Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ICU4                                                          <---------ATHB12                                              ------->GAMYB--------->YAB1     <---------ARR11(3)                       --------->AtMYB61           --------->ARR11(3)     --------->ARR11(3)                     --------->ANAC58              <---------ARR11(3)    <---------CCA1(2)                       --------->ANAC58              --------->GLK1(2)        -- ----DOF2                                 --------->MYB46(3) ----------->TGA1          ---------->DOF2 --GT1 --------->TOE2(3)       <---------YAB1--------->MYB46(3) <---------ANAC46 --------->SPL7<-----   tcttctatatcttaaaaaaaaaaactattcgttttgataaaaaaacaaccaaaacagcaaatcatgacgcagagaaaatctcgttcgtcaaaagaccctt  10912000               <-----------GT1             <---------YAB1                                                        --------->WOX13(1)           --------->YAB1                                                         --------->AHL20(2)           <--------HAHB4                                                         <---------AHL20(2) <---------AHL20(2)                                                      --------->YAB1 ---------->DOF2 --------->AHL20(2)                                                     <---------TOE2(3) ------->TOE2(3)  ---------->DOF2                                       <---------YAB1--------->YAB1 -----DOF2<---------YAB1           --------->ANAC46           --------->TOE2(3)  <---------ATHB12   tcattaatttctattattaacaaagcctatgcaatacacataaatgcaatagccactattcaattcttaaaattatcgtagcaataaatcaaaagtgaga  10912100                                                                                                   <-                                                                                              -------                                                                                         <---------YAB1                                                                                       -------->ATHB1                                                                                       <---------ICU4                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                      <---------ATHB51                    --------->YAB1                                                    --------->ICU4-                   <---------YAB1                                  <---------ICU4  <---------AHL20(2)          <---------CCA1(2)      <---------YAB1                 --------->YAB1     --------->AHL20(1)        --------->YAB1    --------->YAB1         <---------ICU4<---------AHL20(2)  --------->AHL20(2)     <---------GLK1(1)   <---------YAB1------->TEIL           --------->AHL20(2)   <---------AHL20(1)     --------->GLK1(1) <---------ICU4 <---------AtLEC2        <---------AHL20(2)  --------->AHL20(2)-    <---------ARR11(3)<---------YAB1--------->AtLEC2  <----------DOF2    --------->TOE2(3)  <--------    --------->ARR11(3)--------->ICU4<---------YAB1 <---------YAB1  --------->YAB1 <---------ATHB12 <-   gagggagatatcatatcatatatcattatcatgttatcatgcatgtccccattattctttattttttaataataacataaaccaataaattattaaaccc  10912200      <---------AHL20(2)                                               <---------AtLEC2   --------->AHL20(1)                                             <---------ARR14(2)   <---------AHL20(1)                          <---------ALFIN1   --------->ARR14(2) --------ATHB51                                ----------->RAV1(1)<---------MYB52(1) -->ANAC46                             --------->ANAC58       ------->MYC3                         == -------->AHL20(2)                     --------->ANAC58       <-------MYC3                         -- -------->YAB1           <---------TOE2(3) --------->ANAC58  --------->ANAC46             ---------->ID1 ---GT1                  <---------TOE1(3) --------->ANAC58  <---------O2              <----------DOF2 --------ATHB12  <---------ZAT6   ---------->DOF2            --------->O2   <---------ANAC46 <-------   aataatattttttttgtttgtgttattagggtttttgaaagaagcaagcccacattgaatgccacgcggttttgtatggagggtagagacttttcctttt  10912300       ----------->HVH21     ----------->RAV1(2)     --------->ZAT2     <---------ZAT2     --------->At4g35610     <---------At4g35610 <---------ALFIN1                                                        <---------AHL20(2) --------->ANAC46              <---------DAG2                           --------->AHL20(2)      ----- ================RAV           <----------DOF2                          <---------AHL20(2)      ----- --------->RAV1(1)  <----------DOF2                        --------->AHL20(2)<-----------GT1  *TSS ---DOF2   <----------DOF2  <---------ALFIN1  <----------DOF2     <----------DOF2  ------------>CBF   gccacacagctgactttggaggctttacctccacttttgtagttaatgctttacacattttttatatacttttatttattatctatacaatttgagagac  10912400                                                                                             --------                                                                                             --------                                                                                        <------NtERF2                                                     --------->AHL20(2)                ------>NtERF2                                                   <---------AHL20(2)              <-----------RAV1(1)                                                 <---------AHL20(2)              <----------DOF2                                          <----------DOF2             <---------ZAT18 <---------ETT(2)                        --------->At4g35610      --------->AHL20(2)   --------->ZAT18 --------->ETT(2)           ----------------->AGL1  <----------DOF2 --------->AHL20(2)--------->ALFIN1---------->ID1 ---->ANAC58            <---------At4g35610  --------->AHL20(2)>>>>>>>>>TBF1  --------->ARR11(3) ---->ANAC58        <-----------HVH21  ---------->ID1<---------AHL20(2)       <---------ARR11(3)   ccaagagtccaagaccaagaggggtcagcaaatttctctttctccttttatatatatatatagaagaagaagtggacatagacctttgtcgccaagctta  10912500                                    <---------ZAT18                                    --------->ZAT14                                    <---------ZAT14                                    --------->ZAT18                             <---------ICU4                            --------------->AGL15                            ==================================================MADS_MADS                            <---------------AGL15                   --------->DAG2       <-------TEIL     --------->ZAT18                            ---------->DOF2      <------ZmHOX2a(2) <---------ZAT18  --------->MYB52(1)   --------------->AGL15     --------->AGP1   --------------->AtSPL3            <---------ICU4                         <----- ->TOE1(3)            --------------->AtSPL8     <---------ZAT6  --------->AtMYB61             <----- ->TOE2(3) <-----------HVH21--------->ICU4<---------TOE2(3)<-----------GT1                  <<<<<<<<<   accattagatccatttcagagctaagcgtactaattagtgtactaagggtagtgtgactcattaccacctaaagtagtttcaattttcttctatttttct  10912600                                                                          <---------YAB1                                            --------->AHL20(1)            --------->ICU4                                            --------->AHL20(2)          --------->YAB1                                 >>>>>>>>>GT-1            <---------TOE2(3)                              <---------MYB46(3)         --------->MYB52(1)<---------ICU4 ---------->DOF2              ----------->GT1       --------->AHL20(2) <------ZmHOX2a(2) ----ANAC58                  --------->ALFIN1    ----------->GT1      <---------ARR11(3) ----ANAC58           --------->MYB52(1)    <---------AHL20(2) --------->GLK1(1)    ------>NtERF2   - <GT-3b              ---------->DOF2 ---------->DOF2<---------AHL20(2)--------->ARR11(3)        -----   tggcaaagagttatagtgggaaacaaagggagtggttaataaagaattaattagttaattaagggagttcaagatcataatggtgaggcctccttgttgt  10912700                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                              <---------YAB1                                        <                                           <---------YAB1                                           -                                         --------->GLK1(1)                                         --           <---------ZAT14               <---------GLK1(1)                                         --        <---------ANAC46                <---------ARR11(3)                                         --       <------ZmHOX2a(1)                --------->ARR11(3)                                <---------At4g35610 --------->DOF2                 ------>ZmHOX2a(1)                                         --------->At4g35610 ------>HVH21  ---------->DOF2----------->RAV1(2)                            ------>ZmHOX2a(1)    ---   gacaaaggaggagtgaagaaagggccatggactcctgaagaagatatcattttagtcacttacatccaagaacatggtcctggtaattggagagctgttc  10912800 <---------------AGL15 --------------->AGL15 -----------------AGL2 ---------------->AGL1 ---------------->AG -----------------AGL1 -----------------AGL3                                                            <---------AHL20(2) ---------------->AGL2                                                 <---------YAB1 ---->MYB83                     --------->At4g35610                    <---------AHL20(2) ---->MYB46(1)                <---------ICU4                         <---------CCA1(1) ------>P<---------MYB52(1)--------->YAB1                           <---------ARR11(3) --->ZmHOX2a(1)     --------->YAB1     ------>ZmHOX2a(1)            --------->ARR11(3)    --------->YAB1   ctaccaatactggtatgtataatcttcattcatcatctctcctctctacctctctatagatttgtatgtagatattatttggatttaatctatgagagtg  10912900  Previous    Next  AGI:  At3g28910.1    Description:  MYB30 (myb domain protein 30); DNA binding / transcription factor. similar to MYB96 (myb domain protein 96), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G62470.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO14983.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 10912394    to: 10914427    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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