Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ---------->DOF2     --------->AtLEC2  <------NtERF2 -------->ANAC58 ---------ETT(2)                                                  <---------GLK1(2) -------->RAP2.6(2)                                        --------->LBD16 -------->ETT(2)                                          --------->LBD16          --------->DEAR3(1) -------->ANAC58                                         <---------LBD16          <------NtERF2------ ------DEAR3(2)        <---------ATHB12<---------ICU4    --------->LBD16         ------>NtERF2 ------ --->ATERF1(1) <---------ANAC58       <---------ATHB12  <---------LBD16    <---------GLK1(2)<------ZmHOX2a(2) -NtERF2       <---------ANAC58       <------ZmHOX2a(2) --------->TOE1(2)<---------YAB1    --------->ARR11(3) --->HVH21 <---------ANAC58 --------->YAB1       --------->At5g28300     --------->ICU4   <------ZmHOX2a(1) --DEAR3(1)<---------ANAC58 --------->TOE2(3)   ----------->GT1 --------->ICU4  --------->ETT(2)  <--   ggtcgccatgaaagcttgtttgccattcaatctcaatccgatcatttcgatggtaaaacccgggaaaagattgtgaagattgtcgccctcgaggatcaag  10986600                                                         --------->LBD16                  --------->GLK1(1)                                                        --------->LBD16                  <---------ARR14(2)                                                <---------GLK1(2)                    --------->ETT(1)     --------->REM1(2)                         --------->YAB1         <---------ANAC58   --------->ARR14(2)    --------->ALFIN1                           <--------ATHB1     ------>MYB83       <---------ANAC46   --------->LBD16                            <---------YAB1      ---------->DOF2    <---------LBD16< --->ANAC58                           ----------->HVH21<---------LBD16<---------ANAC58 <------NtERF2< --->ANAC58                  <---------AtLEC2 --------->ICU4<---------ETT(2)    ------>ZmHOX2a(1)  <- -------GLK1(1)             <-------TEIL      <---------ATHB12    ------>MYB46(1) <-----------RAV1(1)   aaacccgtggtgactagatagagctctaggtgcatgaagactgacacaatgattcttcccggtctaccaaatgcgcgttctcctatgtcgggatatgttt  10986700                                                         <---------RAP2.6(2)                                                      <---------ARR14(2)               <-------TEIL                           <---------MYB52(1)           <------NtERF2                              --------->ARR14(2)                            -           --------->LBD16                           <-------GAMYB                                  -          --------->ANAC58                          <---------MYB46(3)                             <-          --------->ANAC58                          <---------DEAR3(2)                             --        --------->PCF5                             <---------DEAR3(1)                         ------>ZmHOX2a(1)       <---------SPL7                            ------------>AtMYB77                      ------>MYB83     <---------ANAC58                      --------->REM1(2)     ----------->GT1           ------>MYB46(1)     <---------ANAC58                     --------->ALFIN1      <------ZmHOX2a(1)        ------->GAMYB -----------RAV1(1)                   <------ZmHOX2a(1)  <---------ANAC46     ---------->DOF2-------- ---------REM1(1)                   <---------TOE2(3)<-----------HVH21   --------->DAG2  --------->AtMYB61 --------TOE2(3)--------->YAB1--------->ICU4     ------------>MYB.PH3(1)---------->DOF2 --------->MYB46(3)   tgatgttgcggtccgcattcatacattttgtaatgagtaaggatgtgtagaaggcggttacggctaggagtaacaaaagtgaaagactcaaccatcctcc  10986800              <---------SPL7         <---------ARR14(2)                         --------->TOE2(3)   --------->YAB1    ----------->GT1                                 --------------->AGL15  <---------AHL20(2) -------->ANAC58      --------->YAB1         --------->AHL20(2)      --------->TOE2(3) -------->ANAC58  ----------->GT1      --------->ANAC58            <-------TEIL ------PIF5 <---------------AtSPL3     --------->ANAC58        --------->ARR11(3) ----->PIF5 <---------------AtSPL8   ---------->DOF2<---------------AGL15 --------->AHL20(2)  ------>MYB46(1) ->ANAC46--------->ARR14(2)         ------>ZmHOX2a(1)        <---------ZAT6--------->AHL20(2) ------>MYB83   acgagcaagtgaatatggtaccgataatattccaattcctaaagcaattcaataccctaattagtgatattcattaataaataagtctatcgaaccaaat  10986900                                                                        --------->O2                                                                        <---------O2                                                             <---------ETT(1)                                                             ----------->HVH21                                                            ------>ZmHOX2a(2)                                                           --------->CCA1(2)                                                           --------->ARR14(1)                                                          --------->ARR11(3)                             <-------GAMYB                --------->ARR11(1)                            <---------ANAC58              <---------ARR14(2)                            <---------ANAC46              --------->ARR14(2)                        <---------ANAC58                  <---------ARR11(3)                        <---------ANAC46                 <---------GLK1(1)               --------->ARR11(3)             ---------->DOF2<---------ANAC58            ----------->ARR10         <---------ANAC58          --------->TOE1(3)--------->ZAT18      ---------->DOF2     <-----------HVH21    <---------ARR11(3)        ------->TEIL    <---------ANAC58    ---------->DOF2<------ZmHOX2a(2)      <---------ANAC58   aagaaatatgaacctgaaagagcattgagtgcgttgaaacatgttttaaagaaagatgaagatccgacattgtcacgttgtatttcttggttatcttctt  10987000                                                 <---------YAB1                                               <---------ICU4                                              --------->ICU4                                              <---------YAB1                                            <---------ICU4                                            <--------HAHB4                                            --------->YAB1                                           <---------YAB1                                         --------->YAB1                                         <---------ICU4                                        <---------YAB1            <---------LBD16                                       <---------ARR11(3)   --------->ARR11(3)                           ----------->GT1 --------->ICU4   <---------GLK1(2)             <---------ICU4                  --------->YAB1       --------->ARR11(3)   <---------ARR11(3)           <---------ATHB12               --------->YAB1         --------->YAB1  --------->DAG2              ---------->DOF2<---            <---------------AGL15    <---------YAB1  ---------->DOF2  ---------->DOF2    ------------   ccatagctaatgacctctaataagaaaaatggagaaactatgatcatcattatgaaaaagtagatttttggggaaagaagagaagaaagaaatcaataca  10987100                                                                             <---------AHL20(2)                                                                          <---------AHL20(1)                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                     <---------ZAT6                       --------->AHL20(1)                 --------->ANAC58  --------->MYB52(2)                  --------->AHL20(2)             --------->YAB1    <---------MYB46(3)                      --------->YAB1             <--         ---------->DOF2    <---------ANAC46   <---------WOX13(1)   --------->YAB1          <--------        <---------AHL20(2)  <---------ANAC58  <------------CBF    ------------>CBF      <---------ANAC58 ----------->GT1 --------->ANAC58  ----------->GT1               ----------->RAV1(1)    <---------ANAC58 ------At4g35610 --------->ANAC46<--------P  --------->ATHB12   --------->ANAC46    <----------DOF2 >CBF  <---------AHL20(2)   <---------ANAC58<---------AHL20(2)--------->ANAC46   <-----------GT1 <---   gttgagtaatttaaagcataagcaagagaagcgtggttagtgatatttgattgagactactaatacacaacaataatattttataactttgcttagctta  10987200                                                       ------------>CBF                                                      --------->ANAC58                                            ------>MYB46(1)                                            -------->P--------->ANAC58                                            ------>MYB83                                           --------->MYB55(1)                                          <---------MYB111(1)                                          <---------MYB46(2)                    --------->ANAC58      <---------MYB111(2)           --------->TOE2(3)           - ---------GT1       --------->ANAC58      <---------MYB59    <-----------GT1              ----------- -At4g35610       ---------->DOF2        <---------ANAC55(2)--------->AHL20(2)          <---------ANAC58 ------YAB1   ---------->DOF2 --------->ZAT14     <-----------HVH21   --------->GLK1(2) <---------ANAC58   ttactacttctcaaaaaaaagaaagcaaactctaaactcgattacctaccctagtcacacaattaacttgataatctcaaaatttccaaggcttgttaca  10987300                                                        <-------TEIL                                                    <---------------AtSPL8                                                   <---------ANAC46                                                --------->CCA1(2)                 ----------->GT1           --------->TOE1(2)--------->ARR11(3)  <---------GLK1(1)        <---------ANAC55(2)    --------->AHL20(2)      <---------ARR11(3) --------->ARR11(3)     <------ZmHOX2a(2) ---------->GT1    <---------AHL20(2)    --------->ARR11(3)          <---------ARR11(3) >GT1    <-------TEIL      <---------CCA1(2)   <---------ARR11(3)    --------->ARR11(3)       -------   catagaaaaaatacatgggatttttttttatatctctaactaagctctagatatcgggtacagaaatgagagatcacataaacattgaaaaaaaaaactt  10987400                                                            ----------->GT1                                                          <---------ARR11(3)                               ------>MYB46(1)          <---------YAB1                               ------>MYB83           --------->YAB1                     ---------->DOF2                             <---------MYB59     <----------DOF2                   --------->ANAC58     <---------LBD16  ---------->DOF2         --------->ARR11(3)                   --------->ANAC58   ------->TEIL   <---------TOE1(3)           <---------ARR11(3)                   --------->ANAC46 -->TOE2(3)       <---------TOE2(3)           --------->GLK1(2)         --------->MYB52(1)   aaatgtacctggaaattgttagggtaaagaaccaaattcaaaacccaaaatctttatcaagatagtagaaaacaaaacagaacacaagccccaaagtcaa  10987500  Previous    Next  AGI:  At3g28960.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT5G15240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14974.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 10985482    to: 10987004    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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