Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     ----------->GT1                                                                                   <---------YAB1                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               <---------ARR11(3)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                               <---------AGP1                                                                               --------->AGP1                                                                               --------->ARR14(3)                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                     ---------->DOF2                                                                   ====================HOX2a_HOX2a                                                                   ------>ZmHOX2a(1)                                                                   =====================HOX2a_HOX2a                                                             <---------ICU4    <---------ARR14(3)                                                           <-----------GT1     --------->ARR11(3)   -                  <---------At4g35610   <---------GLK1(2) --------->YAB1      --------->RVE1(1)     <                  --------->At4g35610 ------->GAMYB    =================================HOX2a_HOX2a -            ------>ZmHOX2a(2)      ----------->RAV1(1) ================================HOX2a_HOX2a -- ---GT1 ------>ZmHOX2a(1)         --------->MYB46(3)   ------>ZmHOX2a(1)   ---------->DOF2  ---------   aattgttgtcctgatcgaatagctgatcacattccaacaacagaaactcaattagtcctataaacattcctataagcaaaagatcttgataaaaccctag  10990800            --------->ANAC46          ----------->RAV1(1)       --------->ANAC46                                                                            <-     --------->MYB46(3)                                                                            --     <---------MYB52(2)                     --------->ANAC58                                <-------- -------->ANAC55(2)                         --------->ANAC58                           xxxxxxxxxxxxxx ---------ANAC55(2)      <------ZmHOX2a(1)---------->DOF2                            --------->AHL20(2) ---------->GT1      ---------->DOF2  <-----------GT1                          ----------->GT1    --- ------->MYB59--------->ZAT14    <----------DOF2                              ----------->GT1    ---- >TOE2(3)--------->MYB46(3)      <---------DAG2   <<<<<<<<<EIN3       --------->ZAT6 <---------AHL20(2)   ttaagtaacaaaccacagaactcaaaaggattcaactttttttccaaagcaatgtatagataacttaaatcaacactatatgggtaattaaaagattgat  10990900                                   --------->ARR11(3)          --------->TOE2(2)                                   <---------ARR11(3)          --------->TOE1(2)                               ---------->DOF2               --------->ARR14(2) --------->AHL20(2)         --------->ANAC58                 <---------ARR14(2) ---------DOF2              --------->ANAC58                 --------->GLK1(2)                    --- ---->ZmHOX2a(1)   --------->CCA1(2)                         <-----------ARR10                   ---- -WOX13(1)        --------->AHL20(1)                        <---------GLK1(2)                    <--- xxxxxxxx>smallRNA(i2)  ------->TEIL                <-----------GT1              --------->ARR11(3) ------>TOE2(3)   <---------AHL20(2)              <----------DOF2                <---------ARR11(3) -->ZmHOX2a(2)    <---------AHL20(1)<------ZmHOX2a(2)  ----------->RAV1(1)       --------->AHL20(1)   cctttatatacaaaaactaatatatgaatcaagaaaagatcaaagtttgagactttaccacagaatctacgataaatctcgaatatatcgaatcgagcag  10991000                                                                                              -------                                                                                             ------->GAMYB                                                                                            <--------          --------->GLK1(2)                                                                 ---------        --------->HSFC1(2)                          --------->ZAT2                         --------->ANAC58        --------->HSFB2a(1)                         <---------ZAT2                         -------->P    <---------ANAC46                   <----------DOF2                                     ------>MYB46(1) ------>GLK1(2)                      --------->HSFC1(2)                                    ------>MYB83 ----->ARR14(2)                      <---------HSFC1(2)                   ----------->GT1  --------->ANAC58 ------ARR14(2)            ---------->DOF2     <------ZmHOX2a(2)         <-----------------------TaNAC69(2)   aaactggcgaagaatccatggatttgtctaaaagctcgaagcttttcagatcgaagctcgagcgaaatcgaaggaaacgtataaacaaatcccaaccaaa  10991100                        <----------ID1    <---------TOE2(3)                                      <---                        ----------->GT1   <---------TOE1(3)                                      <---               ------------------------>ANAC81                                              <--------              --------->ARR14(2)         ---------->DOF2                              <---------YAB1 --->DOF2     <---------ARR14(2)         <---------DOF5.7(2)                       --------->GLK1(2) -MYB55(2)   --------->GLK1(1)       ----------->GT1                              --------->ARR11(3) >MYB46(3)   <---------GLK1(1)   ---------->DOF2          *TSS--------->YAB1      <---------ARR11(3)   gaaatcgaagttggcaaatcccaaaaacgaaaaaaaaaagagttaaagtttttcacttgcaaaattagaatagaggctctctgagattttgaataaaccc  10991200                                                        <---------AHL20(2)           --------->YAB1                                                       <---------AHL20(2)          <-----------GT1                                                --------->ARR11(3)               <---------WOX13(1)                                                <---------ARR11(3)             --------->ATHB12      <---------AHL20(2)                       --------->CCA1(1)              --------->ICU4        -     --------->AHL20(2)                  --------->AtLEC2                     <---------YAB1    <---- ------DAG2                        --------->GLK1(1)   --------->AHL20(2)   <---------ICU4     <----- -------DOF2                       <---------GLK1(1)  --------->YAB1        --------->YAB1     ------ ---GT1                     <---------YAB1     --------->RVE1(1)           --------->ICU4    <-------   tttttgatttaatcgggcctaaggcccattacaaatgaaatccatgaaaatatctattttaatttgacaaatgcaaaattatgattaacatgatcaagat  10991300                                                 <---------AHL20(2)                                                --------->AHL20(2)                  <---------AHL20(2)--------->At4g35610                 xxxxxxxxxxxxxxxx>smallRNA(i)   <---------AHL20(2)      --------->YAB1                <---------At4g35610      ----------->GT1          <-----------RAV1(1)                     --------->YAB1 -------->YAB1  <---------CCA1(1)   <------NtERF2--------->AHL20(2)   <---------YAB1      ----------- -----YAB1      <---------RVE1(1) <---------DEAR3(1)             ----------->GT1      <---------YAB1 ----ARR11(3)  <---------ARR11(3) --------->ETT(1)           ---------->DOF2   <---------ANAC58 --->ARR11(3)  <---------GLK1(2)  <---------RAP2.6(2)      --------->LBD16     <---------ANAC58 --YAB1        --------->ARR11(3)--------->RAP2.6(3)     <---------LBD16  <---------GLK1(2)   aattgtaatcgtaacaagattttttttttttttttgtcggctaacaagaatttaattccaccggaaagagttattagaatttcgttttatttttgtaaaa  10991400              --------->YAB1                                   <-------TEIL             <---------AHL20(2)        --------->YAB1        <---------ARR14(2)             <---------YAB1          >>>>>>>>>>GT-3b         --------->ARR14(2)            --------->AHL20(2)    ----------->GT1           --------->At4g35610       <---------WOX13(1)     <---------TOE2(3)       <---------ANAC46    <---------YAB1         --------->AHL20(2)       --------->ARR14(2)  <----------DOF2          <---------AHL20(2)       <---------ARR14(2)     --------->AHL20(2) >GT1--------->ATHB12     --------->YAB1            --------->MYB52(1) <-------TEIL   tagtctttgattgatataatagtcggaattttaatgaagaaaaataacttcaagtatcgggcagattcatatgtgcataaaatgtgtattgtttttttgt  10991500                                                            <---------AHL20(2)         --------->GLK1(2)                                                         <---------ICU4               --------->ARR11(3)                                                   --------->YAB1                     <---------ARR14(2)                                                  <---------YAB1            <-----------RAV1(1) -----        --------->YAB1           <---------ANAC55(2)    --------->ICU4------>MYB46(1) --------->ARR14(2)        -------->HAHB4           --------->ANAC55(2)  --------->YAB1  ------>MYB83    <---------GLK1(2)       --------->ICU4  ----------->HVH21        ----------->GT1     <---------MYB59 <---------TOE2(3)       <---------YAB1--------->ANAC55(2)      <---------GLK1(2)  <-----------GT1    ----------->ARR10   atgtgtgtaatgatacttagtttatgtgacacaacatgtaatagtatagattgtgataatatttattctaccaaatatttgtggctaagattctcgtttc  10991600                                                 <---------AHL20(1)                                          ----------->GT1                                      <---------AHL20(2)                                      <--------HAHB4                                      --------->YAB1                                      -------->ATHB1                                      -------->HAHB4                                      --------->ATHB12                                      <---------ICU4        ----------->GT1                                      --------->ATHB51     ----------->GT1                                     --------->ICU4--------->AHL20(1)                                     <---------ATHB51     <---------TOE2(3)             -------------                                     <---------YAB1--------->AHL20(2)                   <------------                                  --------->AHL20(2)      <---------TOE1(3)        <---------ANAC58                                  <---------AHL20(1)    ---------->DOF2            <---------ANAC58                                  <---------AHL20(2) --------->YAB1                xxxxxxxxxxxxxxxxxx                            ----------->GT1      --------->AHL20(1)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    ---------->DOF2    --------->ATHB12 <---------YAB1 <---------YAB1        <---------YAB1 ---->YAB1    ----------->GT1     --------->AHL20(1)<---------YAB1         --------->ZAT6   ataaaacaaagaaatttagttaaatcgattgggtaattaattattagtaaaaatattataaaggttaaataagtttatcactatagcttacaataagtgg  10991700  Previous    Next  AGI:  At3g28970.1    Description:  AAR3 (ANTIAUXIN-RESISTANT 3). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14997.1); contains InterPro domain Protein of unknown function DUF298 (InterPro:IPR005176); contains InterPro domain Defective in cullin neddylation (InterPro:IPR014764) Range:  from: 10989024    to: 10991158    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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