgagaagcttagggcttttttacaacgatgatcagcttcaagaacaatacagtgcaaaagaagtctcgagtttgttcgaagagaaagaagcgagtttgg  11007400                                                                                       ----------->GT1                                                <---------WOX13(1)                --------->YAB1    <                        <---------------------WRI1                               <<<<<<<<<ARR2      -             <----------DOF2             ----------->GT1                         <<<<<<<<<ARR1      <          --------->ANAC58         ---------->DOF2          <---------ZAT6      --------->GLK1(2)   -          --------->ANAC58 <---------TOE2(3)  --------->ATHB12              <-----------GT1         <   aagaagtcaaacaagcttttgatgtgtttgacgaaaacaaagatggtttcattgatgctatagagttacagagagttttgacaatcttagggtttaaaca  11007500  Previous    Next  AGI:  At3g29000.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G39670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15001.1); contains InterPro domain S100/CaBP-9k-type, calcium binding; (InterPro:IPR001751); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Parvalbumin; (InterPro:IPR008080) Range:  from: 11007016    to: 11007651    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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