Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->ANAC46                                                                       --------->ANAC58                                                                  ----------->HVH21                                                             ------>ZmHOX2a(1)                                                           ------>ZmHOX2a(2)                                    <---------AHL20(2)   <---------ARR11(3)                                    <---------AHL20(1)   --------->ARR11(3)                                    --------->AHL20(1)   --------->ARR14(2)  --------->ZAT14                                    --------->AHL20(2)   <---------ARR14(2)  <---------ZAT14 ------>At4g35610                --------->YAB1        ----------->ARR10--------->MYB46(3) ---->DAG2                      <---------ATHB51  <---------At5g28300  --------->ANAC58 ---->DOF2                    --------->YAB1     <-----------GT1<----------DOF2   agctgagagtaatcttctaatactcatgtgaacaataataaaatatgaaatttaccgatgatcctcctttgacacccaatgcagagatagccttgaagag  10809300                                                    --------->LBD16                                                   <---------ANAC58                         <--------                                                   <---------ANAC58                  <---------HSFB2a(2)                                                   <---------ANAC46             <---------At4g35610                                                   <---------ANAC55(1)          --------->At4g35610    <---------At4g35610                      <----------DOF2    <------ZmHOX2a(1) <----------DOF2----    <---------ZAT2                          <---------DAG2 <---------YAB1  <----------DOF2  ---------    --------->ZAT2           <---------GLK1(1)   <---------At5g28300  ---------->DOF2--------->HSFB2a(2)   gccctcagcttgttgtttcatttgagactggaactctgaagacgacccttttgccgtgtttatgaaggacatgaaagctttcagctttgagaagaaatcc  10809400                  ------>NtERF2                                                                     <               --------->LBD16<---------TOE2(3)                                                    <-              --------->HSFB2a(2)                                                                  --        <---------DAG2 <---------ARR14(2)                           --------->DAG2                 --        <----------DOF2<---------GLK1(2)                      --------->ANAC58                     <- -GLK1(1)     <---------HSFB2a(2)       --------->ANAC46      --------->ANAC58                <------ZmHOX2a(1) ----------->AtSPL8    --------->ARR14(2)              --------->TOE2(3)  ---------->DOF2   <-------- >GLK1(1)    <---------LBD16  <---------TOE1(3)   --------->YAB1  ---------->DOF2      --------->ICU4   ttgtactctcctttttccggagccatattctcaaggttatccacaaaactaagcatacctttgtaagcaaaaggctcaaagtcttgggaatttttaggaa  10809500              --------------->AGL15              <---------------AGL15              --------->TOE2(3)              ==========================================MADS_MADS      --------->ANAC55(2) ---------AHL20(2)                        --------->ARR14(2)           --------->TOE2(3)          >>> --------AHL20(1)                         <---------ARR14(2)          --------->ZAT6         -------- ------->AHL20(1)                     ----------------->AGL3         <---------YAB1          -------- ------->AHL20(2)                 <---------ANAC58                   <---------TOE2(3)      <-------- --------AHL20(2)   --------->YAB1<---------ANAC58                  <-----------GT1         --------- -TOE2(3)    ----------------->AGL1  <----------DOF2            <---------ZAT6            <------ZmHOX2a(1)   atttattcatgtaatgccttaataagaatacaccttgcgcttcatatatggtacttgatgctactagtattaacattagacatattgctataggaaatct  10809600                                             <---------AHL20(2)            <---------YAB1                                            <---------AHL20(2)            <---------AHL20(1)                              --------->CCA1(2)                           <---------AHL20(2)                             --------->ARR11(1)                         <---------YAB1                 <---------ANAC55(2)     <---------AHL20(2)           <--------HAHB4 >>>>>>>>>>>>>>LFY   ---------->DOF2   <---------RVE1(1)              --------->YAB1 ->ARR11(3)    --------->CCA1(2)      <---------ARR11(3)             <---------YAB1             <---- ->GLK1(2)    --------->ARR14(2)      --------->ARR11(3)    <---------AHL20(2)                 *TSS < -GLK1(1)     <---------ARR14(2)     <------ZmHOX2a(1)     --------->AHL20(2)               --------- >GLK1(1)<-----------HVH21   <---------ARR11(3)            <---------AHL20(2)             <---------WOX13(1)   agccattgttttgtcagatatgtaaaagaaagatttgaaggatttttttattttttgttttttaaatttctattattatttttgggtttttgaatgattt  10809700                                                                           <---------TOE1(3)                                                                    <-------TEIL<------NtERF2                 <---------ANAC46                                   ----------------->AGL3                 <---------ANAC58                                   <-----------------AGL3           --------->ARR14(2)                                       ------>ZmHOX2a(2)           <---------ARR14(2)                                      <------ZmHOX2a(2) <---------AHL20(2)           ----------->GT1                     --------->ARR14(2) -----AHL20(2)   <---------ANAC58                                 <---------ARR14(2) ---------AHL20(2) <-----------TBP                              <---------MYB46(3) >ATHB12  <------ZmHOX2a(1) --------->At4g35610           <------------CBF <---------TOE2(3)  -------   tttttaatgagaggatttggcttatatagatgctgaaaatttctaaatttgagtaagagaaattggtggatccatttaaggtcgcgagagaatagccaaa  10809800                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                          <---------AHL20(2)                                                                                      <---------AHL20(1)                                                                                      --------->AHL20(2)                                                                        --------------->AGL15                                      --------->At5g28300               <---------------AGL15                                     ----------->GT1                   ----------------->AGL3                                    <---------DEAR3(1)                 <-----------------AGL2                          <------------MYB.PH3(1)                      <-----------------AGL3                        <---------ARR14(2)                ----------->GT1             <---------AHL20(2)     --------->MYB52(1) --------->MYB52(1)               <---------TOE1(3)            --------->AHL20(1) --->DOF2               --------->ARR14(2)    <-----------RAV1(1) <---------YAB1     --------->AHL20(2)   gagagactaatggttctcatgtcccataaccgatttcgacggtgaattgtgttgctcttatggtttatatcattctatatttagagaataaattacttgt  10809900                       --------->ANAC46                       --------->ANAC58                                                             <       --------->TOE2(3)                                                                            <       --------->YAB1  --------->ANAC55(1)          --------->GLK1(2)        --------->LBD16     <--- ----------->GT1       --------->ANAC58<---------HSFB2a(2)        <---------ICU4                ----- -ANAC46   <---------------AtSPL8      --------->HSFB2a(2)       <---------YAB1           <---------ANAC55(2) -ANAC58<---------YAB1------->TEIL   <---------ANAC46     <---------YAB1   <---------LBD16--------->ANAC55(2) -ANAC55(1)<---------TOE2(3)   <---------TOE2(3)   <---------GLK1(2) <-----------GT1      <---------ANAC58 -ANAC58<---------AHL20(2)   <---------AHL20(2)    XXXXXXXXXXXXXXXXXXXX>MIR781            <---------ANAC58   aagttgtaatattaatgtactatgcacgcaatttatgttttgtagaaatgttagaatcttttgaatgcttattacattccggtttatgcattacttgatt  10810000                                                                           <---------AHL20(2)                                          --------->YAB1                   --------->AHL20(2)                                          <---------ICU4                   <---------ICU4                                         <---------ATHB51                  --------->ATHB51           --------->MYB52(2)            <---------AHL20(2)               --------->ICU4        --------->TOE2(3)             <---------AHL20(2)                <---------ICU4      <---------YAB1             <---------TOE2(3)<-------MYC3          --------->YAB1 ---------YAB1                   <---------TOE1(3)------->MYC3         --------->AHL20(2) ---------AHL20(2)               <---------YAB1  <---------O2          <---------AHL20(2) ------AHL20(2)               --------->AHL20(2) --------->O2     --------->TOE2(3)             ----- ---->AHL20(2)      <---------TOE2(3)--------->AHL20(2)           --------->YAB1     <-----------HVH21   ttataattttcattagttgattaagtttcaaatttaagattaaataatgacacatgtcgatgttgtaatcttattaattatttcatgtgtcactctctaa  10810100                <---------AHL20(2)               <---------AHL20(1)                  <---------AHL20(2)               --------->AHL20(1)              <---------------AGL15            <---------AHL20(2)                 --------------->AGL15       <-----------GT1 ----->DOF2 --------->AHL20(2)           <-------TEIL         <----------DOF2   aagttttgttgaaattatatatttgtaactagtatatgtaaggctcatactaatttaagttgaactttacttacaaattacacaattagtttctagtctt  10810200  Previous    Next  AGI:  At3g28780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28840.1); contains InterPro domain Protein of unknown function DUF1216 (InterPro:IPR009605) Range:  from: 10807148    to: 10809695    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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