Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ANAC58                                                      <---------ANAC58                                                   <---------DEAR3(1)                                                  --------->ATERF1(1)                                                 <---------MYB46(3)                                                <---------AtMYB61                                                <---------DEAR3(1)                                                --------->ALFIN1                                              <---------MYB46(3)                                             --------->ALFIN1                                             <---------DEAR3(1)                                           <---------MYB46(3)                                           xxxxxxxxxxxxxxxx>smallRNA(i)                                          <---------DEAR3(1)                                        <                                          <---------AtMYB61          <---------MYB52(1)            <-                                          --------->ALFIN1          <-------GAMYB                ----                                        <---------MYB46(3)         --------->ANAC55(2)           <---                                       <---------AtMYB61           <---------ANAC55(2)         <----- ------ARR14(2)                        --------->ALFIN1            <---------ANAC58           <------ ----MYB46(3)                       <-----------RAV1(1) <-------GAMYB<<<<<<<<<MYB98          <------- -->ALFIN1                          --------->ALFIN1  <---------ANAC46                    <---------At4g35610 -O2                                <---------AtMYB61<------NtERF2 <---------ANAC58 <------MYB46(1)-- -ANAC46                 <-----------RAV1(1) <---------AtMYB61<---------ICU4        <------MYB83 <--- >O2                   <----------DOF2 <---------DEAR3(1)    <---------YAB1---------->DOF2<---------ZAT2   ttcttgagacattctttgtaagtgactttgttgttgttgtggtggtggtggtggtggcgtttgatgattccgttactgaaagagattggtttagctggtt  10942700           <---------HSFC1(2)           --------->HSFB2a(1)           --------->HSFC1(2)       --------->ETT(1)   --------->LBD16 ------>ZmHOX2a(2) <---------LBD16 ------ZmHOX2a(2) --------->ARR14(2) --------ARR14(2) <---------GLK1(2) ------->ARR10 <---------ANAC46                         ------>ZmHOX2a(2) ---MYB46(1)  <---------LBD16                           <---------MYB59<----------DOF2 ---P<-----------HVH21                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -GAMYB<---------DEAR3(1)--------->ARR14(2)   --------->ARR14(2) --------->ANAC58 --MYB46(3)<---------HSFB2a(1)                <---------ARR14(2) --------->ANAC58 ------->ARR14(2) <---------ARR14(2)<XXXXXXXXXXXXXXXXXXXXMIR861-3P --------->YAB1    <---------AHL20(2) ---MYB83<------NtERF2   <---------ARR14(2)  <---------CCA1(2)   --------->ANAC46<---------AHL20(2)   ggatccgggtcggagtttcggattcgggttctggtgattttggagtcatatccattgatctaacttcaagcatctttatgtttttattttcttgaaaaaa  10942800            <---------TOE2(3)            <---------TOE1(3)      --------->AHL20(1)      --------->ICU4      --------->ARR11(3)      <---------------AGL15      <---------ARR11(3) <---------At4g35610      <---------AHL20(1) --------->At4g35610   --------->AHL20(2)   <---------TOE1(3) --------->ANAC58       <---------TOE2(3)                                             --------->AHL20(2) --------->ANAC58  <---------YAB1       ---------->DOF2                 ----------->GT1<---------AHL20(2) ----------->GT1  <---------TOE2(3)---------->DOF2              >>>>>>>>>TBF1 ---------->DOF2  <-----   atcaagaaaatattagggtttatgttaagcttacaaaaaaagaaaagtttgatattgagaaatgaagaagaagatggataaaaagagattaaatcaactt  10942900                                                                                            <--------                                                                                 --------->At4g35610                                                                             --------->GLK1(2)                                                                             --------->ARR14(2)                                                                             ------->TEIL<---------MYB46(3)    <------ZmHOX2a(2)                                                --------->YAB1     <---------WOX13(1)   <---------ARR11(3)        --------->AHL20(2)                      XXXXXXXXXXXXXXXXXXXX>MIR417<----   --------->ARR11(3)      <---------TOE2(3) <------ZmHOX2a(1)      <---------YAB1      <--------P -----DOF2         --------->ICU4     <----------DOF2  ----------->GT1       <---------ARR14(2)------   ttgaagatcatgttttttgtaataagtttaagaaaataaactttagaggaagaagatgtgttataagatgatgatagtgaatctgctctggttgatgaat  10943000                                                                         --------->AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                      <---------AHL20(2)                              *TSS                     <---------AHL20(1)                            --------->AHL20(2)                     --------->AHL20(1)                            --------->AHL20(1)                     --------->AHL20(2)                            <---------AHL20(2)                     <---------AHL20(2)                            --------->ARR11(3)                  --------->AHL20(2)                               <---------AHL20(1)                  <---------AHL20(2)        --------->TOE2(3)      <---------ARR11(3)                  --------->AHL20(1)       ----------->GT1        --------->AHL20(2)                 <---------AHL20(2)    <---------AHL20(2)      <---------AHL20(2)                 --------->AHL20(2)--------->CCA1(2)           <---------ICU4      <------ZmHOX2a(1) -YAB1       --------->AHL20(2)   --------->ARR11(3)          --------->AHL20(2)  <----------ID1 -------RAV1(1) <---------AHL20(1)<---------ARR11(3)        --------->YAB1     ---------->DOF2   ---- ->TEIL      <---------AHL20(2) ----------->GT1   <---------AHL20(2)<---------AHL20(2)           <---   gttgctaagagagaataaaataatttaatagggagagatataaaaatgttaataaatgtgaataataaatatatttaaaataaaaggacagagcttgaag  10943100                                                             <---------PCF2            --------->AHL20(2)                                     ----------->GT1         --------->TCP20          --------->AHL20(1)                 <------MYB83       <---------YAB1           --------->TCP15(1)       <---------AHL20(1)            --------->DAG2     <-----------GT1            --------->ALFIN1           --------->AHL20(2)          ---------->DOF2 --------->ATHB12             --------->DAG2           ----------->GT1     < ----->ARR11(3)  <------MYB46(1)    <---------TOE2(3) ---------->DOF2        --------->ALFIN1      -- ------ARR11(3)<--------P<---------YAB1          ----------->GT1           --------->ALFIN1   -------   atgtttaacagagaaaggtagggtttgatgatttaactatggttaaatgtatggttaaaagtgggacctgtaatagggagtggggaaatatatatagagt  10943200                                     <---------YAB1                                   --------->AHL20(2)                                   <---------AHL20(2)                                  <---------YAB1                                  --------->ICU4                                --------->YAB1                               <---------YAB1                               --------->ICU4                              --------->AHL20(1)                              --------->AHL20(2)                                             <-------                             --------->YAB1                                                  <-------                            <---------ATHB12                                              <---------- ---------AHL20(2)          <---------ATHB51                                          <----------DOF2 ------->ICU4  ---------->DOF2<---------AHL20(2)                                  <---------ANAC58 ---->GT1    --------->TOE2(3)<---------AHL20(1)     ----------->HVH21            <---------ANAC58   aataaatgtcttaaacctaaagacagtccaattataattaatattctcatgcattgtgacacttcttgtttttttttgaagttggcttctttttacttta  10943300                                                                     ------>MYB83                                                                     ------>MYB46(1)                                                                 --------->MYB52(1)                                                                <-----------GT1                                                          ----------->GT1  <----------DOF2 --DAG2             --------->AHL20(2)                  --------------------->WRI1 ---DOF2        ----------->GT1                      --------->YAB1<---------MYB59                  - -GT1    ---------->ID1   <---------YAB1       >>>>>>>>>>WRKY63 <<<<<<<<<GT-2    ---------->DOF2    -   ttctaatatttgttccttctgttaaaatatgtttagcattttgtatatttgactattacaatgtaattaccgaacaactttgtaaaagtttacttatact  10943400                                                                                              -------                                                                                              <------                                                                                       --------------        <---------YAB1                                                                 <-------------      --------->ATHB51                                                                ---------------      -------->ATHB1                                                            <---------RVE1(1)     <---------YAB1                          <---------AHL20(2)                 <---------CCA1(1) <---------ANAC55(2)                         --------->AHL20(2)                --------->ARR11(3) <------MYB46(1)                        --------->AHL20(1)           ---------->ID1   --------------- --------->ANAC55(2)                   --------->AHL20(2)       <---------MYB52(1)    --------------- <------MYB83                          --------->YAB1  <---------ANAC55(2)     <---------ARR11(3) -------->MYB111(1)            <-----------GT1   --------->AHL20(2)<-----------RAV1(1)--------------- -------->MYB59 --------->AHL20(2)   --------->AHL20(2)--------->ANAC55(2)     <---------GLK1(2)   attaggtattattgtaaactaaatagttgtttttcacaaaataatattaaaaaaaatacttattctgttttgttgtttaaagattttttccaaaataagt  10943500                                                                       <--------ATHB1                                                                       --------->ATHB51                                                                       <---------ICU4                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)<---------AHL20(2)                                                                    --------->YAB1   --------->AHL20(2)                                                                  --------->AHL20(2)--------->AHL20(1)                                                                  <---------AHL20(2)<---------ARR11(3) -->ANAC55(2)                                                  --------->AHL20(1)   --------->ARR11(3) ---ANAC55(2)                                           <---------AHL20(1) --------->AHL20(2) ->AGL15                                    <------MYB83--------->AHL20(2) <---------AHL20(2) --AGL15                            ------->TEIL        --------->AHL20(1)<---------AHL20(2)    <---- -->AGL1             <---------ARR11(3)     <------MYB46(1)    <---------AHL20(1)<---------AHL20(2)-- -->AG               --------->ARR11(3)  <---------MYB52(1)  --------->AHL20(1)  --------->AHL20(2)<- -->AGL3       ----------->GT1   <---------YAB1    --------->AHL20(2) --------->ICU4<---------AHL20(1) -->AGL2   <---------YAB1  ---------->DOF2 --------->MYB59   <---------AHL20(1)<---------AHL20(2)  <-   attgttctaaattttcaatgtaaaatctataaagtatgaatcagtttggtttttaaaatataatatatattaataatttatataaaaatatttaaaacga  10943600  Previous    Next  AGI:  At3g28920.1    Description:  ATHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34); DNA binding / transcription factor. similar to ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G39760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14979.1); contains InterPro domain Homeobox domain, ZF-HD class (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region (InterPro:IPR006456); contains InterPro domain Homeodomain-related; (InterPro:IPR012287) Range:  from: 10941683    to: 10943070    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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